RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 CCDC30Q5VVM6 783 aa18.4■□□□□ 0.54
LIMS2-205ENST00000409455 STK31Q9BXU1 1019 aa18.4■□□□□ 0.54
LIMS2-205ENST00000409455 OGFRQ9NZT2 677 aa18.4■□□□□ 0.54
LIMS2-205ENST00000409455 LIMCH1Q9UPQ0 1083 aa18.4■□□□□ 0.54
LIMS2-205ENST00000409455 FAM208AQ9UK61 1670 aaKnown RBP18.39■□□□□ 0.53
LIMS2-205ENST00000409455 AOX1Q06278 1338 aa18.39■□□□□ 0.53
LIMS2-205ENST00000409455 PHKG2P15735 406 aa18.39■□□□□ 0.53
LIMS2-205ENST00000409455 TAF3Q5VWG9 929 aa18.39■□□□□ 0.53
LIMS2-205ENST00000409455 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
LIMS2-205ENST00000409455 STRN4Q9NRL3 753 aa18.39■□□□□ 0.53
LIMS2-205ENST00000409455 RAD50Q92878 1312 aa18.38■□□□□ 0.53
LIMS2-205ENST00000409455 GNAI3P08754 354 aa18.38■□□□□ 0.53
LIMS2-205ENST00000409455 SYCP1Q15431 976 aa18.38■□□□□ 0.53
LIMS2-205ENST00000409455 SOS1Q07889 1333 aaPredicted RBP18.38■□□□□ 0.53
LIMS2-205ENST00000409455 AK2P54819 239 aa18.38■□□□□ 0.53
LIMS2-205ENST00000409455 CYP27B1O15528 508 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 NCBP1Q09161 790 aaKnown RBP18.37■□□□□ 0.53
LIMS2-205ENST00000409455 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 FAM200AQ8TCP9 573 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 TTC14Q96N46 770 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 IL25Q9H293 177 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-205ENST00000409455 PNMA6EA0A0J9YXQ4 647 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 PTGS1P23219 599 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 EVA1CP58658 441 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 HDGFL1Q5TGJ6 251 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 SNX14Q9Y5W7 946 aa18.37■□□□□ 0.53
LIMS2-205ENST00000409455 EIF2S2P20042 333 aaKnown RBP18.36■□□□□ 0.53
LIMS2-205ENST00000409455 ATP8B2P98198 1209 aa18.36■□□□□ 0.53
LIMS2-205ENST00000409455 DNM1Q05193 864 aaKnown RBP18.36■□□□□ 0.53
LIMS2-205ENST00000409455 ZNF771Q7L3S4 317 aaPredicted RBP18.36■□□□□ 0.53
LIMS2-205ENST00000409455 LARP1Q6PKG0 1096 aaKnown RBP18.35■□□□□ 0.53
LIMS2-205ENST00000409455 SMTNL1A8MU46 457 aa18.35■□□□□ 0.53
LIMS2-205ENST00000409455 RUFY3Q7L099 469 aa18.35■□□□□ 0.53
LIMS2-205ENST00000409455 ROBO1Q9Y6N7 1651 aa18.35■□□□□ 0.53
LIMS2-205ENST00000409455 OVOS2A0A0G2JMS6 1433 aa18.35■□□□□ 0.53
LIMS2-205ENST00000409455 FLIIQ13045 1269 aa18.34■□□□□ 0.53
LIMS2-205ENST00000409455 NFATC2IPQ8NCF5 419 aa18.34■□□□□ 0.53
LIMS2-205ENST00000409455 CGNQ9P2M7 1197 aaKnown RBP18.34■□□□□ 0.53
LIMS2-205ENST00000409455 SGSM2O43147 1006 aa18.33■□□□□ 0.53
LIMS2-205ENST00000409455 IGSF3O75054 1194 aa18.33■□□□□ 0.53
LIMS2-205ENST00000409455 GABPB1Q06547 395 aaPredicted RBP18.33■□□□□ 0.53
LIMS2-205ENST00000409455 C16orf45Q96MC5 204 aaPredicted RBP18.33■□□□□ 0.53
LIMS2-205ENST00000409455 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.53
LIMS2-205ENST00000409455 CARD10Q9BWT7 1032 aa18.33■□□□□ 0.53
LIMS2-205ENST00000409455 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
LIMS2-205ENST00000409455 GJB2P29033 226 aa18.33■□□□□ 0.52
LIMS2-205ENST00000409455 MAP3K11Q16584 847 aa18.33■□□□□ 0.52
LIMS2-205ENST00000409455 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
LIMS2-205ENST00000409455 ABCA3Q99758 1704 aa18.33■□□□□ 0.52
LIMS2-205ENST00000409455 HOXB7P09629 217 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 DRC7Q8IY82 874 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 CTNNA3Q9UI47 895 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 MTMR6Q9Y217 621 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 SLC39A6Q13433 755 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 NUP62CLQ9H1M0 184 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 PAXBP1Q9Y5B6 917 aa18.32■□□□□ 0.52
LIMS2-205ENST00000409455 CCDC186Q7Z3E2 898 aa18.31■□□□□ 0.52
LIMS2-205ENST00000409455 VPS37CA5D8V6 355 aaPredicted RBP18.31■□□□□ 0.52
LIMS2-205ENST00000409455 GIGYF1O75420 1035 aaPredicted RBP18.31■□□□□ 0.52
LIMS2-205ENST00000409455 CASTP20810 708 aaKnown RBP18.31■□□□□ 0.52
LIMS2-205ENST00000409455 TYRO3Q06418 890 aa18.31■□□□□ 0.52
LIMS2-205ENST00000409455 CCDC83Q8IWF9 413 aa18.31■□□□□ 0.52
LIMS2-205ENST00000409455 CCDC112Q8NEF3 446 aa18.31■□□□□ 0.52
LIMS2-205ENST00000409455 PHAXQ9H814 394 aaKnown RBP18.31■□□□□ 0.52
LIMS2-205ENST00000409455 IL1RAPL2Q9NP60 686 aa18.31■□□□□ 0.52
LIMS2-205ENST00000409455 PLEKHG2Q9H7P9 1386 aa18.31■□□□□ 0.52
LIMS2-205ENST00000409455 TNNT1P13805 278 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 LUZP1Q86V48 1076 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 ZCRB1Q8TBF4 217 aaKnown RBP18.3■□□□□ 0.52
LIMS2-205ENST00000409455 LSG1Q9H089 658 aaKnown RBP18.3■□□□□ 0.52
LIMS2-205ENST00000409455 LRRFIP2Q9Y608 721 aaKnown RBP18.3■□□□□ 0.52
LIMS2-205ENST00000409455 PRAMEF22A3QJZ6 481 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 MAP4K4O95819 1239 aaPredicted RBP18.3■□□□□ 0.52
LIMS2-205ENST00000409455 IL2RBP14784 551 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 PIP4K2BP78356 416 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 FGD1P98174 961 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 NUTM1Q86Y26 1132 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 MRVI1Q9Y6F6 885 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
LIMS2-205ENST00000409455 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
LIMS2-205ENST00000409455 SH2B1Q9NRF2 756 aaPredicted RBP18.29■□□□□ 0.52
LIMS2-205ENST00000409455 HYPKQ9NX55 129 aa18.29■□□□□ 0.52
LIMS2-205ENST00000409455 DDX41Q9UJV9 622 aaKnown RBP18.29■□□□□ 0.52
LIMS2-205ENST00000409455 KRT85P78386 507 aa18.29■□□□□ 0.52
LIMS2-205ENST00000409455 HEG1Q9ULI3 1381 aa18.29■□□□□ 0.52
LIMS2-205ENST00000409455 LARGE1O95461 756 aa18.28■□□□□ 0.52
LIMS2-205ENST00000409455 LRMPQ12912 555 aa18.28■□□□□ 0.52
LIMS2-205ENST00000409455 AHDC1Q5TGY3 1603 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-205ENST00000409455 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-205ENST00000409455 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
LIMS2-205ENST00000409455 TRIM5Q9C035 493 aa18.28■□□□□ 0.52
LIMS2-205ENST00000409455 ADAMTS7Q9UKP4 1686 aa18.28■□□□□ 0.52
LIMS2-205ENST00000409455 ANXA1P04083 346 aa18.28■□□□□ 0.52
LIMS2-205ENST00000409455 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms