RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 STK31Q9BXU1 1019 aa17.16■□□□□ 0.34
IFITM1-202ENST00000408968 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
IFITM1-202ENST00000408968 ABCC12Q96J65 1359 aa17.15■□□□□ 0.34
IFITM1-202ENST00000408968 NTSR2O95665 410 aa17.15■□□□□ 0.34
IFITM1-202ENST00000408968 ALDH1B1P30837 517 aa17.15■□□□□ 0.34
IFITM1-202ENST00000408968 CRY2Q49AN0 593 aa17.15■□□□□ 0.34
IFITM1-202ENST00000408968 ANKRD13DQ6ZTN6 518 aa17.15■□□□□ 0.34
IFITM1-202ENST00000408968 UTP14AQ9BVJ6 771 aaKnown RBP17.15■□□□□ 0.34
IFITM1-202ENST00000408968 FANCIQ9NVI1 1328 aa17.15■□□□□ 0.34
IFITM1-202ENST00000408968 DDX60Q8IY21 1712 aaKnown RBP17.14■□□□□ 0.33
IFITM1-202ENST00000408968 FAM177BA6PVY3 158 aa17.14■□□□□ 0.33
IFITM1-202ENST00000408968 TCIRG1Q13488 830 aa17.14■□□□□ 0.33
IFITM1-202ENST00000408968 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
IFITM1-202ENST00000408968 LTBP3Q9NS15 1303 aa17.14■□□□□ 0.33
IFITM1-202ENST00000408968 HSP90B1P14625 803 aaKnown RBP17.13■□□□□ 0.33
IFITM1-202ENST00000408968 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
IFITM1-202ENST00000408968 SUSD4Q5VX71 490 aa17.13■□□□□ 0.33
IFITM1-202ENST00000408968 CCDC24Q8N4L8 307 aa17.13■□□□□ 0.33
IFITM1-202ENST00000408968 C8orf58Q8NAV2 365 aa17.13■□□□□ 0.33
IFITM1-202ENST00000408968 RPGRQ92834 1020 aaKnown RBP17.13■□□□□ 0.33
IFITM1-202ENST00000408968 TSR2Q969E8 191 aaKnown RBP17.13■□□□□ 0.33
IFITM1-202ENST00000408968 LMNB1P20700 586 aa17.12■□□□□ 0.33
IFITM1-202ENST00000408968 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
IFITM1-202ENST00000408968 GRIPAP1Q4V328 841 aa17.12■□□□□ 0.33
IFITM1-202ENST00000408968 NLRP10Q86W26 655 aa17.12■□□□□ 0.33
IFITM1-202ENST00000408968 GPBP1L1Q9HC44 474 aaPredicted RBP17.12■□□□□ 0.33
IFITM1-202ENST00000408968 SH3TC1Q8TE82 1336 aa17.12■□□□□ 0.33
IFITM1-202ENST00000408968 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
IFITM1-202ENST00000408968 CCDC93Q567U6 631 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 C9orf131Q5VYM1 1079 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 NUTM1Q86Y26 1132 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 NLRP3Q96P20 1036 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 RNF181Q9P0P0 153 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 MYH3P11055 1940 aa17.11■□□□□ 0.33
IFITM1-202ENST00000408968 TRIM28Q13263 835 aaKnown RBP17.1■□□□□ 0.33
IFITM1-202ENST00000408968 CC2D2BQ6DHV5 1058 aa17.1■□□□□ 0.33
IFITM1-202ENST00000408968 RBM17Q96I25 401 aaKnown RBP17.1■□□□□ 0.33
IFITM1-202ENST00000408968 TAOK3Q9H2K8 898 aa17.1■□□□□ 0.33
IFITM1-202ENST00000408968 TRMT112Q9UI30 125 aaKnown RBP17.1■□□□□ 0.33
IFITM1-202ENST00000408968 C21orf2O43822 256 aa17.09■□□□□ 0.33
IFITM1-202ENST00000408968 HOXA10P31260 410 aaPredicted RBP17.09■□□□□ 0.33
IFITM1-202ENST00000408968 SLC10A5Q5PT55 438 aa17.09■□□□□ 0.33
IFITM1-202ENST00000408968 CRAMP1Q96RY5 1269 aa17.09■□□□□ 0.33
IFITM1-202ENST00000408968 ISCA1Q9BUE6 129 aa17.09■□□□□ 0.33
IFITM1-202ENST00000408968 KDM2BQ8NHM5 1336 aa17.09■□□□□ 0.33
IFITM1-202ENST00000408968 RTKN2Q8IZC4 609 aa17.08■□□□□ 0.32
IFITM1-202ENST00000408968 TSPYL6Q8N831 410 aa17.08■□□□□ 0.32
IFITM1-202ENST00000408968 TMX4Q9H1E5 349 aaPredicted RBP17.08■□□□□ 0.32
IFITM1-202ENST00000408968 SALL2Q9Y467 1007 aaPredicted RBP17.08■□□□□ 0.32
IFITM1-202ENST00000408968 LRRC37AA6NMS7 1700 aa17.07■□□□□ 0.32
IFITM1-202ENST00000408968 ZNF521Q96K83 1311 aa17.07■□□□□ 0.32
IFITM1-202ENST00000408968 NFKBIEO00221 500 aa17.07■□□□□ 0.32
IFITM1-202ENST00000408968 RASSF7Q02833 373 aa17.07■□□□□ 0.32
IFITM1-202ENST00000408968 NEXNQ0ZGT2 675 aa17.07■□□□□ 0.32
IFITM1-202ENST00000408968 CCDC191Q8NCU4 936 aa17.06■□□□□ 0.32
IFITM1-202ENST00000408968 PHAXQ9H814 394 aaKnown RBP17.06■□□□□ 0.32
IFITM1-202ENST00000408968 E9PSI1 815 aa17.05■□□□□ 0.32
IFITM1-202ENST00000408968 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
IFITM1-202ENST00000408968 TMC4Q7Z404 712 aa17.05■□□□□ 0.32
IFITM1-202ENST00000408968 C7orf43Q8WVR3 580 aa17.05■□□□□ 0.32
IFITM1-202ENST00000408968 METTL22Q9BUU2 404 aaPredicted RBP17.05■□□□□ 0.32
IFITM1-202ENST00000408968 PPEF1O14829 653 aaPredicted RBP17.04■□□□□ 0.32
IFITM1-202ENST00000408968 FKBP4Q02790 459 aaKnown RBP eCLIP17.04■□□□□ 0.32
IFITM1-202ENST00000408968 CWC25Q9NXE8 425 aaPredicted RBP17.04■□□□□ 0.32
IFITM1-202ENST00000408968 ZNF219Q9P2Y4 722 aaPredicted RBP17.04■□□□□ 0.32
IFITM1-202ENST00000408968 WDR90Q96KV7 1748 aa17.04■□□□□ 0.32
IFITM1-202ENST00000408968 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
IFITM1-202ENST00000408968 SLC4A2P04920 1241 aa17.03■□□□□ 0.32
IFITM1-202ENST00000408968 EXOSC9Q06265 439 aaKnown RBP17.03■□□□□ 0.32
IFITM1-202ENST00000408968 DDX46Q7L014 1031 aaKnown RBP17.03■□□□□ 0.32
IFITM1-202ENST00000408968 ZBTB38Q8NAP3 1195 aaPredicted RBP17.03■□□□□ 0.32
IFITM1-202ENST00000408968 PSMD1Q99460 953 aa17.03■□□□□ 0.32
IFITM1-202ENST00000408968 MYD88Q99836 296 aa17.03■□□□□ 0.32
IFITM1-202ENST00000408968 SNED1Q8TER0 1413 aa17.03■□□□□ 0.32
IFITM1-202ENST00000408968 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.32
IFITM1-202ENST00000408968 VAMP4O75379 141 aa17.02■□□□□ 0.32
IFITM1-202ENST00000408968 FLIIQ13045 1269 aa17.02■□□□□ 0.32
IFITM1-202ENST00000408968 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
IFITM1-202ENST00000408968 ZNF526Q8TF50 670 aaPredicted RBP17.02■□□□□ 0.32
IFITM1-202ENST00000408968 ZNF428Q96B54 188 aa17.02■□□□□ 0.32
IFITM1-202ENST00000408968 MAP3K2Q9Y2U5 619 aa17.02■□□□□ 0.32
IFITM1-202ENST00000408968 ABCC4O15439 1325 aa17.01■□□□□ 0.31
IFITM1-202ENST00000408968 PI4KAP2A4QPH2 592 aa17.01■□□□□ 0.31
IFITM1-202ENST00000408968 BBOX1O75936 387 aa17.01■□□□□ 0.31
IFITM1-202ENST00000408968 PCCAP05165 728 aaPredicted RBP17.01■□□□□ 0.31
IFITM1-202ENST00000408968 DPY19L2Q6NUT2 758 aa17.01■□□□□ 0.31
IFITM1-202ENST00000408968 PI4KAP1Q8N8J0 262 aa17.01■□□□□ 0.31
IFITM1-202ENST00000408968 SCN4AP35499 1836 aa17■□□□□ 0.31
IFITM1-202ENST00000408968 CDHR2Q9BYE9 1310 aa17■□□□□ 0.31
IFITM1-202ENST00000408968 HCLS1P14317 486 aaPredicted RBP17■□□□□ 0.31
IFITM1-202ENST00000408968 C1QTNF8P60827 252 aa17■□□□□ 0.31
IFITM1-202ENST00000408968 FKBP5Q13451 457 aaPredicted RBP17■□□□□ 0.31
IFITM1-202ENST00000408968 GRAPQ13588 217 aa17■□□□□ 0.31
IFITM1-202ENST00000408968 SF3B3Q15393 1217 aaKnown RBP17■□□□□ 0.31
IFITM1-202ENST00000408968 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
IFITM1-202ENST00000408968 GLTPD2A6NH11 291 aa16.99■□□□□ 0.31
IFITM1-202ENST00000408968 IRS4O14654 1257 aaPredicted RBP16.99■□□□□ 0.31
IFITM1-202ENST00000408968 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
IFITM1-202ENST00000408968 FAM89AQ96GI7 184 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms