RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 XAGE3Q8WTP9 111 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 NLRP3Q96P20 1036 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 MRS2Q9HD23 443 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 MBIPQ9NS73 344 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 SLX4Q8IY92 1834 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 ABCC12Q96J65 1359 aa11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 DICER1Q9UPY3 1922 aaKnown RBP11.76□□□□□ -0.53
SNORD88A-201ENST00000408314 HSP90B1P14625 803 aaKnown RBP11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 HOXA10P31260 410 aaPredicted RBP11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 AIMP1Q12904 312 aaKnown RBP11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 TCIRG1Q13488 830 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 CCDC27Q2M243 656 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 PROSER3Q2NL68 480 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 SUSD4Q5VX71 490 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 DUSP27Q5VZP5 1158 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 PLBD2Q8NHP8 589 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 NECTIN2Q92692 538 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
SNORD88A-201ENST00000408314 ANXA1P04083 346 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 ZNF853P0CG23 659 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 APLP1P51693 650 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 SMC1BQ8NDV3 1235 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 C7orf43Q8WVR3 580 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 CRAMP1Q96RY5 1269 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 CCDC88AQ3V6T2 1871 aa11.74□□□□□ -0.53
SNORD88A-201ENST00000408314 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 DDX58O95786 925 aaKnown RBP11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 SLC10A5Q5PT55 438 aa11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 NLRP10Q86W26 655 aa11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 PSMD1Q99460 953 aa11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 RRAGCQ9HB90 399 aa11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
SNORD88A-201ENST00000408314 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 IL16Q14005 1332 aa11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 KRT24Q2M2I5 525 aa11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 CCDC30Q5VVM6 783 aa11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 TMC4Q7Z404 712 aa11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 JDP2Q8WYK2 163 aa11.72□□□□□ -0.53
SNORD88A-201ENST00000408314 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.53
SNORD88A-201ENST00000408314 RIC3Q7Z5B4 369 aa11.71□□□□□ -0.53
SNORD88A-201ENST00000408314 SUPT20HQ8NEM7 779 aa11.71□□□□□ -0.53
SNORD88A-201ENST00000408314 STK31Q9BXU1 1019 aa11.71□□□□□ -0.53
SNORD88A-201ENST00000408314 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
SNORD88A-201ENST00000408314 BBOX1O75936 387 aa11.7□□□□□ -0.54
SNORD88A-201ENST00000408314 IARSP41252 1262 aaKnown RBP11.7□□□□□ -0.54
SNORD88A-201ENST00000408314 PRELPP51888 382 aa11.7□□□□□ -0.54
SNORD88A-201ENST00000408314 TRIM28Q13263 835 aaKnown RBP11.7□□□□□ -0.54
SNORD88A-201ENST00000408314 WWC1Q8IX03 1113 aa11.69□□□□□ -0.54
SNORD88A-201ENST00000408314 SYNE4Q8N205 404 aa11.69□□□□□ -0.54
SNORD88A-201ENST00000408314 ISCA1Q9BUE6 129 aa11.69□□□□□ -0.54
SNORD88A-201ENST00000408314 ZNF277Q9NRM2 450 aaPredicted RBP11.69□□□□□ -0.54
SNORD88A-201ENST00000408314 ATP6V0A2Q9Y487 856 aa11.69□□□□□ -0.54
SNORD88A-201ENST00000408314 ABCC4O15439 1325 aa11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 SCN4AP35499 1836 aa11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 EIF6P56537 245 aaKnown RBP11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 GRAPQ13588 217 aa11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 WDR63Q8IWG1 891 aa11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 GRAPLQ8TC17 118 aaPredicted RBP11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 L3MBTL3Q96JM7 780 aaPredicted RBP11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 SNED1Q8TER0 1413 aa11.68□□□□□ -0.54
SNORD88A-201ENST00000408314 ELL2O00472 640 aaPredicted RBP11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 HCLS1P14317 486 aaPredicted RBP11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 NEXNQ0ZGT2 675 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 NIM1KQ8IY84 436 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 GPC2Q8N158 579 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 LARGE2Q8N3Y3 721 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 C8orf58Q8NAV2 365 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 CCDC191Q8NCU4 936 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 LAMB2P55268 1798 aa11.67□□□□□ -0.54
SNORD88A-201ENST00000408314 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 FZD9O00144 591 aa11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 CCDC184Q52MB2 194 aa11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 PNMA8AQ86V59 439 aaPredicted RBP11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 HACL1Q9UJ83 578 aa11.66□□□□□ -0.54
SNORD88A-201ENST00000408314 IRS4O14654 1257 aaPredicted RBP11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 PPIP5K2O43314 1243 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 LMOD1P29536 600 aaPredicted RBP11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 OLFM4Q6UX06 510 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 LDHDQ86WU2 507 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 MPNDQ8N594 471 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 ZBTB38Q8NAP3 1195 aaPredicted RBP11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 TSR2Q969E8 191 aaKnown RBP11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 MYD88Q99836 296 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 MYH16Q9H6N6 1097 aa11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 CWC25Q9NXE8 425 aaPredicted RBP11.65□□□□□ -0.54
SNORD88A-201ENST00000408314 ZNF541Q9H0D2 1346 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms