RNA–Protein interactions for RNA: ENST00000408061.1

SNORD88C-201, Transcript of small nucleolar RNA, C/D box 88C, humanhuman

BASIC

Gene SNORD88C, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88C-201ENST00000408061 LY75O60449 1722 aa12.71□□□□□ -0.37
SNORD88C-201ENST00000408061 ITPK1Q13572 414 aa12.71□□□□□ -0.37
SNORD88C-201ENST00000408061 SKAP1Q86WV1 359 aa12.71□□□□□ -0.37
SNORD88C-201ENST00000408061 ZNF34Q8IZ26 560 aa12.71□□□□□ -0.37
SNORD88C-201ENST00000408061 CLASRPQ8N2M8 674 aaKnown RBP12.71□□□□□ -0.37
SNORD88C-201ENST00000408061 RPS6KA4O75676 772 aa12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 ANP32AP39687 249 aaKnown RBP12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 PDE1AP54750 535 aa12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 OS9Q13438 667 aaPredicted RBP12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 SLC27A3Q5K4L6 730 aa12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 TTC22Q5TAA0 569 aa12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 FBXO41Q8TF61 875 aa12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 ZNF330Q9Y3S2 320 aaPredicted RBP12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
SNORD88C-201ENST00000408061 TTC41PQ6P2S7 1318 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 SALL3Q9BXA9 1300 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 MX1P20591 662 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 FOXO4P98177 505 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 CASC1Q6TDU7 716 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 GPATCH3Q96I76 525 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 ARXQ96QS3 562 aa12.69□□□□□ -0.38
SNORD88C-201ENST00000408061 USP42Q9H9J4 1324 aaKnown RBP12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 ERC2O15083 957 aa12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 CSF1RP07333 972 aa12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 ADRA2BP18089 450 aa12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 LMBR1LQ6UX01 489 aa12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 TICAM2Q86XR7 235 aa12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 GPR108Q9NPR9 543 aa12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
SNORD88C-201ENST00000408061 CDC45O75419 566 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 CIAO1O76071 339 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 RXRBP28702 533 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 PTPN12Q05209 780 aaKnown RBP12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 HLFQ16534 295 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 C16orf71Q8IYS4 520 aaPredicted RBP12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 TBC1D2BQ9UPU7 963 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 BRWD3Q6RI45 1802 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 TAF1LQ8IZX4 1826 aa12.67□□□□□ -0.38
SNORD88C-201ENST00000408061 APBB1O00213 710 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 SMARCA5O60264 1052 aaPredicted RBP12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 PDE8AO60658 829 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 IL15P40933 162 aaPredicted RBP12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 CCDC57Q2TAC2 916 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 EPHA10Q5JZY3 1008 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 NARFQ9UHQ1 456 aa12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 RTCBQ9Y3I0 505 aaKnown RBP12.66□□□□□ -0.38
SNORD88C-201ENST00000408061 SH3TC1Q8TE82 1336 aa12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 MYH3P11055 1940 aa12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 PLSCR1O15162 318 aa12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 EPB41L2O43491 1005 aaKnown RBP12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 GLRX3O76003 335 aaKnown RBP12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 IFIT2P09913 472 aaKnown RBP12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 TRMT112Q9UI30 125 aaKnown RBP12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 BCORQ6W2J9 1755 aa12.65□□□□□ -0.38
SNORD88C-201ENST00000408061 SASH1O94885 1247 aa12.64□□□□□ -0.39
SNORD88C-201ENST00000408061 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
SNORD88C-201ENST00000408061 NYXQ9GZU5 481 aa12.64□□□□□ -0.39
SNORD88C-201ENST00000408061 ECHDC1Q9NTX5 307 aa12.64□□□□□ -0.39
SNORD88C-201ENST00000408061 EYA2O00167 538 aa12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 IRS4O14654 1257 aaPredicted RBP12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 ZPR1O75312 459 aa12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 IFIT5Q13325 482 aaKnown RBP12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 FAM89AQ96GI7 184 aa12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 IL1RAPL2Q9NP60 686 aa12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 RTL9Q8NET4 1388 aa12.63□□□□□ -0.39
SNORD88C-201ENST00000408061 ANKRD18BA2A2Z9 1011 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 SDSP20132 328 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 GPTP24298 496 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 CTSWP56202 376 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 SLC10A5Q5PT55 438 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 TRAPPC3LQ5T215 181 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 TTLL11Q8NHH1 800 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 C4BP0C0L5 1744 aa12.62□□□□□ -0.39
SNORD88C-201ENST00000408061 TUBGCP6Q96RT7 1819 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 GNPATO15228 680 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 TBC1D9Q6ZT07 1266 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 PTF1AQ7RTS3 328 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 CNTROBQ8N137 903 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 OTUD7AQ8TE49 926 aaPredicted RBP12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 CEP126Q9P2H0 1117 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 CHMP3Q9Y3E7 222 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 UBN2Q6ZU65 1347 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 SCN7AQ01118 1682 aa12.61□□□□□ -0.39
SNORD88C-201ENST00000408061 HIP1O00291 1037 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 REC8O95072 547 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 SSFA2P28290 1259 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
SNORD88C-201ENST00000408061 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms