RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 SLX4Q8IY92 1834 aa20.36■□□□□ 0.85
GDPD3-202ENST00000406256 SYNE4Q8N205 404 aa20.35■□□□□ 0.85
GDPD3-202ENST00000406256 ZNF428Q96B54 188 aa20.35■□□□□ 0.85
GDPD3-202ENST00000406256 CHD4Q14839 1912 aa20.35■□□□□ 0.85
GDPD3-202ENST00000406256 DDX58O95786 925 aaKnown RBP20.34■□□□□ 0.85
GDPD3-202ENST00000406256 IGKV5-2P06315 115 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 CT47B1P0C2W7 299 aaPredicted RBP20.34■□□□□ 0.85
GDPD3-202ENST00000406256 ST5P78524 1137 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 MYD88Q99836 296 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 NYXQ9GZU5 481 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 WWC3Q9ULE0 1092 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 TAF1P21675 1872 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 C3orf67Q6ZVT6 689 aa20.34■□□□□ 0.85
GDPD3-202ENST00000406256 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.84
GDPD3-202ENST00000406256 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.84
GDPD3-202ENST00000406256 ALDH1L2Q3SY69 923 aa20.33■□□□□ 0.84
GDPD3-202ENST00000406256 UTP14AQ9BVJ6 771 aaKnown RBP20.33■□□□□ 0.84
GDPD3-202ENST00000406256 BCL2L13Q9BXK5 485 aa20.33■□□□□ 0.84
GDPD3-202ENST00000406256 MYH3P11055 1940 aa20.32■□□□□ 0.84
GDPD3-202ENST00000406256 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
GDPD3-202ENST00000406256 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
GDPD3-202ENST00000406256 C2CD5Q86YS7 1000 aa20.32■□□□□ 0.84
GDPD3-202ENST00000406256 F6X3S4 739 aa20.31■□□□□ 0.84
GDPD3-202ENST00000406256 SRGNP10124 158 aa20.31■□□□□ 0.84
GDPD3-202ENST00000406256 PDE6BP35913 854 aa20.31■□□□□ 0.84
GDPD3-202ENST00000406256 RARSP54136 660 aaKnown RBP20.31■□□□□ 0.84
GDPD3-202ENST00000406256 CRY2Q49AN0 593 aa20.31■□□□□ 0.84
GDPD3-202ENST00000406256 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
GDPD3-202ENST00000406256 COL4A1P02462 1669 aa20.31■□□□□ 0.84
GDPD3-202ENST00000406256 BRPF1P55201 1214 aaPredicted RBP20.3■□□□□ 0.84
GDPD3-202ENST00000406256 CWF19L2Q2TBE0 894 aaKnown RBP20.3■□□□□ 0.84
GDPD3-202ENST00000406256 TRMT112Q9UI30 125 aaKnown RBP20.3■□□□□ 0.84
GDPD3-202ENST00000406256 NEURL1BA8MQ27 555 aa20.29■□□□□ 0.84
GDPD3-202ENST00000406256 H0YIN7 160 aa20.29■□□□□ 0.84
GDPD3-202ENST00000406256 CCDC191Q8NCU4 936 aa20.29■□□□□ 0.84
GDPD3-202ENST00000406256 PIM2Q9P1W9 311 aa20.29■□□□□ 0.84
GDPD3-202ENST00000406256 FER1L6Q2WGJ9 1857 aa20.28■□□□□ 0.84
GDPD3-202ENST00000406256 SH3TC1Q8TE82 1336 aa20.28■□□□□ 0.84
GDPD3-202ENST00000406256 NPHP1O15259 732 aa20.28■□□□□ 0.84
GDPD3-202ENST00000406256 FAM89AQ96GI7 184 aa20.28■□□□□ 0.84
GDPD3-202ENST00000406256 PDZRN3Q9UPQ7 1066 aa20.28■□□□□ 0.84
GDPD3-202ENST00000406256 SBF1O95248 1867 aa20.28■□□□□ 0.84
GDPD3-202ENST00000406256 HCLS1P14317 486 aaPredicted RBP20.27■□□□□ 0.84
GDPD3-202ENST00000406256 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.84
GDPD3-202ENST00000406256 GPR162Q16538 588 aa20.27■□□□□ 0.84
GDPD3-202ENST00000406256 BEND3Q5T5X7 828 aa20.27■□□□□ 0.84
GDPD3-202ENST00000406256 SMC4Q9NTJ3 1288 aa20.27■□□□□ 0.84
GDPD3-202ENST00000406256 CWC25Q9NXE8 425 aaPredicted RBP20.27■□□□□ 0.84
GDPD3-202ENST00000406256 PCCAP05165 728 aaPredicted RBP20.26■□□□□ 0.83
GDPD3-202ENST00000406256 STYK1Q6J9G0 422 aa20.26■□□□□ 0.83
GDPD3-202ENST00000406256 PELP1Q8IZL8 1130 aaKnown RBP20.26■□□□□ 0.83
GDPD3-202ENST00000406256 MASTLQ96GX5 879 aa20.26■□□□□ 0.83
GDPD3-202ENST00000406256 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
GDPD3-202ENST00000406256 PTPRCP08575 1304 aa20.25■□□□□ 0.83
GDPD3-202ENST00000406256 CASP7P55210 303 aa20.25■□□□□ 0.83
GDPD3-202ENST00000406256 DALRD3Q5D0E6 543 aaKnown RBP20.25■□□□□ 0.83
GDPD3-202ENST00000406256 ZBTB38Q8NAP3 1195 aaPredicted RBP20.25■□□□□ 0.83
GDPD3-202ENST00000406256 LINS1Q8NG48 757 aa20.25■□□□□ 0.83
GDPD3-202ENST00000406256 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
GDPD3-202ENST00000406256 SNED1Q8TER0 1413 aa20.24■□□□□ 0.83
GDPD3-202ENST00000406256 NPR1P16066 1061 aa20.24■□□□□ 0.83
GDPD3-202ENST00000406256 HOXA10P31260 410 aaPredicted RBP20.24■□□□□ 0.83
GDPD3-202ENST00000406256 GCKRQ14397 625 aa20.24■□□□□ 0.83
GDPD3-202ENST00000406256 RTL5Q5HYW3 569 aaPredicted RBP20.24■□□□□ 0.83
GDPD3-202ENST00000406256 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
GDPD3-202ENST00000406256 NEXNQ0ZGT2 675 aa20.23■□□□□ 0.83
GDPD3-202ENST00000406256 TTLL6Q8N841 843 aa20.23■□□□□ 0.83
GDPD3-202ENST00000406256 ZNF622Q969S3 477 aaKnown RBP eCLIP20.23■□□□□ 0.83
GDPD3-202ENST00000406256 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
GDPD3-202ENST00000406256 LRRC37AA6NMS7 1700 aa20.23■□□□□ 0.83
GDPD3-202ENST00000406256 H7C1W4 665 aa20.22■□□□□ 0.83
GDPD3-202ENST00000406256 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
GDPD3-202ENST00000406256 BCAR3O75815 825 aa20.22■□□□□ 0.83
GDPD3-202ENST00000406256 SLC51AQ86UW1 340 aa20.22■□□□□ 0.83
GDPD3-202ENST00000406256 C7orf43Q8WVR3 580 aa20.22■□□□□ 0.83
GDPD3-202ENST00000406256 PRPF40BQ6NWY9 871 aaKnown RBP20.21■□□□□ 0.83
GDPD3-202ENST00000406256 NLRP3Q96P20 1036 aa20.21■□□□□ 0.83
GDPD3-202ENST00000406256 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
GDPD3-202ENST00000406256 GRIN3BO60391 1043 aa20.21■□□□□ 0.83
GDPD3-202ENST00000406256 SF3B3Q15393 1217 aaKnown RBP20.21■□□□□ 0.83
GDPD3-202ENST00000406256 CNKSR1Q969H4 720 aa20.2■□□□□ 0.82
GDPD3-202ENST00000406256 SPEF2Q9C093 1822 aa20.19■□□□□ 0.82
GDPD3-202ENST00000406256 ABCC4O15439 1325 aa20.19■□□□□ 0.82
GDPD3-202ENST00000406256 DICER1Q9UPY3 1922 aaKnown RBP20.19■□□□□ 0.82
GDPD3-202ENST00000406256 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
GDPD3-202ENST00000406256 TNNQ9UQP3 1299 aa20.19■□□□□ 0.82
GDPD3-202ENST00000406256 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
GDPD3-202ENST00000406256 SLC4A10Q6U841 1118 aa20.18■□□□□ 0.82
GDPD3-202ENST00000406256 OLFM4Q6UX06 510 aa20.18■□□□□ 0.82
GDPD3-202ENST00000406256 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
GDPD3-202ENST00000406256 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
GDPD3-202ENST00000406256 LTBP1Q14766 1721 aa20.17■□□□□ 0.82
GDPD3-202ENST00000406256 DCAF8L1A6NGE4 600 aa20.17■□□□□ 0.82
GDPD3-202ENST00000406256 PRELPP51888 382 aa20.17■□□□□ 0.82
GDPD3-202ENST00000406256 RPGRQ92834 1020 aaKnown RBP20.17■□□□□ 0.82
GDPD3-202ENST00000406256 PLA2G12BQ9BX93 195 aa20.17■□□□□ 0.82
GDPD3-202ENST00000406256 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
GDPD3-202ENST00000406256 NFKBIEO00221 500 aa20.16■□□□□ 0.82
GDPD3-202ENST00000406256 C21orf2O43822 256 aa20.16■□□□□ 0.82
GDPD3-202ENST00000406256 PDE8AO60658 829 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms