RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SCNN1AP37088 669 aa8.92□□□□□ -0.98
HMGB1P13-201ENST00000406019 C11orf91Q3C1V1 193 aa8.92□□□□□ -0.98
HMGB1P13-201ENST00000406019 GOLGA6L1Q8N7Z2 621 aa8.92□□□□□ -0.98
HMGB1P13-201ENST00000406019 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
HMGB1P13-201ENST00000406019 NEUROD4Q9HD90 331 aa8.91□□□□□ -0.98
HMGB1P13-201ENST00000406019 OPLAHO14841 1288 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 EPXP11678 715 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 IDH3AP50213 366 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 C16orf46Q6P387 395 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 ETFBKMTQ8IXQ9 262 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 VTI1AQ96AJ9 217 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 SEPT3Q9UH03 358 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 KCNH4Q9UQ05 1017 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 USTQ9Y2C2 406 aa8.9□□□□□ -0.98
HMGB1P13-201ENST00000406019 FAM181BA6NEQ2 426 aa8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 NEURL1BA8MQ27 555 aa8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 PTCD1O75127 700 aaKnown RBP8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 MICAL2O94851 1124 aa8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 PDIA4P13667 645 aaKnown RBP8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 ADH6P28332 368 aa8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 SPEM2Q0P670 501 aa8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 IFT43Q96FT9 208 aa8.89□□□□□ -0.99
HMGB1P13-201ENST00000406019 PCBP4P57723 403 aaKnown RBP8.88□□□□□ -0.99
HMGB1P13-201ENST00000406019 EDARADDQ8WWZ3 215 aa8.88□□□□□ -0.99
HMGB1P13-201ENST00000406019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGB1P13-201ENST00000406019 SIN3BO75182 1162 aa8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 MAP3K10Q02779 954 aa8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 NAA30Q147X3 362 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 SYT9Q86SS6 491 aa8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 GALNT6Q8NCL4 622 aa8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 GSX2Q9BZM3 304 aa8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 DNMT3AQ9Y6K1 912 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P13-201ENST00000406019 ARSDP51689 593 aa8.86□□□□□ -0.99
HMGB1P13-201ENST00000406019 RAB44Q7Z6P3 723 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P13-201ENST00000406019 TREML1Q86YW5 311 aa8.86□□□□□ -0.99
HMGB1P13-201ENST00000406019 RETREG2Q8NC44 543 aa8.86□□□□□ -0.99
HMGB1P13-201ENST00000406019 ADARB2-AS1A8MUL3 147 aa8.85□□□□□ -0.99
HMGB1P13-201ENST00000406019 TNFRSF25Q93038 417 aa8.85□□□□□ -0.99
HMGB1P13-201ENST00000406019 ZBTB39O15060 712 aa8.84□□□□□ -0.99
HMGB1P13-201ENST00000406019 SNRPNP63162 240 aaKnown RBP8.84□□□□□ -0.99
HMGB1P13-201ENST00000406019 BTBD6Q96KE9 485 aa8.84□□□□□ -0.99
HMGB1P13-201ENST00000406019 C11orf16Q9NQ32 467 aa8.84□□□□□ -0.99
HMGB1P13-201ENST00000406019 PRR12Q9ULL5 1215 aa8.84□□□□□ -0.99
HMGB1P13-201ENST00000406019 KCNMB2Q9Y691 235 aa8.84□□□□□ -0.99
HMGB1P13-201ENST00000406019 EGFRP00533 1210 aa8.83□□□□□ -1
HMGB1P13-201ENST00000406019 DGKGP49619 791 aa8.83□□□□□ -1
HMGB1P13-201ENST00000406019 KCNMA1Q12791 1236 aa8.83□□□□□ -1
HMGB1P13-201ENST00000406019 ENAMQ9NRM1 1142 aa8.83□□□□□ -1
HMGB1P13-201ENST00000406019 USP20Q9Y2K6 914 aa8.83□□□□□ -1
HMGB1P13-201ENST00000406019 BRD2P25440 801 aaKnown RBP8.82□□□□□ -1
HMGB1P13-201ENST00000406019 TRIP4Q15650 581 aaPredicted RBP8.82□□□□□ -1
HMGB1P13-201ENST00000406019 LINC00114Q6XXX2 140 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 HELQQ8TDG4 1101 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 TRAIPQ9BWF2 469 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 EFCC1Q9HA90 598 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 ZFATQ9P243 1243 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 STIM2Q9P246 746 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 RTCBQ9Y3I0 505 aaKnown RBP8.82□□□□□ -1
HMGB1P13-201ENST00000406019 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
HMGB1P13-201ENST00000406019 ELOA3CA0A087WX78 387 aaPredicted RBP8.81□□□□□ -1
HMGB1P13-201ENST00000406019 ELOA3DA6NLF2 546 aaPredicted RBP8.81□□□□□ -1
HMGB1P13-201ENST00000406019 CCINQ13939 588 aa8.81□□□□□ -1
HMGB1P13-201ENST00000406019 ELOA3BQ3SY89 546 aa8.81□□□□□ -1
HMGB1P13-201ENST00000406019 CHSY3Q70JA7 882 aa8.81□□□□□ -1
HMGB1P13-201ENST00000406019 ELOA3Q8NG57 546 aa8.81□□□□□ -1
HMGB1P13-201ENST00000406019 CNTNAP5Q8WYK1 1306 aa8.8□□□□□ -1
HMGB1P13-201ENST00000406019 ZBTB7CA1YPR0 619 aa8.8□□□□□ -1
HMGB1P13-201ENST00000406019 MAP3K6O95382 1288 aa8.8□□□□□ -1
HMGB1P13-201ENST00000406019 NPR3P17342 541 aa8.8□□□□□ -1
HMGB1P13-201ENST00000406019 NEDD1Q8NHV4 660 aa8.8□□□□□ -1
HMGB1P13-201ENST00000406019 GTF3C2Q8WUA4 911 aaPredicted RBP8.8□□□□□ -1
HMGB1P13-201ENST00000406019 BHMTQ93088 406 aa8.8□□□□□ -1
HMGB1P13-201ENST00000406019 EPB42P16452 691 aa8.79□□□□□ -1
HMGB1P13-201ENST00000406019 NFKB1P19838 968 aa8.79□□□□□ -1
HMGB1P13-201ENST00000406019 COL9A3Q14050 684 aaPredicted RBP8.79□□□□□ -1
HMGB1P13-201ENST00000406019 ZAP70P43403 619 aa8.78□□□□□ -1
HMGB1P13-201ENST00000406019 MARSP56192 900 aaKnown RBP8.78□□□□□ -1
HMGB1P13-201ENST00000406019 RGL4Q8IZJ4 473 aa8.78□□□□□ -1
HMGB1P13-201ENST00000406019 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.78□□□□□ -1
HMGB1P13-201ENST00000406019 ADH7P40394 386 aa8.77□□□□□ -1.01
HMGB1P13-201ENST00000406019 MTMR3Q13615 1198 aa8.77□□□□□ -1.01
HMGB1P13-201ENST00000406019 C20orf204Q6ZNR8 217 aa8.77□□□□□ -1.01
HMGB1P13-201ENST00000406019 SCARF2Q96GP6 870 aaPredicted RBP8.77□□□□□ -1.01
HMGB1P13-201ENST00000406019 NAGPAQ9UK23 515 aa8.77□□□□□ -1.01
HMGB1P13-201ENST00000406019 ECM1Q16610 540 aa8.76□□□□□ -1.01
HMGB1P13-201ENST00000406019 ABTB2Q8N961 1025 aa8.76□□□□□ -1.01
HMGB1P13-201ENST00000406019 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 XYLBO75191 536 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 SASH3O75995 380 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 ALBP02768 609 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 HOXD8P13378 290 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 MPSTP25325 297 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 TARSP26639 723 aaKnown RBP8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 IRS1P35568 1242 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 RASSF7Q02833 373 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 ATCAYQ86WG3 371 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 PRDM6Q9NQX0 595 aa8.75□□□□□ -1.01
HMGB1P13-201ENST00000406019 DNAJB12Q9NXW2 375 aaKnown RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms