RNA–Protein interactions for RNA: ENST00000404970.3

VAMP2-202, Transcript of vesicle associated membrane protein 2, humanhuman

TSL 2 BASIC

Gene VAMP2, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-202ENST00000404970 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.48
VAMP2-202ENST00000404970 PI4KAP1Q8N8J0 262 aa18.02■□□□□ 0.48
VAMP2-202ENST00000404970 MAP3K2Q9Y2U5 619 aa18.02■□□□□ 0.48
VAMP2-202ENST00000404970 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.47
VAMP2-202ENST00000404970 KLRG2A4D1S0 409 aaPredicted RBP18.01■□□□□ 0.47
VAMP2-202ENST00000404970 HSP90AB3PQ58FF7 597 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 MYD88Q99836 296 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 METTL22Q9BUU2 404 aaPredicted RBP18.01■□□□□ 0.47
VAMP2-202ENST00000404970 CHMP4AQ9BY43 222 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 NPHP1O15259 732 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 KSR2Q6VAB6 950 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 SSH1Q8WYL5 1049 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 NYXQ9GZU5 481 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 BCS1LQ9Y276 419 aa18.01■□□□□ 0.47
VAMP2-202ENST00000404970 SRGNP10124 158 aa18■□□□□ 0.47
VAMP2-202ENST00000404970 PDE6BP35913 854 aa18■□□□□ 0.47
VAMP2-202ENST00000404970 MRPL50Q8N5N7 158 aaKnown RBP18■□□□□ 0.47
VAMP2-202ENST00000404970 UTP14AQ9BVJ6 771 aaKnown RBP18■□□□□ 0.47
VAMP2-202ENST00000404970 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
VAMP2-202ENST00000404970 TRIM28Q13263 835 aaKnown RBP17.99■□□□□ 0.47
VAMP2-202ENST00000404970 PPP1R42Q7Z4L9 355 aa17.99■□□□□ 0.47
VAMP2-202ENST00000404970 SLC51AQ86UW1 340 aa17.99■□□□□ 0.47
VAMP2-202ENST00000404970 PIM2Q9P1W9 311 aa17.99■□□□□ 0.47
VAMP2-202ENST00000404970 FER1L6Q2WGJ9 1857 aa17.98■□□□□ 0.47
VAMP2-202ENST00000404970 F6X3S4 739 aa17.98■□□□□ 0.47
VAMP2-202ENST00000404970 H0YIN7 160 aa17.98■□□□□ 0.47
VAMP2-202ENST00000404970 DDX58O95786 925 aaKnown RBP17.98■□□□□ 0.47
VAMP2-202ENST00000404970 FKBP5Q13451 457 aaPredicted RBP17.98■□□□□ 0.47
VAMP2-202ENST00000404970 CRY2Q49AN0 593 aa17.98■□□□□ 0.47
VAMP2-202ENST00000404970 SBF1O95248 1867 aa17.97■□□□□ 0.47
VAMP2-202ENST00000404970 HCLS1P14317 486 aaPredicted RBP17.97■□□□□ 0.47
VAMP2-202ENST00000404970 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
VAMP2-202ENST00000404970 JARID2Q92833 1246 aaPredicted RBP17.97■□□□□ 0.47
VAMP2-202ENST00000404970 FAM89AQ96GI7 184 aa17.97■□□□□ 0.47
VAMP2-202ENST00000404970 TRMT112Q9UI30 125 aaKnown RBP17.97■□□□□ 0.47
VAMP2-202ENST00000404970 MYH3P11055 1940 aa17.97■□□□□ 0.47
VAMP2-202ENST00000404970 GTF2E1P29083 439 aaPredicted RBP17.96■□□□□ 0.47
VAMP2-202ENST00000404970 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
VAMP2-202ENST00000404970 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
VAMP2-202ENST00000404970 SLC10A5Q5PT55 438 aa17.96■□□□□ 0.47
VAMP2-202ENST00000404970 ZNF622Q969S3 477 aaKnown RBP eCLIP17.96■□□□□ 0.472e-8■□□□□ 8.9
VAMP2-202ENST00000404970 RNF123Q5XPI4 1314 aa17.96■□□□□ 0.47
VAMP2-202ENST00000404970 SH3TC1Q8TE82 1336 aa17.96■□□□□ 0.47
VAMP2-202ENST00000404970 STYK1Q6J9G0 422 aa17.95■□□□□ 0.46
VAMP2-202ENST00000404970 DNAAF4Q8WXU2 420 aa17.95■□□□□ 0.46
VAMP2-202ENST00000404970 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
VAMP2-202ENST00000404970 NEURL1BA8MQ27 555 aa17.95■□□□□ 0.46
VAMP2-202ENST00000404970 TTLL6Q8N841 843 aa17.95■□□□□ 0.46
VAMP2-202ENST00000404970 MASTLQ96GX5 879 aa17.95■□□□□ 0.46
VAMP2-202ENST00000404970 CCDC191Q8NCU4 936 aa17.94■□□□□ 0.46
VAMP2-202ENST00000404970 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
VAMP2-202ENST00000404970 NPR1P16066 1061 aa17.93■□□□□ 0.46
VAMP2-202ENST00000404970 RARSP54136 660 aaKnown RBP17.93■□□□□ 0.46
VAMP2-202ENST00000404970 ALDH1L2Q3SY69 923 aa17.93■□□□□ 0.46
VAMP2-202ENST00000404970 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
VAMP2-202ENST00000404970 OLFM4Q6UX06 510 aa17.93■□□□□ 0.46
VAMP2-202ENST00000404970 SNED1Q8TER0 1413 aa17.93■□□□□ 0.46
VAMP2-202ENST00000404970 CWC25Q9NXE8 425 aaPredicted RBP17.93■□□□□ 0.46
VAMP2-202ENST00000404970 PDZRN3Q9UPQ7 1066 aa17.93■□□□□ 0.46
VAMP2-202ENST00000404970 GRIN3BO60391 1043 aa17.92■□□□□ 0.46
VAMP2-202ENST00000404970 PCCAP05165 728 aaPredicted RBP17.92■□□□□ 0.46
VAMP2-202ENST00000404970 CT47B1P0C2W7 299 aaPredicted RBP17.92■□□□□ 0.46
VAMP2-202ENST00000404970 BEND3Q5T5X7 828 aa17.92■□□□□ 0.46
VAMP2-202ENST00000404970 ZBTB38Q8NAP3 1195 aaPredicted RBP17.92■□□□□ 0.46
VAMP2-202ENST00000404970 SMC4Q9NTJ3 1288 aa17.92■□□□□ 0.46
VAMP2-202ENST00000404970 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
VAMP2-202ENST00000404970 SPEF2Q9C093 1822 aa17.92■□□□□ 0.46
VAMP2-202ENST00000404970 LRRC37AA6NMS7 1700 aa17.92■□□□□ 0.46
VAMP2-202ENST00000404970 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
VAMP2-202ENST00000404970 PRELPP51888 382 aa17.91■□□□□ 0.46
VAMP2-202ENST00000404970 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
VAMP2-202ENST00000404970 IRS4O14654 1257 aaPredicted RBP17.9■□□□□ 0.46
VAMP2-202ENST00000404970 C21orf2O43822 256 aa17.9■□□□□ 0.46
VAMP2-202ENST00000404970 CASP7P55210 303 aa17.9■□□□□ 0.46
VAMP2-202ENST00000404970 RASSF7Q02833 373 aa17.9■□□□□ 0.46
VAMP2-202ENST00000404970 GCKRQ14397 625 aa17.9■□□□□ 0.46
VAMP2-202ENST00000404970 LINS1Q8NG48 757 aa17.9■□□□□ 0.46
VAMP2-202ENST00000404970 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
VAMP2-202ENST00000404970 NEXNQ0ZGT2 675 aa17.89■□□□□ 0.45
VAMP2-202ENST00000404970 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
VAMP2-202ENST00000404970 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
VAMP2-202ENST00000404970 ABCC4O15439 1325 aa17.89■□□□□ 0.45
VAMP2-202ENST00000404970 H7C1W4 665 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 NFKBIEO00221 500 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 CDHR2Q9BYE9 1310 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
VAMP2-202ENST00000404970 BCAR3O75815 825 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
VAMP2-202ENST00000404970 UBE3BQ7Z3V4 1068 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 RPGRQ92834 1020 aaKnown RBP17.88■□□□□ 0.45
VAMP2-202ENST00000404970 TNNQ9UQP3 1299 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 PTPRCP08575 1304 aa17.88■□□□□ 0.45
VAMP2-202ENST00000404970 SLC4A10Q6U841 1118 aa17.87■□□□□ 0.45
VAMP2-202ENST00000404970 CRAMP1Q96RY5 1269 aa17.87■□□□□ 0.45
VAMP2-202ENST00000404970 NOB1Q9ULX3 412 aaKnown RBP17.87■□□□□ 0.45
VAMP2-202ENST00000404970 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
VAMP2-202ENST00000404970 SF3B3Q15393 1217 aaKnown RBP17.86■□□□□ 0.45
VAMP2-202ENST00000404970 DUOX1Q9NRD9 1551 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms