RNA–Protein interactions for RNA: ENST00000403792.7

SMYD3-204, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene SMYD3, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-204ENST00000403792 NIP7Q9Y221 180 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMYD3-204ENST00000403792 ELL2O00472 640 aaPredicted RBP23.8■■□□□ 1.4
SMYD3-204ENST00000403792 HSPA1AP0DMV8 641 aaKnown RBP23.8■■□□□ 1.4
SMYD3-204ENST00000403792 HSPA1BP0DMV9 641 aaKnown RBP23.8■■□□□ 1.4
SMYD3-204ENST00000403792 DIEXFQ68CQ4 756 aaKnown RBP23.8■■□□□ 1.4
SMYD3-204ENST00000403792 NBPF5PQ86XG9 351 aaPredicted RBP23.8■■□□□ 1.4
SMYD3-204ENST00000403792 NUP98P52948 1817 aa23.8■■□□□ 1.4
SMYD3-204ENST00000403792 DDNO94850 711 aaPredicted RBP23.79■■□□□ 1.4
SMYD3-204ENST00000403792 CHADLQ6NUI6 762 aa23.79■■□□□ 1.4
SMYD3-204ENST00000403792 TNS4Q8IZW8 715 aa23.79■■□□□ 1.4
SMYD3-204ENST00000403792 KLRG2A4D1S0 409 aaPredicted RBP23.78■■□□□ 1.4
SMYD3-204ENST00000403792 AIMP1Q12904 312 aaKnown RBP23.78■■□□□ 1.4
SMYD3-204ENST00000403792 WDR63Q8IWG1 891 aa23.78■■□□□ 1.4
SMYD3-204ENST00000403792 C8orf58Q8NAV2 365 aa23.78■■□□□ 1.4
SMYD3-204ENST00000403792 XAGE3Q8WTP9 111 aa23.78■■□□□ 1.4
SMYD3-204ENST00000403792 DBF4Q9UBU7 674 aaPredicted RBP23.78■■□□□ 1.4
SMYD3-204ENST00000403792 COPS6Q7L5N1 327 aa23.77■■□□□ 1.4
SMYD3-204ENST00000403792 CREBZFQ9NS37 354 aa23.77■■□□□ 1.4
SMYD3-204ENST00000403792 CACNA1SQ13698 1873 aa23.77■■□□□ 1.4
SMYD3-204ENST00000403792 FAM177BA6PVY3 158 aa23.76■■□□□ 1.39
SMYD3-204ENST00000403792 POTEIP0CG38 1075 aa23.76■■□□□ 1.39
SMYD3-204ENST00000403792 POTEJP0CG39 1038 aa23.76■■□□□ 1.39
SMYD3-204ENST00000403792 NPR1P16066 1061 aa23.76■■□□□ 1.39
SMYD3-204ENST00000403792 CCDC93Q567U6 631 aa23.75■■□□□ 1.39
SMYD3-204ENST00000403792 GIGYF2Q6Y7W6 1299 aaKnown RBP23.75■■□□□ 1.39
SMYD3-204ENST00000403792 L3MBTL3Q96JM7 780 aaPredicted RBP23.75■■□□□ 1.39
SMYD3-204ENST00000403792 GPTP24298 496 aa23.74■■□□□ 1.39
SMYD3-204ENST00000403792 TPTE2Q6XPS3 522 aa23.74■■□□□ 1.39
SMYD3-204ENST00000403792 CHMP4AQ9BY43 222 aa23.74■■□□□ 1.39
SMYD3-204ENST00000403792 HYPKQ9NX55 129 aa23.74■■□□□ 1.39
SMYD3-204ENST00000403792 FANCIQ9NVI1 1328 aa23.74■■□□□ 1.39
SMYD3-204ENST00000403792 IQCA1LA6NCM1 817 aa23.73■■□□□ 1.39
SMYD3-204ENST00000403792 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
SMYD3-204ENST00000403792 GTF2E1P29083 439 aaPredicted RBP23.72■■□□□ 1.39
SMYD3-204ENST00000403792 FKBP4Q02790 459 aaKnown RBP eCLIP23.72■■□□□ 1.39
SMYD3-204ENST00000403792 UBN2Q6ZU65 1347 aa23.71■■□□□ 1.39
SMYD3-204ENST00000403792 PASKQ96RG2 1323 aa23.71■■□□□ 1.39
SMYD3-204ENST00000403792 CCDC30Q5VVM6 783 aa23.71■■□□□ 1.39
SMYD3-204ENST00000403792 LDHDQ86WU2 507 aa23.71■■□□□ 1.39
SMYD3-204ENST00000403792 NYXQ9GZU5 481 aa23.71■■□□□ 1.39
SMYD3-204ENST00000403792 TAF1DQ9H5J8 278 aaPredicted RBP23.71■■□□□ 1.39
SMYD3-204ENST00000403792 CAPN15O75808 1086 aa23.7■■□□□ 1.38
SMYD3-204ENST00000403792 TWISTNBQ3B726 338 aaPredicted RBP23.7■■□□□ 1.38
SMYD3-204ENST00000403792 HSP90AB3PQ58FF7 597 aa23.7■■□□□ 1.38
SMYD3-204ENST00000403792 ZNF34Q8IZ26 560 aa23.7■■□□□ 1.38
SMYD3-204ENST00000403792 MYH16Q9H6N6 1097 aa23.7■■□□□ 1.38
SMYD3-204ENST00000403792 SCN4AP35499 1836 aa23.7■■□□□ 1.38
SMYD3-204ENST00000403792 ANKRD36CQ5JPF3 1778 aa23.7■■□□□ 1.38
SMYD3-204ENST00000403792 IBTKQ9P2D0 1353 aaPredicted RBP23.69■■□□□ 1.38
SMYD3-204ENST00000403792 GOLGA2Q08379 1002 aa23.69■■□□□ 1.38
SMYD3-204ENST00000403792 MKRN1Q9UHC7 482 aaKnown RBP23.69■■□□□ 1.38
SMYD3-204ENST00000403792 PARP10Q53GL7 1025 aa23.68■■□□□ 1.38
SMYD3-204ENST00000403792 ANKRD13DQ6ZTN6 518 aa23.68■■□□□ 1.38
SMYD3-204ENST00000403792 RTKN2Q8IZC4 609 aa23.68■■□□□ 1.38
SMYD3-204ENST00000403792 MIER1Q8N108 512 aa23.68■■□□□ 1.38
SMYD3-204ENST00000403792 PLBD2Q8NHP8 589 aa23.68■■□□□ 1.38
SMYD3-204ENST00000403792 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
SMYD3-204ENST00000403792 ZNF277Q9NRM2 450 aaPredicted RBP23.68■■□□□ 1.38
SMYD3-204ENST00000403792 ZNF541Q9H0D2 1346 aa23.67■■□□□ 1.38
SMYD3-204ENST00000403792 SUSD4Q5VX71 490 aa23.67■■□□□ 1.38
SMYD3-204ENST00000403792 OLFM4Q6UX06 510 aa23.67■■□□□ 1.38
SMYD3-204ENST00000403792 NUTM1Q86Y26 1132 aa23.67■■□□□ 1.38
SMYD3-204ENST00000403792 STK31Q9BXU1 1019 aa23.67■■□□□ 1.38
SMYD3-204ENST00000403792 CNTNAP1P78357 1384 aa23.66■■□□□ 1.38
SMYD3-204ENST00000403792 ABCC12Q96J65 1359 aa23.66■■□□□ 1.38
SMYD3-204ENST00000403792 ZNF521Q96K83 1311 aa23.66■■□□□ 1.38
SMYD3-204ENST00000403792 PPP1R42Q7Z4L9 355 aa23.66■■□□□ 1.38
SMYD3-204ENST00000403792 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
SMYD3-204ENST00000403792 TCERG1O14776 1098 aaKnown RBP23.65■■□□□ 1.38
SMYD3-204ENST00000403792 ITGBL1O95965 494 aaPredicted RBP23.65■■□□□ 1.38
SMYD3-204ENST00000403792 ALDH1B1P30837 517 aa23.65■■□□□ 1.38
SMYD3-204ENST00000403792 EXOSC9Q06265 439 aaKnown RBP23.65■■□□□ 1.38
SMYD3-204ENST00000403792 TCIRG1Q13488 830 aa23.65■■□□□ 1.38
SMYD3-204ENST00000403792 SNED1Q8TER0 1413 aa23.65■■□□□ 1.38
SMYD3-204ENST00000403792 FZD9O00144 591 aa23.64■■□□□ 1.37
SMYD3-204ENST00000403792 NTSR2O95665 410 aa23.64■■□□□ 1.37
SMYD3-204ENST00000403792 CRY2Q49AN0 593 aa23.64■■□□□ 1.37
SMYD3-204ENST00000403792 ADAMTSL1Q8N6G6 1762 aa23.63■■□□□ 1.37
SMYD3-204ENST00000403792 IARSP41252 1262 aaKnown RBP23.63■■□□□ 1.37
SMYD3-204ENST00000403792 RIC3Q7Z5B4 369 aa23.63■■□□□ 1.37
SMYD3-204ENST00000403792 SYNE4Q8N205 404 aa23.63■■□□□ 1.37
SMYD3-204ENST00000403792 UTP14AQ9BVJ6 771 aaKnown RBP23.63■■□□□ 1.37
SMYD3-204ENST00000403792 HACL1Q9UJ83 578 aa23.63■■□□□ 1.37
SMYD3-204ENST00000403792 NLRP10Q86W26 655 aa23.62■■□□□ 1.37
SMYD3-204ENST00000403792 RIC1Q4ADV7 1423 aa23.61■■□□□ 1.37
SMYD3-204ENST00000403792 TMEM88BA6NKF7 163 aa23.61■■□□□ 1.37
SMYD3-204ENST00000403792 DDX58O95786 925 aaKnown RBP23.61■■□□□ 1.37
SMYD3-204ENST00000403792 EPHX2P34913 555 aa23.61■■□□□ 1.37
SMYD3-204ENST00000403792 PSMD1Q99460 953 aa23.61■■□□□ 1.37
SMYD3-204ENST00000403792 RNF123Q5XPI4 1314 aa23.6■■□□□ 1.37
SMYD3-204ENST00000403792 EAPPQ56P03 285 aaPredicted RBP23.6■■□□□ 1.37
SMYD3-204ENST00000403792 ATP5J2-PTCD1G3V325 749 aa23.59■■□□□ 1.37
SMYD3-204ENST00000403792 FOXN1O15353 648 aa23.59■■□□□ 1.37
SMYD3-204ENST00000403792 VAMP4O75379 141 aa23.59■■□□□ 1.37
SMYD3-204ENST00000403792 PNMA8AQ86V59 439 aaPredicted RBP23.59■■□□□ 1.37
SMYD3-204ENST00000403792 GPC2Q8N158 579 aa23.59■■□□□ 1.37
SMYD3-204ENST00000403792 TRMT112Q9UI30 125 aaKnown RBP23.59■■□□□ 1.37
SMYD3-204ENST00000403792 SLC4A2P04920 1241 aa23.58■■□□□ 1.37
SMYD3-204ENST00000403792 VEGFBP49765 207 aa23.58■■□□□ 1.37
SMYD3-204ENST00000403792 CC2D2BQ6DHV5 1058 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms