RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 VPS53Q5VIR6 699 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 FAM184AQ8NB25 1140 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 KAZALD1Q96I82 304 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 ZSWIM6Q9HCJ5 1215 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 UBR1Q8IWV7 1749 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 GOLGA6L4A6NEF3 574 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 SLC27A2O14975 620 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 JAK2O60674 1132 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 NECTIN1Q15223 517 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 LARP1Q6PKG0 1096 aaKnown RBP14.28□□□□□ -0.12
RBM39-206ENST00000403542 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 FBXW7Q969H0 707 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 NAP1L2Q9ULW6 460 aaPredicted RBP14.28□□□□□ -0.12
RBM39-206ENST00000403542 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 FMN2Q9NZ56 1722 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 A0A087WWV3 80 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 GIGYF1O75420 1035 aaPredicted RBP14.28□□□□□ -0.12
RBM39-206ENST00000403542 DACT1Q9NYF0 836 aa14.28□□□□□ -0.12
RBM39-206ENST00000403542 TTC41PQ6P2S7 1318 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 DIP2AQ14689 1571 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 KSR2Q6VAB6 950 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 DRC7Q8IY82 874 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 PIBF1Q8WXW3 757 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 EVI5LQ96CN4 794 aa14.27□□□□□ -0.12
RBM39-206ENST00000403542 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.12
RBM39-206ENST00000403542 DNAJC2Q99543 621 aaKnown RBP14.27□□□□□ -0.12
RBM39-206ENST00000403542 GRM8O00222 908 aa14.27□□□□□ -0.13
RBM39-206ENST00000403542 BLOC1S2Q6QNY1 142 aa14.27□□□□□ -0.13
RBM39-206ENST00000403542 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.13
RBM39-206ENST00000403542 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
RBM39-206ENST00000403542 RNMTO43148 476 aaKnown RBP14.26□□□□□ -0.13
RBM39-206ENST00000403542 PLEKHO1Q53GL0 409 aaPredicted RBP14.26□□□□□ -0.13
RBM39-206ENST00000403542 EPHA10Q5JZY3 1008 aa14.26□□□□□ -0.13
RBM39-206ENST00000403542 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
RBM39-206ENST00000403542 KCNF1Q9H3M0 494 aa14.26□□□□□ -0.13
RBM39-206ENST00000403542 CEMIPQ8WUJ3 1361 aa14.26□□□□□ -0.13
RBM39-206ENST00000403542 DYNC1I1O14576 645 aa14.26□□□□□ -0.13
RBM39-206ENST00000403542 ZC3H6P61129 1189 aaKnown RBP14.26□□□□□ -0.13
RBM39-206ENST00000403542 THEMISQ8N1K5 641 aaPredicted RBP14.26□□□□□ -0.13
RBM39-206ENST00000403542 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
RBM39-206ENST00000403542 PTGS1P23219 599 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 KRT85P78386 507 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 LRMPQ12912 555 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 NRBP1Q9UHY1 535 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 AXIN2Q9Y2T1 843 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 TERF1P54274 439 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 IL17RAQ96F46 866 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 TUBGCP6Q96RT7 1819 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 MYD88Q99836 296 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 NUP62CLQ9H1M0 184 aa14.25□□□□□ -0.13
RBM39-206ENST00000403542 ATP5J2-PTCD1G3V325 749 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 PTCD1O75127 700 aaKnown RBP14.24□□□□□ -0.13
RBM39-206ENST00000403542 CCDC192P0DO97 292 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 FGD1P98174 961 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 UVSSAQ2YD98 709 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 SPATA32Q96LK8 384 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 FUCA2Q9BTY2 467 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 ANO6Q4KMQ2 910 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 MAP4K1Q92918 833 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 FTOQ9C0B1 505 aaKnown RBP eCLIP14.24□□□□□ -0.131e-8■□□□□ 10.4
RBM39-206ENST00000403542 TNMDQ9H2S6 317 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 IGKV5-2P06315 115 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 ANKRD24Q8TF21 1146 aa14.24□□□□□ -0.13
RBM39-206ENST00000403542 ERCC4Q92889 916 aaPredicted RBP14.24□□□□□ -0.13
RBM39-206ENST00000403542 ZSCAN31Q96LW9 406 aaPredicted RBP14.24□□□□□ -0.13
RBM39-206ENST00000403542 SH2B1Q9NRF2 756 aaPredicted RBP14.24□□□□□ -0.13
RBM39-206ENST00000403542 LETM1O95202 739 aaPredicted RBP14.23□□□□□ -0.13
RBM39-206ENST00000403542 TYRO3Q06418 890 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 DDX46Q7L014 1031 aaKnown RBP14.23□□□□□ -0.13
RBM39-206ENST00000403542 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 NR1I2O75469 434 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 GCP02774 474 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 TOB2Q14106 344 aaPredicted RBP14.23□□□□□ -0.13
RBM39-206ENST00000403542 COPS6Q7L5N1 327 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 MYRIPQ8NFW9 859 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 PXDNQ92626 1479 aa14.23□□□□□ -0.13
RBM39-206ENST00000403542 CBX1P83916 185 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 GUCY1B3Q02153 619 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 ERC1Q8IUD2 1116 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 ZNF710Q8N1W2 664 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 MRVI1Q9Y6F6 885 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 PXDNLA1KZ92 1463 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 CHST3Q7LGC8 479 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 NFATC2IPQ8NCF5 419 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 LINS1Q8NG48 757 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 DNAJC25Q9H1X3 360 aa14.22□□□□□ -0.13
RBM39-206ENST00000403542 SPDYE4A6NLX3 237 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 CCDC186Q7Z3E2 898 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 UBE3BQ7Z3V4 1068 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 TRIM5Q9C035 493 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 RPS6KB1P23443 525 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 TFCP2Q12800 502 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 MTX1Q13505 466 aa14.21□□□□□ -0.13
RBM39-206ENST00000403542 C16orf45Q96MC5 204 aaPredicted RBP14.21□□□□□ -0.13
RBM39-206ENST00000403542 USP42Q9H9J4 1324 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 278.9 ms