RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 BICDL1Q6ZP65 573 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 TEX13AQ9BXU3 409 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 PNNQ9H307 717 aaKnown RBP7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 TBC1D2BQ9UPU7 963 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 KIF13BQ9NQT8 1826 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 KDM3BQ7LBC6 1761 aa7.61□□□□□ -1.19
HMGB1P20-201ENST00000402555 AFDNP55196 1824 aaKnown RBP7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 ZNF316A6NFI3 1004 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 NBPF26B4DH59 902 aa7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 SNRPA1P09661 255 aaKnown RBP7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 TMPOP42166 694 aaKnown RBP7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 CCDC184Q52MB2 194 aa7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 NBPF10Q6P3W6 841 aaKnown RBP7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 NBPF15Q8N660 670 aa7.6□□□□□ -1.19
HMGB1P20-201ENST00000402555 A0A087WZG4 1122 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 C2orf72A6NCS6 295 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 GRIN3BO60391 1043 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 SERPINB2P05120 415 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 CHRNA5P30532 468 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 IL6STP40189 918 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 EIF4A1P60842 406 aaKnown RBP7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 TBC1D9BQ66K14 1250 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 DZIP3Q86Y13 1208 aaKnown RBP7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 CCDC24Q8N4L8 307 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 SCN7AQ01118 1682 aa7.59□□□□□ -1.19
HMGB1P20-201ENST00000402555 CARMIL3Q8ND23 1372 aa7.59□□□□□ -1.2
HMGB1P20-201ENST00000402555 SENP3-EIF4A1A0A087X0R7 540 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 GIGYF1O75420 1035 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 PPP1R37O75864 691 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 CAMTA2O94983 1202 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 KCNA3P22001 575 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 TGFB2P61812 414 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 NGEFQ8N5V2 710 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 ZNF784Q8NCA9 323 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 PNISRQ8TF01 805 aaKnown RBP7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 RUNDC1Q96C34 613 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 TSPYL4Q9UJ04 414 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 BCS1LQ9Y276 419 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 LAMB4A4D0S4 1761 aa7.58□□□□□ -1.2
HMGB1P20-201ENST00000402555 BCORQ6W2J9 1755 aa7.57□□□□□ -1.2
HMGB1P20-201ENST00000402555 VARS2Q5ST30 1063 aaKnown RBP7.57□□□□□ -1.2
HMGB1P20-201ENST00000402555 NRXN2Q9P2S2 1712 aa7.57□□□□□ -1.2
HMGB1P20-201ENST00000402555 BRCA1P38398 1863 aaKnown RBP7.57□□□□□ -1.2
HMGB1P20-201ENST00000402555 APAF1O14727 1248 aa7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 MYL6BP14649 208 aa7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 LMOD3Q0VAK6 560 aa7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 KRT24Q2M2I5 525 aa7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 ARSIQ5FYB1 569 aa7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 NECTIN2Q92692 538 aa7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 LAS1LQ9Y4W2 734 aaKnown RBP7.56□□□□□ -1.2
HMGB1P20-201ENST00000402555 ANKRD31Q8N7Z5 1873 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 FAM177BA6PVY3 158 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 ANXA1P04083 346 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 EIF2S2P20042 333 aaKnown RBP7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 HLFQ16534 295 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 DALRD3Q5D0E6 543 aaKnown RBP7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 PRR5LQ6MZQ0 368 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 TTLL7Q6ZT98 887 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 ARHGAP27Q6ZUM4 889 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 C2CD5Q86YS7 1000 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 PIM2Q9P1W9 311 aa7.55□□□□□ -1.2
HMGB1P20-201ENST00000402555 ATP10DQ9P241 1426 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 CHL1O00533 1208 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 NPHP1O15259 732 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 ANP32CO43423 234 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 SLC34A2O95436 690 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 PROSER3Q2NL68 480 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 ZNF687Q8N1G0 1237 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 CNBD1Q8NA66 436 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 ZNF526Q8TF50 670 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 MRS2Q9HD23 443 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 NIP7Q9Y221 180 aaKnown RBP eCLIP7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 COL11A2P13942 1736 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 ARFGEF1Q9Y6D6 1849 aa7.54□□□□□ -1.2
HMGB1P20-201ENST00000402555 H0YIN7 160 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 PDIA6Q15084 440 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 CLEC4GQ6UXB4 293 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 NBPF5PQ86XG9 351 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 TMC2Q8TDI7 906 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 KHSRPQ92945 711 aaKnown RBP eCLIP7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 ZBTB3Q9H5J0 574 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 ZNF652Q9Y2D9 606 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 ADCY9O60503 1353 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 DLEC1Q9Y238 1755 aa7.53□□□□□ -1.2
HMGB1P20-201ENST00000402555 MAP3K15Q6ZN16 1313 aa7.52□□□□□ -1.2
HMGB1P20-201ENST00000402555 NUP98P52948 1817 aa7.52□□□□□ -1.2
HMGB1P20-201ENST00000402555 GPTP24298 496 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 ST5P78524 1137 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 RASSF7Q02833 373 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 AIMP1Q12904 312 aaKnown RBP7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 KIF6Q6ZMV9 814 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 LRP10Q7Z4F1 713 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 TTLL6Q8N841 843 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 ZNF622Q969S3 477 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 BRIP1Q9BX63 1249 aa7.52□□□□□ -1.21
HMGB1P20-201ENST00000402555 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms