RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 ZKSCAN5Q9Y2L8 839 aa20.39■□□□□ 0.85
SNRNP70-202ENST00000401730 SPC24Q8NBT2 197 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 NAP1L2Q9ULW6 460 aaPredicted RBP20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 KIF13AQ9H1H9 1805 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 AOX1Q06278 1338 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 UQCRHLA0A096LP55 91 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 IGKV5-2P06315 115 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 UQCRHP07919 91 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 TSC1Q92574 1164 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 SEC62Q99442 399 aaKnown RBP20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 USP16Q9Y5T5 823 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 XRN1Q8IZH2 1706 aaKnown RBP20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 LARP1BQ659C4 914 aaKnown RBP20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 DDX11Q96FC9 970 aa20.38■□□□□ 0.85
SNRNP70-202ENST00000401730 FAM177BA6PVY3 158 aa20.37■□□□□ 0.85
SNRNP70-202ENST00000401730 ARHGEF25Q86VW2 580 aa20.37■□□□□ 0.85
SNRNP70-202ENST00000401730 BABAM1Q9NWV8 329 aa20.37■□□□□ 0.85
SNRNP70-202ENST00000401730 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.37■□□□□ 0.85
SNRNP70-202ENST00000401730 CEBPZQ03701 1054 aaKnown RBP20.37■□□□□ 0.85
SNRNP70-202ENST00000401730 ZNF330Q9Y3S2 320 aaPredicted RBP20.37■□□□□ 0.85
SNRNP70-202ENST00000401730 CCDC171Q6TFL3 1326 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 UBE3BQ7Z3V4 1068 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 CDC37L1Q7L3B6 337 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 KRT28Q7Z3Y7 464 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 RAPGEF4Q8WZA2 1011 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 MTMR6Q9Y217 621 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 ADCY5O95622 1261 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 LINS1Q8NG48 757 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 EVI5LQ96CN4 794 aa20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 ZNF496Q96IT1 587 aaPredicted RBP20.36■□□□□ 0.85
SNRNP70-202ENST00000401730 FAM208AQ9UK61 1670 aaKnown RBP20.35■□□□□ 0.85
SNRNP70-202ENST00000401730 CKAP2LQ8IYA6 745 aa20.35■□□□□ 0.85
SNRNP70-202ENST00000401730 CCDC39Q9UFE4 941 aa20.35■□□□□ 0.85
SNRNP70-202ENST00000401730 TTC41PQ6P2S7 1318 aa20.35■□□□□ 0.85
SNRNP70-202ENST00000401730 AMOTQ4VCS5 1084 aa20.35■□□□□ 0.85
SNRNP70-202ENST00000401730 BCL11BQ9C0K0 894 aaPredicted RBP20.35■□□□□ 0.85
SNRNP70-202ENST00000401730 DDX58O95786 925 aaKnown RBP20.34■□□□□ 0.85
SNRNP70-202ENST00000401730 SLC27A2O14975 620 aa20.34■□□□□ 0.85
SNRNP70-202ENST00000401730 CCDC183Q5T5S1 534 aa20.34■□□□□ 0.85
SNRNP70-202ENST00000401730 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
SNRNP70-202ENST00000401730 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
SNRNP70-202ENST00000401730 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
SNRNP70-202ENST00000401730 NECTIN1Q15223 517 aa20.33■□□□□ 0.85
SNRNP70-202ENST00000401730 ZNF790Q6PG37 636 aa20.33■□□□□ 0.85
SNRNP70-202ENST00000401730 TFCP2Q12800 502 aa20.33■□□□□ 0.84
SNRNP70-202ENST00000401730 PDIA6Q15084 440 aa20.33■□□□□ 0.84
SNRNP70-202ENST00000401730 NEUROD6Q96NK8 337 aa20.33■□□□□ 0.84
SNRNP70-202ENST00000401730 CCDC85AQ96PX6 553 aaPredicted RBP20.33■□□□□ 0.84
SNRNP70-202ENST00000401730 ALDH1L1O75891 902 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 PHF14O94880 888 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 HSP90B1P14625 803 aaKnown RBP20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 BLOC1S2Q6QNY1 142 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 DDX21Q9NR30 783 aaKnown RBP eCLIP20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 JAK2O60674 1132 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 UBE2HP62256 183 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 FGD1P98174 961 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 ZSWIM6Q9HCJ5 1215 aa20.32■□□□□ 0.84
SNRNP70-202ENST00000401730 HOXB7P09629 217 aa20.31■□□□□ 0.84
SNRNP70-202ENST00000401730 ERC1Q8IUD2 1116 aa20.31■□□□□ 0.84
SNRNP70-202ENST00000401730 VPS53Q5VIR6 699 aa20.31■□□□□ 0.84
SNRNP70-202ENST00000401730 ANKARQ7Z5J8 1434 aa20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 RGPD2P0DJD1 1756 aa20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 ARHGAP23Q9P227 1491 aa20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 LARP1Q6PKG0 1096 aaKnown RBP20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 NEURL1BA8MQ27 555 aa20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 LIG1P18858 919 aa20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 DBNDD2Q9BQY9 259 aa20.3■□□□□ 0.84
SNRNP70-202ENST00000401730 TTC6Q86TZ1 520 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 FBXW7Q969H0 707 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 GCKRQ14397 625 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 CHST3Q7LGC8 479 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 A0A087WZG4 1122 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 GOLGA6L4A6NEF3 574 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 AP5Z1O43299 807 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 ANKRD13DQ6ZTN6 518 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
SNRNP70-202ENST00000401730 MTX1Q13505 466 aa20.28■□□□□ 0.84
SNRNP70-202ENST00000401730 MAP4K1Q92918 833 aa20.28■□□□□ 0.84
SNRNP70-202ENST00000401730 SLIT1O75093 1534 aa20.28■□□□□ 0.84
SNRNP70-202ENST00000401730 ZHX1Q9UKY1 873 aaPredicted RBP20.27■□□□□ 0.84
SNRNP70-202ENST00000401730 ATP6V1DQ9Y5K8 247 aa20.27■□□□□ 0.84
SNRNP70-202ENST00000401730 A0A087WWV3 80 aa20.27■□□□□ 0.84
SNRNP70-202ENST00000401730 A0A0G2JLW4 131 aa20.27■□□□□ 0.84
SNRNP70-202ENST00000401730 A0A0U1RQG5 324 aaPredicted RBP20.27■□□□□ 0.84
SNRNP70-202ENST00000401730 PXDNLA1KZ92 1463 aa20.27■□□□□ 0.84
SNRNP70-202ENST00000401730 ZNF500O60304 480 aaPredicted RBP20.27■□□□□ 0.83
SNRNP70-202ENST00000401730 TIMM10P62072 90 aa20.27■□□□□ 0.83
SNRNP70-202ENST00000401730 GUCY1B3Q02153 619 aa20.26■□□□□ 0.83
SNRNP70-202ENST00000401730 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
SNRNP70-202ENST00000401730 LUZP1Q86V48 1076 aa20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 HS1BP3Q53T59 392 aa20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 LMBR1LQ6UX01 489 aa20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 ZNF594Q96JF6 807 aaPredicted RBP20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 LTN1O94822 1766 aa20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 TATP17735 454 aaPredicted RBP20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 CCT2P78371 535 aaKnown RBP20.25■□□□□ 0.83
SNRNP70-202ENST00000401730 CHMP4AQ9BY43 222 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms