RNA–Protein interactions for RNA: ENST00000399220.2

CX3CR1-202, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CR1, Length 3,106 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-202ENST00000399220 TTLL7Q6ZT98 887 aa8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 BICC1Q9H694 974 aaKnown RBP8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 MX1P20591 662 aa8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 PRIM1P49642 420 aaKnown RBP8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 ZNF34Q8IZ26 560 aa8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 PI4K2BQ8TCG2 481 aa8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 USP21Q9UK80 565 aa8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 TNS1Q9HBL0 1735 aaKnown RBP8.43□□□□□ -1.06
CX3CR1-202ENST00000399220 ABCC12Q96J65 1359 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 HSPA1LP34931 641 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 TRPC5Q9UL62 973 aaPredicted RBP8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 DOCK2Q92608 1830 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 HMGB2P26583 209 aaKnown RBP8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 PTPN12Q05209 780 aaKnown RBP8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 KIF6Q6ZMV9 814 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 TBC1D9Q6ZT07 1266 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 C16orf71Q8IYS4 520 aaPredicted RBP8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 ZBTB38Q8NAP3 1195 aaPredicted RBP8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 NGLY1Q96IV0 654 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 BCL11AQ9H165 835 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 CCDC87Q9NVE4 849 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 USP35Q9P2H5 1018 aa8.42□□□□□ -1.06
CX3CR1-202ENST00000399220 NRXN2Q9P2S2 1712 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 LOC102724428A0A0B4J2F2 783 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 SASH1O94885 1247 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 SDSP20132 328 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 SIK1P57059 783 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 EPHA10Q5JZY3 1008 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 ZBTB47Q9UFB7 747 aaPredicted RBP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 EXOC6BQ9Y2D4 811 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 AIMP1Q12904 312 aaKnown RBP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 CLEC4GQ6UXB4 293 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 SNX21Q969T3 373 aa8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
CX3CR1-202ENST00000399220 A0A087WZG4 1122 aa8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 PTCD1O75127 700 aaKnown RBP8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 SURF6O75683 361 aaKnown RBP8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 OTUD7AQ8TE49 926 aaPredicted RBP8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 C8orf37Q96NL8 207 aa8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 ZNF609O15014 1411 aa8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 AFF2P51816 1311 aa8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 MYH7P12883 1935 aa8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 SMARCA5O60264 1052 aaPredicted RBP8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 KIAA1551Q9HCM1 1747 aa8.4□□□□□ -1.06
CX3CR1-202ENST00000399220 ITPK1Q13572 414 aa8.4□□□□□ -1.07
CX3CR1-202ENST00000399220 NLRP10Q86W26 655 aa8.4□□□□□ -1.07
CX3CR1-202ENST00000399220 ZBTB1Q9Y2K1 713 aa8.4□□□□□ -1.07
CX3CR1-202ENST00000399220 CAMTA2O94983 1202 aa8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 PARP10Q53GL7 1025 aa8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 C22orf23Q9BZE7 217 aa8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 GLRX3O76003 335 aaKnown RBP8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 CRKLP46109 303 aaKnown RBP8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 FAM98CQ17RN3 349 aaKnown RBP8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 KIF2CQ99661 725 aa8.39□□□□□ -1.07
CX3CR1-202ENST00000399220 ERC2O15083 957 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 ATG9AQ7Z3C6 839 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 CLASRPQ8N2M8 674 aaKnown RBP8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 AKAP11Q9UKA4 1901 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 LRRC37AA6NMS7 1700 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 CASC1Q6TDU7 716 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 USP26Q9BXU7 913 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 ECHDC1Q9NTX5 307 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 IL15P40933 162 aaPredicted RBP8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 G3BP1Q13283 466 aaKnown RBP eCLIP8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 UBE3BQ7Z3V4 1068 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 KCNB2Q92953 911 aa8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 ZNF512BQ96KM6 892 aaPredicted RBP8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 RBM42Q9BTD8 480 aaKnown RBP8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
CX3CR1-202ENST00000399220 RAD50Q92878 1312 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 HSP90B1P14625 803 aaKnown RBP8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 CHMLP26374 656 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 ANAPC15P60006 121 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 GPATCH3Q96I76 525 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 ATP5JP18859 108 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 DZIP3Q86Y13 1208 aaKnown RBP8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 UBN2Q6ZU65 1347 aa8.37□□□□□ -1.07
CX3CR1-202ENST00000399220 REC8O95072 547 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 PIP4K2AP48426 406 aaPredicted RBP8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 HLFQ16534 295 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 SLC10A5Q5PT55 438 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 LINC00116Q8NCU8 138 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 ESYT1Q9BSJ8 1104 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 ATP5J2-PTCD1G3V325 749 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 EYA2O00167 538 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 HIP1O00291 1037 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 RPS6KA4O75676 772 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 TNNI3KQ59H18 835 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 EAF2Q96CJ1 260 aaPredicted RBP8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 FPGT-TNNI3KV9GXZ4 949 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 PDE8AO60658 829 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 LMBR1LQ6UX01 489 aa8.36□□□□□ -1.07
CX3CR1-202ENST00000399220 CNTROBQ8N137 903 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms