RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 LINS1Q8NG48 757 aa11.25□□□□□ -0.61
BRCC3-206ENST00000399042 TRMT112Q9UI30 125 aaKnown RBP11.25□□□□□ -0.61
BRCC3-206ENST00000399042 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
BRCC3-206ENST00000399042 PARP3Q9Y6F1 533 aa11.25□□□□□ -0.61
BRCC3-206ENST00000399042 LAMB4A4D0S4 1761 aa11.25□□□□□ -0.61
BRCC3-206ENST00000399042 ALDH1L1O75891 902 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 ZBTB7AO95365 584 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 GYS1P13807 737 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 POLD1P28340 1107 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-206ENST00000399042 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
BRCC3-206ENST00000399042 PARP10Q53GL7 1025 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 RTL5Q5HYW3 569 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-206ENST00000399042 TBC1D9BQ66K14 1250 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 UTP14AQ9BVJ6 771 aaKnown RBP11.24□□□□□ -0.61
BRCC3-206ENST00000399042 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 TNNQ9UQP3 1299 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 ADCY9O60503 1353 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 ZNF831Q5JPB2 1677 aa11.24□□□□□ -0.61
BRCC3-206ENST00000399042 HSP90B1P14625 803 aaKnown RBP11.23□□□□□ -0.61
BRCC3-206ENST00000399042 BEND3Q5T5X7 828 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 TPTE2Q6XPS3 522 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 PLCD3Q8N3E9 789 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 CCDC191Q8NCU4 936 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 SLC16A10Q8TF71 515 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 NYXQ9GZU5 481 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 DDX19BQ9UMR2 479 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 FARP1Q9Y4F1 1045 aaPredicted RBP11.23□□□□□ -0.61
BRCC3-206ENST00000399042 RGPD3A6NKT7 1758 aaPredicted RBP11.23□□□□□ -0.61
BRCC3-206ENST00000399042 RGPD4Q7Z3J3 1758 aa11.23□□□□□ -0.61
BRCC3-206ENST00000399042 NEURL1BA8MQ27 555 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 RGL2O15211 777 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 ABCC4O15439 1325 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 MMP10P09238 476 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
BRCC3-206ENST00000399042 RLBP1P12271 317 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 ST5P78524 1137 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 MVPQ14764 893 aaKnown RBP11.22□□□□□ -0.61
BRCC3-206ENST00000399042 NFIXQ14938 502 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
BRCC3-206ENST00000399042 NLRP10Q86W26 655 aa11.22□□□□□ -0.61
BRCC3-206ENST00000399042 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-206ENST00000399042 IGKV5-2P06315 115 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 GNAI3P08754 354 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 GCKRQ14397 625 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 UBE3BQ7Z3V4 1068 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 ZNF34Q8IZ26 560 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 KLHL34Q8N239 644 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 CNBD1Q8NA66 436 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 JARID2Q92833 1246 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-206ENST00000399042 CRBNQ96SW2 442 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 ISCA1Q9BUE6 129 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 PDGFDQ9GZP0 370 aaPredicted RBP11.21□□□□□ -0.61
BRCC3-206ENST00000399042 MTFR1LQ9H019 292 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 BCL2L12Q9HB09 334 aa11.21□□□□□ -0.61
BRCC3-206ENST00000399042 CICQ96RK0 1608 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-206ENST00000399042 CARMIL3Q8ND23 1372 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 SH3TC1Q8TE82 1336 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 MYH14Q7Z406 1995 aaKnown RBP11.2□□□□□ -0.62
BRCC3-206ENST00000399042 GRM8O00222 908 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 SERPINB2P05120 415 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
BRCC3-206ENST00000399042 SUSD4Q5VX71 490 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 FAM89AQ96GI7 184 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 PPP1R1BQ9UD71 204 aaPredicted RBP11.2□□□□□ -0.62
BRCC3-206ENST00000399042 CHMP3Q9Y3E7 222 aa11.2□□□□□ -0.62
BRCC3-206ENST00000399042 TAF1LQ8IZX4 1826 aa11.19□□□□□ -0.62
BRCC3-206ENST00000399042 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
BRCC3-206ENST00000399042 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
BRCC3-206ENST00000399042 ZBTB38Q8NAP3 1195 aaPredicted RBP11.19□□□□□ -0.62
BRCC3-206ENST00000399042 ATP10DQ9P241 1426 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 NUP188Q5SRE5 1749 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 RREB1Q92766 1687 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 RNF123Q5XPI4 1314 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 UBN2Q6ZU65 1347 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 IRS4O14654 1257 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-206ENST00000399042 GNAI2P04899 355 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 PCCAP05165 728 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-206ENST00000399042 EXOC6Q8TAG9 804 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 MEIS3Q99687 375 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 SPON1Q9HCB6 807 aa11.18□□□□□ -0.62
BRCC3-206ENST00000399042 POLRMTO00411 1230 aaKnown RBP11.17□□□□□ -0.62
BRCC3-206ENST00000399042 NBPF7P0C2Y1 421 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-206ENST00000399042 HCLS1P14317 486 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-206ENST00000399042 TM4SF1P30408 202 aa11.17□□□□□ -0.62
BRCC3-206ENST00000399042 ERFEQ4G0M1 354 aa11.17□□□□□ -0.62
BRCC3-206ENST00000399042 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
BRCC3-206ENST00000399042 USP44Q9H0E7 712 aa11.17□□□□□ -0.62
BRCC3-206ENST00000399042 H7C1W4 665 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 ZBTB7BO15156 539 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-206ENST00000399042 NTSR2O95665 410 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 DDR1Q08345 913 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 TAF7LQ5H9L4 462 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 CCDC85AQ96PX6 553 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-206ENST00000399042 C1orf115Q9H7X2 142 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 LRRFIP2Q9Y608 721 aaKnown RBP11.16□□□□□ -0.62
BRCC3-206ENST00000399042 PXDNLA1KZ92 1463 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 CACNA1FO60840 1977 aa11.16□□□□□ -0.62
BRCC3-206ENST00000399042 UBR3Q6ZT12 1888 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 369 ms