RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
BRCC3-205ENST00000399026 SLC16A10Q8TF71 515 aa10.89□□□□□ -0.67
BRCC3-205ENST00000399026 KHSRPQ92945 711 aaKnown RBP eCLIP10.89□□□□□ -0.671e-7■■■□□ 15.3
BRCC3-205ENST00000399026 TSR2Q969E8 191 aaKnown RBP10.89□□□□□ -0.67
BRCC3-205ENST00000399026 CFAP44Q96MT7 982 aa10.89□□□□□ -0.67
BRCC3-205ENST00000399026 POLD1P28340 1107 aa10.88□□□□□ -0.67
BRCC3-205ENST00000399026 VARS2Q5ST30 1063 aaKnown RBP10.88□□□□□ -0.67
BRCC3-205ENST00000399026 NECTIN2Q92692 538 aa10.88□□□□□ -0.67
BRCC3-205ENST00000399026 TEX13AQ9BXU3 409 aaPredicted RBP10.88□□□□□ -0.67
BRCC3-205ENST00000399026 IFT57Q9NWB7 429 aa10.88□□□□□ -0.67
BRCC3-205ENST00000399026 AFDNP55196 1824 aaKnown RBP10.88□□□□□ -0.67
BRCC3-205ENST00000399026 KIAA1551Q9HCM1 1747 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 ZNF853P0CG23 659 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 GYS1P13807 737 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 EIF5P55010 431 aaKnown RBP10.87□□□□□ -0.67
BRCC3-205ENST00000399026 GNAI1P63096 354 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 CALD1Q05682 793 aaKnown RBP10.87□□□□□ -0.67
BRCC3-205ENST00000399026 CCDC27Q2M243 656 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 USPL1Q5W0Q7 1092 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 NBPF10Q6P3W6 841 aaKnown RBP10.87□□□□□ -0.67
BRCC3-205ENST00000399026 NBPF15Q8N660 670 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 RYDENQ9NUL5 291 aaKnown RBP10.87□□□□□ -0.67
BRCC3-205ENST00000399026 BABAM1Q9NWV8 329 aa10.87□□□□□ -0.67
BRCC3-205ENST00000399026 SLC34A2O95436 690 aa10.86□□□□□ -0.67
BRCC3-205ENST00000399026 ANXA1P04083 346 aa10.86□□□□□ -0.67
BRCC3-205ENST00000399026 EIF2S2P20042 333 aaKnown RBP10.86□□□□□ -0.67
BRCC3-205ENST00000399026 IL6STP40189 918 aaPredicted RBP10.86□□□□□ -0.67
BRCC3-205ENST00000399026 ARXQ96QS3 562 aa10.86□□□□□ -0.67
BRCC3-205ENST00000399026 NRXN2Q9P2S2 1712 aa10.86□□□□□ -0.67
BRCC3-205ENST00000399026 KIF13BQ9NQT8 1826 aa10.86□□□□□ -0.67
BRCC3-205ENST00000399026 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 ANKRD36CQ5JPF3 1778 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 GTPBP6O43824 516 aaPredicted RBP10.85□□□□□ -0.67
BRCC3-205ENST00000399026 ZPR1O75312 459 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 MMP10P09238 476 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 MYL6BP14649 208 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 PROSER3Q2NL68 480 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 NGEFQ8N5V2 710 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 FHDC1Q9C0D6 1143 aaPredicted RBP10.85□□□□□ -0.67
BRCC3-205ENST00000399026 BCL2L12Q9HB09 334 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
BRCC3-205ENST00000399026 NARFQ9UHQ1 456 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 TBC1D2BQ9UPU7 963 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 NUP98P52948 1817 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 N4BP2Q86UW6 1770 aaPredicted RBP10.85□□□□□ -0.67
BRCC3-205ENST00000399026 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
BRCC3-205ENST00000399026 ELL2O00472 640 aaPredicted RBP10.84□□□□□ -0.67
BRCC3-205ENST00000399026 DDR1Q08345 913 aa10.84□□□□□ -0.67
BRCC3-205ENST00000399026 HDGFL1Q5TGJ6 251 aa10.84□□□□□ -0.67
BRCC3-205ENST00000399026 DUSP27Q5VZP5 1158 aa10.84□□□□□ -0.67
BRCC3-205ENST00000399026 DZIP3Q86Y13 1208 aaKnown RBP10.84□□□□□ -0.67
BRCC3-205ENST00000399026 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
BRCC3-205ENST00000399026 IL16Q14005 1332 aa10.84□□□□□ -0.67
BRCC3-205ENST00000399026 ZNF521Q96K83 1311 aa10.84□□□□□ -0.67
BRCC3-205ENST00000399026 A0A087WZG4 1122 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 CAMTA2O94983 1202 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 BICDL1Q6ZP65 573 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
BRCC3-205ENST00000399026 TSPYL6Q8N831 410 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 C8orf58Q8NAV2 365 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 CHPF2Q9P2E5 772 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 COL11A2P13942 1736 aaPredicted RBP10.83□□□□□ -0.68
BRCC3-205ENST00000399026 ANKRD31Q8N7Z5 1873 aa10.83□□□□□ -0.68
BRCC3-205ENST00000399026 CARMIL3Q8ND23 1372 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 FOXK1P85037 733 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 TTLL7Q6ZT98 887 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 WDR63Q8IWG1 891 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 NLGN1Q8N2Q7 840 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 NLGN2Q8NFZ4 835 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 TNRC6CQ9HCJ0 1690 aaKnown RBP10.82□□□□□ -0.68
BRCC3-205ENST00000399026 ERBB4Q15303 1308 aa10.82□□□□□ -0.68
BRCC3-205ENST00000399026 POLRMTO00411 1230 aaKnown RBP10.81□□□□□ -0.68
BRCC3-205ENST00000399026 HOXB7P09629 217 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 NUDT7P0C024 238 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 NFIXQ14938 502 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 PDIA6Q15084 440 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 TBC1D9BQ66K14 1250 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 ZBTB3Q9H5J0 574 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 PARP3Q9Y6F1 533 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 PXDNLA1KZ92 1463 aa10.81□□□□□ -0.68
BRCC3-205ENST00000399026 DLEC1Q9Y238 1755 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 TCERG1O14776 1098 aaKnown RBP10.8□□□□□ -0.68
BRCC3-205ENST00000399026 DSG2Q14126 1118 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 HLFQ16534 295 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 KIF6Q6ZMV9 814 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 LRP10Q7Z4F1 713 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 PLPP6Q8IY26 295 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 SYT17Q9BSW7 474 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 WWC3Q9ULE0 1092 aa10.8□□□□□ -0.68
BRCC3-205ENST00000399026 BRCA1P38398 1863 aaKnown RBP10.8□□□□□ -0.68
BRCC3-205ENST00000399026 CACNA1SQ13698 1873 aa10.79□□□□□ -0.68
BRCC3-205ENST00000399026 EXOSC9Q06265 439 aaKnown RBP10.79□□□□□ -0.68
BRCC3-205ENST00000399026 AIMP1Q12904 312 aaKnown RBP10.79□□□□□ -0.68
BRCC3-205ENST00000399026 TWISTNBQ3B726 338 aaPredicted RBP10.79□□□□□ -0.68
BRCC3-205ENST00000399026 XAGE3Q8WTP9 111 aa10.79□□□□□ -0.68
BRCC3-205ENST00000399026 MAP3K15Q6ZN16 1313 aa10.79□□□□□ -0.68
BRCC3-205ENST00000399026 ATP10DQ9P241 1426 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms