RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 NUP98P52948 1817 aa28.56■■■□□ 2.16
CDH23-206ENST00000398842 NHSQ6T4R5 1651 aa28.56■■■□□ 2.16
CDH23-206ENST00000398842 MFAP1P55081 439 aaKnown RBP28.56■■■□□ 2.16
CDH23-206ENST00000398842 CCDC87Q9NVE4 849 aa28.56■■■□□ 2.16
CDH23-206ENST00000398842 MYH14Q7Z406 1995 aaKnown RBP28.56■■■□□ 2.16
CDH23-206ENST00000398842 RFX5P48382 616 aaPredicted RBP28.55■■■□□ 2.16
CDH23-206ENST00000398842 FOXO4P98177 505 aa28.55■■■□□ 2.16
CDH23-206ENST00000398842 CRKLP46109 303 aaKnown RBP28.55■■■□□ 2.16
CDH23-206ENST00000398842 EIF5P55010 431 aaKnown RBP28.55■■■□□ 2.16
CDH23-206ENST00000398842 RBM6P78332 1123 aaKnown RBP28.54■■■□□ 2.16
CDH23-206ENST00000398842 HLFQ16534 295 aa28.54■■■□□ 2.16
CDH23-206ENST00000398842 COPRSQ9NQ92 184 aa28.54■■■□□ 2.16
CDH23-206ENST00000398842 FAM182BQ5T319 152 aa28.53■■■□□ 2.16
CDH23-206ENST00000398842 TSHZ3Q63HK5 1081 aa28.53■■■□□ 2.16
CDH23-206ENST00000398842 NUTM1Q86Y26 1132 aa28.53■■■□□ 2.16
CDH23-206ENST00000398842 BTAF1O14981 1849 aa28.53■■■□□ 2.16
CDH23-206ENST00000398842 ERVV-1B6SEH8 477 aa28.52■■■□□ 2.16
CDH23-206ENST00000398842 G3BP1Q13283 466 aaKnown RBP eCLIP28.52■■■□□ 2.16
CDH23-206ENST00000398842 ARXQ96QS3 562 aa28.52■■■□□ 2.16
CDH23-206ENST00000398842 SASH1O94885 1247 aa28.52■■■□□ 2.16
CDH23-206ENST00000398842 HSP90AB3PQ58FF7 597 aa28.52■■■□□ 2.16
CDH23-206ENST00000398842 DZIP3Q86Y13 1208 aaKnown RBP28.52■■■□□ 2.16
CDH23-206ENST00000398842 LMBR1LQ6UX01 489 aa28.51■■■□□ 2.15
CDH23-206ENST00000398842 USP42Q9H9J4 1324 aaKnown RBP28.51■■■□□ 2.15
CDH23-206ENST00000398842 PTPN12Q05209 780 aaKnown RBP28.5■■■□□ 2.15
CDH23-206ENST00000398842 PTF1AQ7RTS3 328 aa28.5■■■□□ 2.15
CDH23-206ENST00000398842 CLASRPQ8N2M8 674 aaKnown RBP28.5■■■□□ 2.15
CDH23-206ENST00000398842 KLHDC4Q8TBB5 520 aa28.5■■■□□ 2.15
CDH23-206ENST00000398842 C22orf23Q9BZE7 217 aa28.5■■■□□ 2.15
CDH23-206ENST00000398842 SBF2Q86WG5 1849 aa28.5■■■□□ 2.15
CDH23-206ENST00000398842 RTL5Q5HYW3 569 aaPredicted RBP28.5■■■□□ 2.15
CDH23-206ENST00000398842 POTEAQ6S8J7 498 aa28.5■■■□□ 2.15
CDH23-206ENST00000398842 PCCAP05165 728 aaPredicted RBP28.49■■■□□ 2.15
CDH23-206ENST00000398842 TBC1D2BQ9UPU7 963 aa28.49■■■□□ 2.15
CDH23-206ENST00000398842 RXRBP28702 533 aa28.48■■■□□ 2.15
CDH23-206ENST00000398842 SIL1Q9H173 461 aa28.48■■■□□ 2.15
CDH23-206ENST00000398842 NLRP10Q86W26 655 aa28.47■■■□□ 2.15
CDH23-206ENST00000398842 PI4K2BQ8TCG2 481 aa28.47■■■□□ 2.15
CDH23-206ENST00000398842 ZBTB38Q8NAP3 1195 aaPredicted RBP28.47■■■□□ 2.15
CDH23-206ENST00000398842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.47■■■□□ 2.15
CDH23-206ENST00000398842 TTC41PQ6P2S7 1318 aa28.46■■■□□ 2.15
CDH23-206ENST00000398842 EIF5BO60841 1220 aaKnown RBP28.45■■■□□ 2.15
CDH23-206ENST00000398842 PLA2G12BQ9BX93 195 aa28.45■■■□□ 2.15
CDH23-206ENST00000398842 GPTP24298 496 aa28.44■■■□□ 2.14
CDH23-206ENST00000398842 RBM25P49756 843 aaKnown RBP28.44■■■□□ 2.14
CDH23-206ENST00000398842 LINC00116Q8NCU8 138 aa28.44■■■□□ 2.14
CDH23-206ENST00000398842 CDHR2Q9BYE9 1310 aa28.44■■■□□ 2.14
CDH23-206ENST00000398842 ZNF34Q8IZ26 560 aa28.43■■■□□ 2.14
CDH23-206ENST00000398842 FAM89AQ96GI7 184 aa28.43■■■□□ 2.14
CDH23-206ENST00000398842 BRWD3Q6RI45 1802 aa28.43■■■□□ 2.14
CDH23-206ENST00000398842 CASC1Q6TDU7 716 aa28.42■■■□□ 2.14
CDH23-206ENST00000398842 EAF2Q96CJ1 260 aaPredicted RBP28.42■■■□□ 2.14
CDH23-206ENST00000398842 AK9Q5TCS8 1911 aa28.42■■■□□ 2.14
CDH23-206ENST00000398842 IFIT2P09913 472 aaKnown RBP28.42■■■□□ 2.14
CDH23-206ENST00000398842 AACSQ86V21 672 aa28.42■■■□□ 2.14
CDH23-206ENST00000398842 LY75O60449 1722 aa28.42■■■□□ 2.14
CDH23-206ENST00000398842 CAMTA2O94983 1202 aa28.41■■■□□ 2.14
CDH23-206ENST00000398842 KRT27Q7Z3Y8 459 aa28.41■■■□□ 2.14
CDH23-206ENST00000398842 CHMP3Q9Y3E7 222 aa28.41■■■□□ 2.14
CDH23-206ENST00000398842 BCORQ6W2J9 1755 aa28.4■■■□□ 2.14
CDH23-206ENST00000398842 UBN2Q6ZU65 1347 aa28.4■■■□□ 2.14
CDH23-206ENST00000398842 CNTNAP4Q9C0A0 1308 aa28.4■■■□□ 2.14
CDH23-206ENST00000398842 TRIM6-TRIM34B2RNG4 842 aa28.39■■■□□ 2.14
CDH23-206ENST00000398842 ECHDC1Q9NTX5 307 aa28.39■■■□□ 2.14
CDH23-206ENST00000398842 MYH3P11055 1940 aa28.39■■■□□ 2.14
CDH23-206ENST00000398842 GLRX3O76003 335 aaKnown RBP28.39■■■□□ 2.13
CDH23-206ENST00000398842 CSF1RP07333 972 aa28.38■■■□□ 2.13
CDH23-206ENST00000398842 RILPL2Q969X0 211 aa28.38■■■□□ 2.13
CDH23-206ENST00000398842 GPATCH3Q96I76 525 aa28.38■■■□□ 2.13
CDH23-206ENST00000398842 ERC2O15083 957 aa28.37■■■□□ 2.13
CDH23-206ENST00000398842 SYNE4Q8N205 404 aa28.37■■■□□ 2.13
CDH23-206ENST00000398842 KCNQ4P56696 695 aa28.37■■■□□ 2.13
CDH23-206ENST00000398842 TFCP2Q12800 502 aa28.37■■■□□ 2.13
CDH23-206ENST00000398842 ATG9AQ7Z3C6 839 aa28.36■■■□□ 2.13
CDH23-206ENST00000398842 CCDC8Q9H0W5 538 aaPredicted RBP28.36■■■□□ 2.13
CDH23-206ENST00000398842 TAF1LQ8IZX4 1826 aa28.35■■■□□ 2.13
CDH23-206ENST00000398842 RC3H1Q5TC82 1133 aaKnown RBP28.35■■■□□ 2.13
CDH23-206ENST00000398842 TRMT112Q9UI30 125 aaKnown RBP28.35■■■□□ 2.13
CDH23-206ENST00000398842 CHMLP26374 656 aa28.34■■■□□ 2.13
CDH23-206ENST00000398842 TNNI3KQ59H18 835 aa28.34■■■□□ 2.13
CDH23-206ENST00000398842 TLR7Q9NYK1 1049 aaKnown RBP28.34■■■□□ 2.13
CDH23-206ENST00000398842 FPGT-TNNI3KV9GXZ4 949 aa28.34■■■□□ 2.13
CDH23-206ENST00000398842 EYA2O00167 538 aa28.33■■■□□ 2.13
CDH23-206ENST00000398842 CIAO1O76071 339 aa28.33■■■□□ 2.13
CDH23-206ENST00000398842 EP400Q96L91 3159 aa28.32■■■□□ 2.12
CDH23-206ENST00000398842 IRS4O14654 1257 aaPredicted RBP28.32■■■□□ 2.12
CDH23-206ENST00000398842 MAP4K4O95819 1239 aaPredicted RBP28.32■■■□□ 2.12
CDH23-206ENST00000398842 IL15P40933 162 aaPredicted RBP28.32■■■□□ 2.12
CDH23-206ENST00000398842 CCDC57Q2TAC2 916 aa28.32■■■□□ 2.12
CDH23-206ENST00000398842 CNTROBQ8N137 903 aa28.32■■■□□ 2.12
CDH23-206ENST00000398842 ZNF594Q96JF6 807 aaPredicted RBP28.32■■■□□ 2.12
CDH23-206ENST00000398842 USP26Q9BXU7 913 aa28.32■■■□□ 2.12
CDH23-206ENST00000398842 SLC4A3P48751 1232 aa28.32■■■□□ 2.12
CDH23-206ENST00000398842 ESYT1Q9BSJ8 1104 aa28.32■■■□□ 2.12
CDH23-206ENST00000398842 CCNL1Q9UK58 526 aaPredicted RBP28.32■■■□□ 2.12
CDH23-206ENST00000398842 PARP10Q53GL7 1025 aa28.31■■■□□ 2.12
CDH23-206ENST00000398842 SUSD4Q5VX71 490 aa28.31■■■□□ 2.12
CDH23-206ENST00000398842 ERICH6Q7L0X2 663 aa28.31■■■□□ 2.12
CDH23-206ENST00000398842 TTLL11Q8NHH1 800 aa28.31■■■□□ 2.12
CDH23-206ENST00000398842 BCL11BQ9C0K0 894 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms