RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 HYPKQ9NX55 129 aa19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 KCNQ3O43525 872 aa19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 SLC20A2Q08357 652 aa19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 KIAA1524Q8TCG1 905 aa19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 LGR6Q9HBX8 967 aa19.01■□□□□ 0.63
CHMP1A-201ENST00000397901 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 NBPF4Q96M43 638 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 PDRG1Q9NUG6 133 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 SLIT3O75094 1523 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 RGPD2P0DJD1 1756 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 GLRX3O76003 335 aaKnown RBP19■□□□□ 0.63
CHMP1A-201ENST00000397901 TPM3P06753 285 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 SLFN14P0C7P3 912 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 EIF4A1P60842 406 aaKnown RBP19■□□□□ 0.63
CHMP1A-201ENST00000397901 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
CHMP1A-201ENST00000397901 VPS37CA5D8V6 355 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-201ENST00000397901 TRPM3Q9HCF6 1732 aaPredicted RBP18.99■□□□□ 0.63
CHMP1A-201ENST00000397901 KCNJ4P48050 445 aa18.99■□□□□ 0.63
CHMP1A-201ENST00000397901 CTNNA3Q9UI47 895 aa18.99■□□□□ 0.63
CHMP1A-201ENST00000397901 MTMR6Q9Y217 621 aa18.99■□□□□ 0.63
CHMP1A-201ENST00000397901 HSP90AB4PQ58FF6 505 aa18.98■□□□□ 0.63
CHMP1A-201ENST00000397901 PA2G4Q9UQ80 394 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-201ENST00000397901 CLASRPQ8N2M8 674 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-201ENST00000397901 NECAB1Q8N987 351 aa18.98■□□□□ 0.63
CHMP1A-201ENST00000397901 DNAJC2Q99543 621 aaKnown RBP18.98■□□□□ 0.63
CHMP1A-201ENST00000397901 TTC41PQ6P2S7 1318 aa18.98■□□□□ 0.63
CHMP1A-201ENST00000397901 CEMIPQ8WUJ3 1361 aa18.97■□□□□ 0.63
CHMP1A-201ENST00000397901 KDM4AO75164 1064 aa18.97■□□□□ 0.63
CHMP1A-201ENST00000397901 RUFY2Q8WXA3 655 aa18.97■□□□□ 0.63
CHMP1A-201ENST00000397901 MED1Q15648 1581 aaPredicted RBP18.97■□□□□ 0.63
CHMP1A-201ENST00000397901 DDX41Q9UJV9 622 aaKnown RBP18.97■□□□□ 0.63
CHMP1A-201ENST00000397901 CYP46A1Q9Y6A2 500 aa18.97■□□□□ 0.63
CHMP1A-201ENST00000397901 NCBP1Q09161 790 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 ST3GAL1Q11201 340 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 VPS53Q5VIR6 699 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 FUCA2Q9BTY2 467 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 USP42Q9H9J4 1324 aaKnown RBP18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 ADCY9O60503 1353 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 GCP02774 474 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 PROSER2Q86WR7 435 aaPredicted RBP18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 TIGD1Q96MW7 591 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 ECHDC1Q9NTX5 307 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 CHMP3Q9Y3E7 222 aa18.96■□□□□ 0.63
CHMP1A-201ENST00000397901 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 ME3Q16798 604 aa18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 MORC2Q9Y6X9 1032 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 KIF1AQ12756 1690 aa18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 C1orf167Q5SNV9 1468 aa18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 AP5Z1O43299 807 aa18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 ZSWIM6Q9HCJ5 1215 aa18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 C9orf78Q9NZ63 289 aaPredicted RBP18.95■□□□□ 0.62
CHMP1A-201ENST00000397901 PLCD3Q8N3E9 789 aa18.94■□□□□ 0.62
CHMP1A-201ENST00000397901 LMO7Q8WWI1 1683 aa18.94■□□□□ 0.62
CHMP1A-201ENST00000397901 FERMT3Q86UX7 667 aa18.94■□□□□ 0.62
CHMP1A-201ENST00000397901 AACSQ86V21 672 aa18.94■□□□□ 0.62
CHMP1A-201ENST00000397901 PYCARDQ9ULZ3 195 aa18.94■□□□□ 0.62
CHMP1A-201ENST00000397901 BTBD11A6QL63 1104 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 COL9A3Q14050 684 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 TERF2Q15554 542 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 LRRC59Q96AG4 307 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 ZSCAN31Q96LW9 406 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 SH2B1Q9NRF2 756 aaPredicted RBP18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 MAP3K2Q9Y2U5 619 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 RBM8AQ9Y5S9 174 aaKnown RBP18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 TEFQ10587 303 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 MPRIPQ6WCQ1 1025 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 SPC24Q8NBT2 197 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 GPATCH3Q96I76 525 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 FAM227BQ96M60 508 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 CCDC171Q6TFL3 1326 aa18.93■□□□□ 0.62
CHMP1A-201ENST00000397901 CRYBG1Q9Y4K1 1723 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 FAM173BQ6P4H8 233 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 KCNF1Q9H3M0 494 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 C19orf44Q9H6X5 657 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 TPCN1Q9ULQ1 816 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 MST1RQ04912 1400 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 KDM3BQ7LBC6 1761 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 ZKSCAN1P17029 563 aaPredicted RBP18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 NECTIN1Q15223 517 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 CWF19L2Q2TBE0 894 aaKnown RBP18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 CREB3L3Q68CJ9 461 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 KRT28Q7Z3Y7 464 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 TCEANC2Q96MN5 208 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 TM6SF1Q9BZW5 370 aa18.92■□□□□ 0.62
CHMP1A-201ENST00000397901 CAMTA1Q9Y6Y1 1673 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 GOLGA6L6A8MZA4 724 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 HOXB7P09629 217 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 PROSER3Q2NL68 480 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 LARP1BQ659C4 914 aaKnown RBP18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 KLHL34Q8N239 644 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 CALCOCO1Q9P1Z2 691 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 NMIQ13287 307 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 EVI5LQ96CN4 794 aa18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.91■□□□□ 0.62
CHMP1A-201ENST00000397901 MTX1Q13505 466 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 CAMK4Q16566 473 aa18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 ZNF530Q6P9A1 599 aaPredicted RBP18.9■□□□□ 0.62
CHMP1A-201ENST00000397901 CDC37L1Q7L3B6 337 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms