RNA–Protein interactions for RNA: ENST00000397766.3

PGBD4-201, Transcript of piggyBac transposable element derived 4, humanhuman

APPRIS P1 BASIC

Gene PGBD4, Length 6,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4-201ENST00000397766 UBA5Q9GZZ9 404 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 MIS18AQ9NYP9 233 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 AMOTL2Q9Y2J4 779 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 MAP3K2Q9Y2U5 619 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 SNRPA1P09661 255 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 HDAC1Q13547 482 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC8Q9H0W5 538 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 GSTTP1A0A1W2PQM5 241 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 ALDH1L1O75891 902 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 UBE2HP62256 183 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC102BQ68D86 513 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 DDX46Q7L014 1031 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 EMILIN1Q9Y6C2 1016 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 RPRD2Q5VT52 1461 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 URI1O94763 535 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 XPCQ01831 940 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 CKAP4Q07065 602 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 SPAG1Q07617 926 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 TTLL12Q14166 644 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 TDRD12Q587J7 1177 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 KLHL10Q6JEL2 608 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 WAPLQ7Z5K2 1190 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 BBXQ8WY36 941 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 TNPO1Q92973 898 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 PAXBP1Q9Y5B6 917 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 USP16Q9Y5T5 823 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC171Q6TFL3 1326 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 NOS1P29475 1434 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 TRIM27P14373 513 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 ST5P78524 1137 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 CCDC152Q4G0S7 254 aa7.17□□□□□ -1.26
PGBD4-201ENST00000397766 TTC12Q9H892 705 aaPredicted RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 RBM27Q9P2N5 1060 aaKnown RBP7.17□□□□□ -1.26
PGBD4-201ENST00000397766 POLR3GO15318 223 aaPredicted RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 NF2P35240 595 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 PRPHP41219 470 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 GNAQP50148 359 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 CADPS2Q86UW7 1296 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 LRRC45Q96CN5 670 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 PTCD1O75127 700 aaKnown RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 TBCAO75347 108 aaKnown RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 PLVAPQ9BX97 442 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 NBPF7P0C2Y1 421 aaPredicted RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 THUMPD2Q9BTF0 503 aaKnown RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 TNNT1P13805 278 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 PRKCSHP14314 528 aaPredicted RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 CTNNA2P26232 953 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 MPRIPQ6WCQ1 1025 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 ANKRD24Q8TF21 1146 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 PPM1EQ8WY54 764 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 THOC2Q8NI27 1593 aaKnown RBP7.16□□□□□ -1.26
PGBD4-201ENST00000397766 SSFA2P28290 1259 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 GIMAP7Q8NHV1 300 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 EXOC1Q9NV70 894 aa7.16□□□□□ -1.26
PGBD4-201ENST00000397766 SOS1Q07889 1333 aaPredicted RBP7.15□□□□□ -1.26
PGBD4-201ENST00000397766 CALM1P0DP23 149 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 CALM2P0DP24 149 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 CALM3P0DP25 149 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 KLHL40Q2TBA0 621 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 SPECC1LQ69YQ0 1117 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 KCNG4Q8TDN1 519 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 BEGAINQ9BUH8 593 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 MBIPQ9NS73 344 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 UHRF1BP1Q6BDS2 1440 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 MYO1BO43795 1136 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 TBC1D9Q6ZT07 1266 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 TBC1D5Q92609 795 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 TSNARE1Q96NA8 513 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 GOPCQ9HD26 462 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 ORC3Q9UBD5 711 aaPredicted RBP7.15□□□□□ -1.26
PGBD4-201ENST00000397766 PEG3Q9GZU2 1588 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 RTL9Q8NET4 1388 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 TSPY2A6NKD2 308 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 KRT28Q7Z3Y7 464 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 TMC6Q7Z403 805 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 PRIMPOLQ96LW4 560 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 TBC1D2Q9BYX2 928 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 CALCOCO1Q9P1Z2 691 aa7.15□□□□□ -1.26
PGBD4-201ENST00000397766 ADGRF5Q8IZF2 1346 aa7.15□□□□□ -1.27
PGBD4-201ENST00000397766 TUBB4BP68371 445 aa7.15□□□□□ -1.27
PGBD4-201ENST00000397766 CTNNBL1Q8WYA6 563 aaPredicted RBP7.15□□□□□ -1.27
PGBD4-201ENST00000397766 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.27
PGBD4-201ENST00000397766 UBA7P41226 1012 aa7.15□□□□□ -1.27
PGBD4-201ENST00000397766 NUCB1Q02818 461 aa7.15□□□□□ -1.27
PGBD4-201ENST00000397766 SNW1Q13573 536 aaKnown RBP7.15□□□□□ -1.27
PGBD4-201ENST00000397766 LDHAL6AQ6ZMR3 332 aa7.15□□□□□ -1.27
PGBD4-201ENST00000397766 SREK1Q8WXA9 508 aaKnown RBP7.15□□□□□ -1.27
PGBD4-201ENST00000397766 CCDC113Q9H0I3 377 aa7.15□□□□□ -1.27
PGBD4-201ENST00000397766 F6X3S4 739 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 CCDC175P0C221 793 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 GNAT2P19087 354 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 RBM25P49756 843 aaKnown RBP7.14□□□□□ -1.27
PGBD4-201ENST00000397766 USHBP1Q8N6Y0 703 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 NAP1L4Q99733 375 aaKnown RBP7.14□□□□□ -1.27
PGBD4-201ENST00000397766 ZSCAN22P10073 491 aaPredicted RBP7.14□□□□□ -1.27
PGBD4-201ENST00000397766 WTAPQ15007 396 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 CCDC174Q6PII3 467 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 CEP112Q8N8E3 955 aa7.14□□□□□ -1.27
PGBD4-201ENST00000397766 ESR2Q92731 530 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms