RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 MIS18AQ9NYP9 233 aa21.47■■□□□ 1.03
CUX2-202ENST00000397643 IBTKQ9P2D0 1353 aaPredicted RBP21.46■■□□□ 1.03
CUX2-202ENST00000397643 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 GTF2E1P29083 439 aaPredicted RBP21.45■■□□□ 1.02
CUX2-202ENST00000397643 HOXA10P31260 410 aaPredicted RBP21.45■■□□□ 1.02
CUX2-202ENST00000397643 SCNN1DP51172 638 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 CC2D2BQ6DHV5 1058 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 JDP2Q8WYK2 163 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 NYXQ9GZU5 481 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 DDX21Q9NR30 783 aaKnown RBP eCLIP21.45■■□□□ 1.02
CUX2-202ENST00000397643 MAP3K15Q6ZN16 1313 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 UBN2Q6ZU65 1347 aa21.45■■□□□ 1.02
CUX2-202ENST00000397643 WDR33Q9C0J8 1336 aaKnown RBP21.45■■□□□ 1.02
CUX2-202ENST00000397643 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
CUX2-202ENST00000397643 FMR1Q06787 632 aaKnown RBP eCLIP21.43■■□□□ 1.02
CUX2-202ENST00000397643 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
CUX2-202ENST00000397643 ABT1Q9ULW3 272 aaKnown RBP21.43■■□□□ 1.02
CUX2-202ENST00000397643 GJA3Q9Y6H8 435 aa21.43■■□□□ 1.02
CUX2-202ENST00000397643 EPS15P42566 896 aa21.42■■□□□ 1.02
CUX2-202ENST00000397643 EIF6P56537 245 aaKnown RBP21.42■■□□□ 1.02
CUX2-202ENST00000397643 NGEFQ8N5V2 710 aa21.42■■□□□ 1.02
CUX2-202ENST00000397643 GPTP24298 496 aa21.41■■□□□ 1.02
CUX2-202ENST00000397643 MAP2K1Q02750 393 aaPredicted RBP21.41■■□□□ 1.02
CUX2-202ENST00000397643 SUSD4Q5VX71 490 aa21.4■■□□□ 1.02
CUX2-202ENST00000397643 C3orf67Q6ZVT6 689 aa21.4■■□□□ 1.02
CUX2-202ENST00000397643 LARGE2Q8N3Y3 721 aa21.4■■□□□ 1.02
CUX2-202ENST00000397643 RPGRQ92834 1020 aaKnown RBP21.4■■□□□ 1.02
CUX2-202ENST00000397643 ABHD8Q96I13 439 aa21.4■■□□□ 1.02
CUX2-202ENST00000397643 NTSR2O95665 410 aa21.39■■□□□ 1.01
CUX2-202ENST00000397643 LMOD1P29536 600 aaPredicted RBP21.39■■□□□ 1.01
CUX2-202ENST00000397643 EIF4A1P60842 406 aaKnown RBP21.39■■□□□ 1.01
CUX2-202ENST00000397643 ZNF34Q8IZ26 560 aa21.39■■□□□ 1.01
CUX2-202ENST00000397643 CRAMP1Q96RY5 1269 aa21.39■■□□□ 1.01
CUX2-202ENST00000397643 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.01
CUX2-202ENST00000397643 TRPM7Q96QT4 1865 aa21.39■■□□□ 1.01
CUX2-202ENST00000397643 PPEF1O14829 653 aaPredicted RBP21.38■■□□□ 1.01
CUX2-202ENST00000397643 GRIPAP1Q4V328 841 aa21.38■■□□□ 1.01
CUX2-202ENST00000397643 CST9Q5W186 159 aa21.38■■□□□ 1.01
CUX2-202ENST00000397643 KIF6Q6ZMV9 814 aa21.38■■□□□ 1.01
CUX2-202ENST00000397643 RRP7AQ9Y3A4 280 aaKnown RBP21.38■■□□□ 1.01
CUX2-202ENST00000397643 TRAF5O00463 557 aa21.37■■□□□ 1.01
CUX2-202ENST00000397643 USP50Q70EL3 339 aaPredicted RBP21.37■■□□□ 1.01
CUX2-202ENST00000397643 CAPNS2Q96L46 248 aa21.37■■□□□ 1.01
CUX2-202ENST00000397643 MYL6BP14649 208 aa21.36■■□□□ 1.01
CUX2-202ENST00000397643 CYP4F22Q6NT55 531 aa21.36■■□□□ 1.01
CUX2-202ENST00000397643 PNISRQ8TF01 805 aaKnown RBP21.36■■□□□ 1.01
CUX2-202ENST00000397643 RBM17Q96I25 401 aaKnown RBP21.36■■□□□ 1.01
CUX2-202ENST00000397643 THUMPD2Q9BTF0 503 aaKnown RBP21.36■■□□□ 1.01
CUX2-202ENST00000397643 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
CUX2-202ENST00000397643 LRP10Q7Z4F1 713 aa21.35■■□□□ 1.01
CUX2-202ENST00000397643 PLEKHF1Q96S99 279 aa21.35■■□□□ 1.01
CUX2-202ENST00000397643 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
CUX2-202ENST00000397643 NIM1KQ8IY84 436 aa21.34■■□□□ 1.01
CUX2-202ENST00000397643 GPRC5DQ9NZD1 345 aa21.34■■□□□ 1.01
CUX2-202ENST00000397643 TLL2Q9Y6L7 1015 aa21.34■■□□□ 1.01
CUX2-202ENST00000397643 PPIP5K2O43314 1243 aa21.33■■□□□ 1.01
CUX2-202ENST00000397643 ECE1P42892 770 aa21.33■■□□□ 1.01
CUX2-202ENST00000397643 AOC3Q16853 763 aa21.33■■□□□ 1.01
CUX2-202ENST00000397643 GPR101Q96P66 508 aaPredicted RBP21.33■■□□□ 1.01
CUX2-202ENST00000397643 ERBB4Q15303 1308 aa21.32■■□□□ 1
CUX2-202ENST00000397643 ADARB2Q9NS39 739 aaKnown RBP21.32■■□□□ 1
CUX2-202ENST00000397643 ATP6V0A2Q9Y487 856 aa21.32■■□□□ 1
CUX2-202ENST00000397643 ABCC4O15439 1325 aa21.31■■□□□ 1
CUX2-202ENST00000397643 LAMB2P55268 1798 aa21.31■■□□□ 1
CUX2-202ENST00000397643 CXCL9Q07325 125 aa21.31■■□□□ 1
CUX2-202ENST00000397643 NFE2L2Q16236 605 aa21.31■■□□□ 1
CUX2-202ENST00000397643 FAM161AQ3B820 660 aa21.31■■□□□ 1
CUX2-202ENST00000397643 PAXIP1Q6ZW49 1069 aaPredicted RBP21.31■■□□□ 1
CUX2-202ENST00000397643 RTFDC1Q9BY42 306 aaPredicted RBP21.31■■□□□ 1
CUX2-202ENST00000397643 GRM1Q13255 1194 aa21.3■■□□□ 1
CUX2-202ENST00000397643 PDIA6Q15084 440 aa21.3■■□□□ 1
CUX2-202ENST00000397643 PARP10Q53GL7 1025 aa21.3■■□□□ 1
CUX2-202ENST00000397643 SLC10A5Q5PT55 438 aa21.3■■□□□ 1
CUX2-202ENST00000397643 PPP1R42Q7Z4L9 355 aa21.3■■□□□ 1
CUX2-202ENST00000397643 VPS33BQ9H267 617 aa21.3■■□□□ 1
CUX2-202ENST00000397643 AOC2O75106 756 aa21.29■■□□□ 1
CUX2-202ENST00000397643 SLC34A2O95436 690 aa21.29■■□□□ 1
CUX2-202ENST00000397643 SAPCD2Q86UD0 394 aa21.29■■□□□ 1
CUX2-202ENST00000397643 NLRP3Q96P20 1036 aa21.29■■□□□ 1
CUX2-202ENST00000397643 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
CUX2-202ENST00000397643 TSKSQ9UJT2 592 aa21.28■■□□□ 1
CUX2-202ENST00000397643 ANKRD36CQ5JPF3 1778 aa21.28■■□□□ 1
CUX2-202ENST00000397643 DUOX1Q9NRD9 1551 aa21.27■■□□□ 1
CUX2-202ENST00000397643 MAP2K2P36507 400 aa21.27■■□□□ 1
CUX2-202ENST00000397643 GMPSP49915 693 aaPredicted RBP21.27■■□□□ 1
CUX2-202ENST00000397643 PROSER3Q2NL68 480 aa21.27■■□□□ 1
CUX2-202ENST00000397643 BEGAINQ9BUH8 593 aa21.27■■□□□ 1
CUX2-202ENST00000397643 UTP14AQ9BVJ6 771 aaKnown RBP21.27■■□□□ 1
CUX2-202ENST00000397643 PGAP2Q9UHJ9 254 aa21.27■■□□□ 1
CUX2-202ENST00000397643 CELF2O95319 508 aaKnown RBP21.26■□□□□ 0.99
CUX2-202ENST00000397643 NEFMP07197 916 aa21.26■□□□□ 0.99
CUX2-202ENST00000397643 GLIS2Q9BZE0 524 aaPredicted RBP21.26■□□□□ 0.99
CUX2-202ENST00000397643 CDHR2Q9BYE9 1310 aa21.26■□□□□ 0.99
CUX2-202ENST00000397643 RGS19P49795 217 aa21.25■□□□□ 0.99
CUX2-202ENST00000397643 HIRAP54198 1017 aaPredicted RBP21.25■□□□□ 0.99
CUX2-202ENST00000397643 KIAA2012Q0VF49 1180 aa21.25■□□□□ 0.99
CUX2-202ENST00000397643 SUPT20HQ8NEM7 779 aa21.25■□□□□ 0.99
CUX2-202ENST00000397643 HHIPL1Q96JK4 782 aa21.25■□□□□ 0.99
CUX2-202ENST00000397643 ANXA1P04083 346 aa21.24■□□□□ 0.99
CUX2-202ENST00000397643 SP8Q8IXZ3 490 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms