RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 ALDH1L1O75891 902 aa18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 KIAA2012Q0VF49 1180 aa18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 NAP1L2Q9ULW6 460 aaPredicted RBP18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 HDAC5Q9UQL6 1122 aa18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 XRN1Q8IZH2 1706 aaKnown RBP18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 SPC24Q8NBT2 197 aa18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 RAPGEF4Q8WZA2 1011 aa18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 TFIP11Q9UBB9 837 aaKnown RBP18.99■□□□□ 0.63
ATP2A3-206ENST00000397043 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 BLOC1S2Q6QNY1 142 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 NFATC2IPQ8NCF5 419 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 TPCN1Q9ULQ1 816 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 ANKARQ7Z5J8 1434 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 PXDNLA1KZ92 1463 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 VPS53Q5VIR6 699 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 COPS6Q7L5N1 327 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 XAGE3Q8WTP9 111 aa18.98■□□□□ 0.63
ATP2A3-206ENST00000397043 ATP5J2-PTCD1G3V325 749 aa18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 PTCD1O75127 700 aaKnown RBP18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 MTMR6Q9Y217 621 aa18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 TAF6LQ9Y6J9 622 aa18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 PPFIA3O75145 1194 aa18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 HSP90B1P14625 803 aaKnown RBP18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 ZNF500O60304 480 aaPredicted RBP18.97■□□□□ 0.63
ATP2A3-206ENST00000397043 CHGBP05060 677 aa18.96■□□□□ 0.63
ATP2A3-206ENST00000397043 RNF20Q5VTR2 975 aa18.96■□□□□ 0.63
ATP2A3-206ENST00000397043 ZSWIM6Q9HCJ5 1215 aa18.96■□□□□ 0.63
ATP2A3-206ENST00000397043 SLC27A2O14975 620 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 CSPP1Q1MSJ5 1256 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 KAZALD1Q96I82 304 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 ZSCAN31Q96LW9 406 aaPredicted RBP18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 EPB41L2O43491 1005 aaKnown RBP18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 CDC37L1Q7L3B6 337 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 ARHGEF25Q86VW2 580 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 DDX21Q9NR30 783 aaKnown RBP eCLIP18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 SH2B1Q9NRF2 756 aaPredicted RBP18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 PSMA5P28066 241 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 UBE3BQ7Z3V4 1068 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 CKAP2LQ8IYA6 745 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 FAM184AQ8NB25 1140 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 DDX17Q92841 729 aaKnown RBP18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 LRRC2Q9BYS8 371 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 TAOK2Q9UL54 1235 aa18.95■□□□□ 0.62
ATP2A3-206ENST00000397043 KIF13AQ9H1H9 1805 aa18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 CEBPZQ03701 1054 aaKnown RBP18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 NECTIN1Q15223 517 aa18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 ZNF589Q86UQ0 364 aaPredicted RBP18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 PXDNQ92626 1479 aa18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 MTX1Q13505 466 aa18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 DDX11Q96FC9 970 aa18.94■□□□□ 0.62
ATP2A3-206ENST00000397043 IGKV5-2P06315 115 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 EPHA10Q5JZY3 1008 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 ZNF790Q6PG37 636 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 CCDC129Q6ZRS4 1044 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 TTC5Q8N0Z6 440 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 KRT85P78386 507 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 LARP1Q6PKG0 1096 aaKnown RBP18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 KRT28Q7Z3Y7 464 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 ARHGAP23Q9P227 1491 aa18.93■□□□□ 0.62
ATP2A3-206ENST00000397043 CABLES1Q8TDN4 633 aa18.92■□□□□ 0.62
ATP2A3-206ENST00000397043 NEUROD6Q96NK8 337 aa18.92■□□□□ 0.62
ATP2A3-206ENST00000397043 SLIT1O75093 1534 aa18.92■□□□□ 0.62
ATP2A3-206ENST00000397043 HIP1O00291 1037 aa18.92■□□□□ 0.62
ATP2A3-206ENST00000397043 LETM1O95202 739 aaPredicted RBP18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 ST3GAL1Q11201 340 aa18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 DDX46Q7L014 1031 aaKnown RBP18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 MAP4K1Q92918 833 aa18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 PKNOX2Q96KN3 472 aa18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 USP16Q9Y5T5 823 aa18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 MCM5P33992 734 aa18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 CHRNA2Q15822 529 aa18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 ZNF496Q96IT1 587 aaPredicted RBP18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 SEC62Q99442 399 aaKnown RBP18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 ZNF330Q9Y3S2 320 aaPredicted RBP18.91■□□□□ 0.62
ATP2A3-206ENST00000397043 TFCP2Q12800 502 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 TTC6Q86TZ1 520 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 PROSER2Q86WR7 435 aaPredicted RBP18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 DRC7Q8IY82 874 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 BICD2Q8TD16 824 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 CACNA1FO60840 1977 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 ANKRD13DQ6ZTN6 518 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 TMEM87AQ8NBN3 555 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 TSC1Q92574 1164 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 USP42Q9H9J4 1324 aaKnown RBP18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 LRRC37A3O60309 1634 aa18.9■□□□□ 0.62
ATP2A3-206ENST00000397043 H3BQV1 296 aa18.89■□□□□ 0.62
ATP2A3-206ENST00000397043 GCKRQ14397 625 aa18.89■□□□□ 0.62
ATP2A3-206ENST00000397043 IFFO2Q5TF58 517 aa18.89■□□□□ 0.62
ATP2A3-206ENST00000397043 IL17RAQ96F46 866 aa18.89■□□□□ 0.62
ATP2A3-206ENST00000397043 SPATA32Q96LK8 384 aa18.89■□□□□ 0.62
ATP2A3-206ENST00000397043 JAK2O60674 1132 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 LIG1P18858 919 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 TM6SF1Q9BZW5 370 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 A0A087WZG4 1122 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 FAM177BA6PVY3 158 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 KDM4AO75164 1064 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 CCDC192P0DO97 292 aa18.89■□□□□ 0.61
ATP2A3-206ENST00000397043 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 414.4 ms