RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 AIDAQ96BJ3 306 aa18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 IL13P35225 146 aa18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 TOM1L2Q6ZVM7 507 aa18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 UBAC1Q9BSL1 405 aa18.39■□□□□ 0.53
ATP2A3-205ENST00000397041 CWF19L2Q2TBE0 894 aaKnown RBP18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 CASQ1P31415 396 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 METTL24Q5JXM2 366 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 CREB3L3Q68CJ9 461 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 GPT2Q8TD30 523 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 PIP4K2AP48426 406 aaPredicted RBP18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 CHST3Q7LGC8 479 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 PPP1R9BQ96SB3 815 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 ZSCAN16Q9H4T2 348 aaPredicted RBP18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 HMG20BQ9P0W2 317 aa18.38■□□□□ 0.53
ATP2A3-205ENST00000397041 ZNF213O14771 459 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 ZSCAN25Q6NSZ9 544 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 DNAI1Q9UI46 699 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 KRT222Q8N1A0 295 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 TSPYL1Q9H0U9 437 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 CAVIN2O95810 425 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 MPHOSPH8Q99549 860 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 GNG11P61952 73 aa18.37■□□□□ 0.53
ATP2A3-205ENST00000397041 MICU3Q86XE3 530 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 KCNH5Q8NCM2 988 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 LMOD1P29536 600 aaPredicted RBP18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 AMOTQ4VCS5 1084 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 ZBTB3Q9H5J0 574 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 RIOK3O14730 519 aaKnown RBP18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 TAF3Q5VWG9 929 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 EYA1Q99502 592 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 DEF6Q9H4E7 631 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 SNX14Q9Y5W7 946 aa18.36■□□□□ 0.53
ATP2A3-205ENST00000397041 BRD1O95696 1058 aa18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 EPS15P42566 896 aa18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 ABCC10Q5T3U5 1492 aa18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 BMS1Q14692 1282 aaKnown RBP18.35■□□□□ 0.53
ATP2A3-205ENST00000397041 MARCKSP29966 332 aaPredicted RBP18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 RUFY3Q7L099 469 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 GRM8O00222 908 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 CHL1O00533 1208 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 KIF5CO60282 957 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 U2AF2P26368 475 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 LRP2BPQ9P2M1 347 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 MINDY4BA8MYZ0 360 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 JAKMIP3Q5VZ66 844 aa18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 SAMD1Q6SPF0 538 aaPredicted RBP18.34■□□□□ 0.53
ATP2A3-205ENST00000397041 CCDC181Q5TID7 509 aa18.33■□□□□ 0.53
ATP2A3-205ENST00000397041 CENPHQ9H3R5 247 aa18.33■□□□□ 0.53
ATP2A3-205ENST00000397041 CALCOCO1Q9P1Z2 691 aa18.33■□□□□ 0.53
ATP2A3-205ENST00000397041 RIMS2Q9UQ26 1411 aa18.33■□□□□ 0.52
ATP2A3-205ENST00000397041 UBASH3AP57075 661 aa18.33■□□□□ 0.52
ATP2A3-205ENST00000397041 MYRIPQ8NFW9 859 aa18.33■□□□□ 0.52
ATP2A3-205ENST00000397041 KLF18A0A0U1RQI7 1052 aa18.33■□□□□ 0.52
ATP2A3-205ENST00000397041 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
ATP2A3-205ENST00000397041 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.52
ATP2A3-205ENST00000397041 MRPS27Q92552 414 aaKnown RBP18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 NAPBQ9H115 298 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 NPATQ14207 1427 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 STIM1Q13586 685 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 COPS6Q7L5N1 327 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 KIAA1328Q86T90 577 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 SGSM2O43147 1006 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 XAGE3Q8WTP9 111 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 CDK5RAP3Q96JB5 506 aa18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 DENND4BO75064 1496 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-205ENST00000397041 TANGO6Q9C0B7 1094 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 RAI14Q9P0K7 980 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 ABCC4O15439 1325 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 GOLGA8AA7E2F4 631 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 IFIT3O14879 490 aaKnown RBP18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 SYKP43405 635 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 APOBRQ0VD83 1088 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 WASF1Q92558 559 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 SLU7O95391 586 aaKnown RBP18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 ANKRD13DQ6ZTN6 518 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 CCDC150Q8NCX0 1101 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 PLEKHF1Q96S99 279 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 SLC12A7Q9Y666 1083 aa18.31■□□□□ 0.52
ATP2A3-205ENST00000397041 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 CCDC12Q8WUD4 166 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 AKAP2Q9Y2D5 859 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 MAP3K19Q56UN5 1328 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 TTC41PQ6P2S7 1318 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 BCORL1Q5H9F3 1711 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 IARSP41252 1262 aaKnown RBP18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 LMAN1P49257 510 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 FAM227BQ96M60 508 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
ATP2A3-205ENST00000397041 MCMDC2Q4G0Z9 681 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms