RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
GAPDH-204ENST00000396859 NTSR2O95665 410 aa17.35■□□□□ 0.37
GAPDH-204ENST00000396859 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
GAPDH-204ENST00000396859 LINS1Q8NG48 757 aa17.35■□□□□ 0.37
GAPDH-204ENST00000396859 API5Q9BZZ5 524 aaKnown RBP17.35■□□□□ 0.37
GAPDH-204ENST00000396859 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
GAPDH-204ENST00000396859 F6X3S4 739 aa17.34■□□□□ 0.37
GAPDH-204ENST00000396859 HSP90B1P14625 803 aaKnown RBP17.34■□□□□ 0.37
GAPDH-204ENST00000396859 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
GAPDH-204ENST00000396859 CCDC24Q8N4L8 307 aa17.34■□□□□ 0.37
GAPDH-204ENST00000396859 SH3TC1Q8TE82 1336 aa17.34■□□□□ 0.37
GAPDH-204ENST00000396859 NOB1Q9ULX3 412 aaKnown RBP17.34■□□□□ 0.37
GAPDH-204ENST00000396859 H0YIN7 160 aa17.33■□□□□ 0.36
GAPDH-204ENST00000396859 ERFEQ4G0M1 354 aa17.33■□□□□ 0.36
GAPDH-204ENST00000396859 NLGN2Q8NFZ4 835 aa17.33■□□□□ 0.36
GAPDH-204ENST00000396859 FRAT1Q92837 279 aaPredicted RBP17.33■□□□□ 0.36
GAPDH-204ENST00000396859 NEURL1BA8MQ27 555 aa17.32■□□□□ 0.36
GAPDH-204ENST00000396859 BCAR3O75815 825 aa17.32■□□□□ 0.36
GAPDH-204ENST00000396859 CWF19L2Q2TBE0 894 aaKnown RBP17.32■□□□□ 0.36
GAPDH-204ENST00000396859 C2CD5Q86YS7 1000 aa17.32■□□□□ 0.36
GAPDH-204ENST00000396859 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
GAPDH-204ENST00000396859 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
GAPDH-204ENST00000396859 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
GAPDH-204ENST00000396859 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
GAPDH-204ENST00000396859 ZBTB38Q8NAP3 1195 aaPredicted RBP17.31■□□□□ 0.36
GAPDH-204ENST00000396859 NLRP3Q96P20 1036 aa17.31■□□□□ 0.36
GAPDH-204ENST00000396859 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
GAPDH-204ENST00000396859 RCAN3Q9UKA8 241 aa17.31■□□□□ 0.36
GAPDH-204ENST00000396859 PXDNLA1KZ92 1463 aa17.31■□□□□ 0.36
GAPDH-204ENST00000396859 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
GAPDH-204ENST00000396859 ALDH1L1O75891 902 aa17.3■□□□□ 0.36
GAPDH-204ENST00000396859 DPEP1P16444 411 aa17.3■□□□□ 0.36
GAPDH-204ENST00000396859 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
GAPDH-204ENST00000396859 BEND3Q5T5X7 828 aa17.3■□□□□ 0.36
GAPDH-204ENST00000396859 FAM89AQ96GI7 184 aa17.3■□□□□ 0.36
GAPDH-204ENST00000396859 N4BP2Q86UW6 1770 aaPredicted RBP17.3■□□□□ 0.36
GAPDH-204ENST00000396859 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 ANKRD31Q8N7Z5 1873 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 CHRNA5P30532 468 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 GCKRQ14397 625 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 SLC10A5Q5PT55 438 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 ZKSCAN2Q63HK3 967 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
GAPDH-204ENST00000396859 RPGRQ92834 1020 aaKnown RBP17.29■□□□□ 0.36
GAPDH-204ENST00000396859 PIM2Q9P1W9 311 aa17.29■□□□□ 0.36
GAPDH-204ENST00000396859 IRS4O14654 1257 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-204ENST00000396859 HCLS1P14317 486 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-204ENST00000396859 CCT4P50991 539 aaKnown RBP17.28■□□□□ 0.36
GAPDH-204ENST00000396859 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
GAPDH-204ENST00000396859 ZNF622Q969S3 477 aaKnown RBP eCLIP17.28■□□□□ 0.36
GAPDH-204ENST00000396859 C9orf78Q9NZ63 289 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-204ENST00000396859 NPR1P16066 1061 aa17.27■□□□□ 0.36
GAPDH-204ENST00000396859 MASTLQ96GX5 879 aa17.27■□□□□ 0.36
GAPDH-204ENST00000396859 KIAA1551Q9HCM1 1747 aa17.27■□□□□ 0.35
GAPDH-204ENST00000396859 CDHR2Q9BYE9 1310 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 KLRG2A4D1S0 409 aaPredicted RBP17.26■□□□□ 0.35
GAPDH-204ENST00000396859 SRGNP10124 158 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 MS4A1P11836 297 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 GPR162Q16538 588 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 STYK1Q6J9G0 422 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 FTSJ3Q8IY81 847 aaKnown RBP17.26■□□□□ 0.35
GAPDH-204ENST00000396859 SYNE4Q8N205 404 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
GAPDH-204ENST00000396859 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
GAPDH-204ENST00000396859 H7C1W4 665 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 GRM8O00222 908 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 PDE8AO60658 829 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 TRIM27P14373 513 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
GAPDH-204ENST00000396859 TTLL6Q8N841 843 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 JARID2Q92833 1246 aaPredicted RBP17.25■□□□□ 0.35
GAPDH-204ENST00000396859 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
GAPDH-204ENST00000396859 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 TNRC6CQ9HCJ0 1690 aaKnown RBP17.25■□□□□ 0.35
GAPDH-204ENST00000396859 LAMB2P55268 1798 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 DLEC1Q9Y238 1755 aa17.25■□□□□ 0.35
GAPDH-204ENST00000396859 KCNA3P22001 575 aa17.24■□□□□ 0.35
GAPDH-204ENST00000396859 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
GAPDH-204ENST00000396859 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
GAPDH-204ENST00000396859 WWC3Q9ULE0 1092 aa17.24■□□□□ 0.35
GAPDH-204ENST00000396859 COL11A2P13942 1736 aaPredicted RBP17.24■□□□□ 0.35
GAPDH-204ENST00000396859 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
GAPDH-204ENST00000396859 DDX46Q7L014 1031 aaKnown RBP17.23■□□□□ 0.35
GAPDH-204ENST00000396859 ABCC4O15439 1325 aa17.22■□□□□ 0.35
GAPDH-204ENST00000396859 CCDC152Q4G0S7 254 aa17.22■□□□□ 0.35
GAPDH-204ENST00000396859 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
GAPDH-204ENST00000396859 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
GAPDH-204ENST00000396859 GRIN3BO60391 1043 aa17.21■□□□□ 0.35
GAPDH-204ENST00000396859 CTSWP56202 376 aa17.21■□□□□ 0.35
GAPDH-204ENST00000396859 SF3B3Q15393 1217 aaKnown RBP17.21■□□□□ 0.35
GAPDH-204ENST00000396859 INTS3Q68E01 1043 aaKnown RBP17.21■□□□□ 0.35
GAPDH-204ENST00000396859 CRAMP1Q96RY5 1269 aa17.21■□□□□ 0.35
GAPDH-204ENST00000396859 TMX4Q9H1E5 349 aaPredicted RBP17.21■□□□□ 0.35
GAPDH-204ENST00000396859 BRCA1P38398 1863 aaKnown RBP17.2■□□□□ 0.34
GAPDH-204ENST00000396859 HOXA10P31260 410 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-204ENST00000396859 PRPF40BQ6NWY9 871 aaKnown RBP17.2■□□□□ 0.34
GAPDH-204ENST00000396859 C3orf67Q6ZVT6 689 aa17.2■□□□□ 0.34
GAPDH-204ENST00000396859 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms