RNA–Protein interactions for RNA: ENST00000396183.7

CTNNB1-202, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-202ENST00000396183 MEGF6O75095 1541 aa16.78■□□□□ 0.28
CTNNB1-202ENST00000396183 A0A0D9SFI3 127 aa16.78■□□□□ 0.28
CTNNB1-202ENST00000396183 SGSM2O43147 1006 aa16.78■□□□□ 0.28
CTNNB1-202ENST00000396183 COL9A3Q14050 684 aaPredicted RBP16.78■□□□□ 0.28
CTNNB1-202ENST00000396183 ANP32BQ92688 251 aaKnown RBP16.78■□□□□ 0.28
CTNNB1-202ENST00000396183 OSBPL3Q9H4L5 887 aa16.78■□□□□ 0.28
CTNNB1-202ENST00000396183 LRRC24Q50LG9 513 aa16.77■□□□□ 0.28
CTNNB1-202ENST00000396183 SNX14Q9Y5W7 946 aa16.77■□□□□ 0.28
CTNNB1-202ENST00000396183 DDX11Q96FC9 970 aa16.77■□□□□ 0.27
CTNNB1-202ENST00000396183 RBM8AQ9Y5S9 174 aaKnown RBP16.77■□□□□ 0.27
CTNNB1-202ENST00000396183 CEBPZQ03701 1054 aaKnown RBP16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 FAM173BQ6P4H8 233 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 BICDL1Q6ZP65 573 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 PDRG1Q9NUG6 133 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 TAF6LQ9Y6J9 622 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 CCDC57Q2TAC2 916 aa16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 CWC25Q9NXE8 425 aaPredicted RBP16.76■□□□□ 0.27
CTNNB1-202ENST00000396183 SYCE3A1L190 88 aa16.75■□□□□ 0.27
CTNNB1-202ENST00000396183 GRPEL1Q9HAV7 217 aa16.75■□□□□ 0.27
CTNNB1-202ENST00000396183 HAND2P61296 217 aa16.75■□□□□ 0.27
CTNNB1-202ENST00000396183 DBNLQ9UJU6 430 aaKnown RBP16.75■□□□□ 0.27
CTNNB1-202ENST00000396183 SNAP23O00161 211 aa16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 PRIM1P49642 420 aaKnown RBP16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 ZNF589Q86UQ0 364 aaPredicted RBP16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 STAP2Q9UGK3 403 aa16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 CIZ1Q9ULV3 898 aaPredicted RBP16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 LARGE1O95461 756 aa16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 CYP46A1Q9Y6A2 500 aa16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 NPHP1O15259 732 aa16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 EVI5LQ96CN4 794 aa16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
CTNNB1-202ENST00000396183 APPP05067 770 aa16.73■□□□□ 0.27
CTNNB1-202ENST00000396183 CCDC24Q8N4L8 307 aa16.73■□□□□ 0.27
CTNNB1-202ENST00000396183 PI16Q6UXB8 463 aa16.73■□□□□ 0.27
CTNNB1-202ENST00000396183 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
CTNNB1-202ENST00000396183 NWD1Q149M9 1564 aa16.73■□□□□ 0.27
CTNNB1-202ENST00000396183 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 KDM6AO15550 1401 aaPredicted RBP16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 WDR17Q8IZU2 1322 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 RGPD2P0DJD1 1756 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 KDM4FA0A1W2PPD8 638 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 CHMP4CQ96CF2 233 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 CNNM1Q9NRU3 951 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 EXOC5O00471 708 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 PTPN12Q05209 780 aaKnown RBP16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 TNNI3KQ59H18 835 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 PIGBQ92521 554 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 FPGT-TNNI3KV9GXZ4 949 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 TOPAZ1Q8N9V7 1692 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 MST1RQ04912 1400 aa16.72■□□□□ 0.27
CTNNB1-202ENST00000396183 CEP126Q9P2H0 1117 aa16.71■□□□□ 0.27
CTNNB1-202ENST00000396183 TRMT112Q9UI30 125 aaKnown RBP16.71■□□□□ 0.27
CTNNB1-202ENST00000396183 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
CTNNB1-202ENST00000396183 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
CTNNB1-202ENST00000396183 SALL3Q9BXA9 1300 aa16.71■□□□□ 0.27
CTNNB1-202ENST00000396183 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.27
CTNNB1-202ENST00000396183 HSPA4P34932 840 aa16.71■□□□□ 0.26
CTNNB1-202ENST00000396183 ZDHHC9Q9Y397 364 aa16.71■□□□□ 0.26
CTNNB1-202ENST00000396183 BLOC1S2Q6QNY1 142 aa16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 IFIT1P09914 478 aaKnown RBP16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 GUCY1B3Q02153 619 aa16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 CREB3L3Q68CJ9 461 aa16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 TFIP11Q9UBB9 837 aaKnown RBP16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 CNPY2Q9Y2B0 182 aa16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
CTNNB1-202ENST00000396183 GADD45BO75293 160 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 HCLS1P14317 486 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 RAD50Q92878 1312 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 LTN1O94822 1766 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 GJB2P29033 226 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 GTF2E1P29083 439 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 HLFQ16534 295 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 FBXW7Q969H0 707 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 NFAT5O94916 1531 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 STARD3NLO95772 234 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 NASPP49321 788 aaPredicted RBP16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 LIMCH1Q9UPQ0 1083 aa16.69■□□□□ 0.26
CTNNB1-202ENST00000396183 METTL24Q5JXM2 366 aa16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 LDHAL6AQ6ZMR3 332 aa16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 TNS3Q68CZ2 1445 aa16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 IDH1O75874 414 aaKnown RBP16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 ADORA1P30542 326 aa16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 SKOR2Q2VWA4 1001 aaPredicted RBP16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
CTNNB1-202ENST00000396183 CCDC171Q6TFL3 1326 aa16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 VPS53Q5VIR6 699 aa16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 ZBTB1Q9Y2K1 713 aa16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 TTC41PQ6P2S7 1318 aa16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 A0A1B0GUL7 405 aa16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 LARP1BQ659C4 914 aaKnown RBP16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 PTMAP06454 111 aaKnown RBP16.67■□□□□ 0.26
CTNNB1-202ENST00000396183 MRE11P49959 708 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms