RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 TMEM67Q5HYA8 995 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 IQCA1Q86XH1 822 aa14.04□□□□□ -0.16
SIN3A-202ENST00000394947 HSPA4P34932 840 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 TRMT112Q9UI30 125 aaKnown RBP14.03□□□□□ -0.16
SIN3A-202ENST00000394947 CCDC174Q6PII3 467 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 CCDC155Q8N6L0 562 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 KCNK9Q9NPC2 374 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 PLIN2Q99541 437 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 TSPY2A6NKD2 308 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 ZEB2O60315 1214 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 RASA3Q14644 834 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 GPIHBP1Q8IV16 184 aa14.03□□□□□ -0.16
SIN3A-202ENST00000394947 PICALMQ13492 652 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 EXOC1Q9NV70 894 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 STARD3NLO95772 234 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 PLCB3Q01970 1234 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 SMC1BQ8NDV3 1235 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 ZNF287Q9HBT7 754 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.16
SIN3A-202ENST00000394947 CETN1Q12798 172 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 RAB34Q9BZG1 259 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 PFDN4Q9NQP4 134 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 RRAGBQ5VZM2 374 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 NECAB1Q8N987 351 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 IFT81Q8WYA0 676 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 CLSTN2Q9H4D0 955 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 A0A087WZG4 1122 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 DUSP27Q5VZP5 1158 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 ZBTB3Q9H5J0 574 aa14.02□□□□□ -0.17
SIN3A-202ENST00000394947 ATP5J2-PTCD1G3V325 749 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 CALM1P0DP23 149 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 CALM2P0DP24 149 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 CALM3P0DP25 149 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 MAP3K12Q12852 859 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 PSMD6Q15008 389 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 KAT14Q9H8E8 782 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 GNAT3A8MTJ3 354 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 TBC1D5Q92609 795 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 RAPGEF2Q9Y4G8 1499 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 PPP2R5DQ14738 602 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 TCP11L1Q9NUJ3 509 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 SLC5A1P13866 664 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 EPSTI1Q96J88 318 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 USP16Q9Y5T5 823 aa14.01□□□□□ -0.17
SIN3A-202ENST00000394947 IFIT5Q13325 482 aaKnown RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 PDE1CQ14123 709 aaPredicted RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 KARSQ15046 597 aaKnown RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 GEN1Q17RS7 908 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 HEATR3Q7Z4Q2 680 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 CCDC114Q96M63 670 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 FERMT1Q9BQL6 677 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 EHMT1Q9H9B1 1298 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 ANAPC4Q9UJX5 808 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 TLDC2A0PJX2 215 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 TAF7Q15545 349 aaPredicted RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 TNPO1Q92973 898 aaKnown RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 N4BP3O15049 544 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 SATB1Q01826 763 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 WDHD1O75717 1129 aaPredicted RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 STX1AQ16623 288 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 PPP1R21Q6ZMI0 780 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 CKAP4Q07065 602 aaKnown RBP14□□□□□ -0.17
SIN3A-202ENST00000394947 AKAP2Q9Y2D5 859 aa14□□□□□ -0.17
SIN3A-202ENST00000394947 LRRC43Q8N309 656 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 SBNO2Q9Y2G9 1366 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 STX6O43752 255 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 TTF1Q15361 905 aaPredicted RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 CCDC184Q52MB2 194 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 C20orf194Q5TEA3 1177 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 SREK1Q8WXA9 508 aaKnown RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 TCEANC2Q96MN5 208 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 TBCAO75347 108 aaKnown RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 MARCKSP29966 332 aaPredicted RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 RBM26Q5T8P6 1007 aaKnown RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 PKD2L1Q9P0L9 805 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 RNASE9P60153 205 aaKnown RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 KSR1Q8IVT5 923 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 UIMC1Q96RL1 719 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 UTP14AQ9BVJ6 771 aaKnown RBP13.99□□□□□ -0.17
SIN3A-202ENST00000394947 VPS18Q9P253 973 aa13.99□□□□□ -0.17
SIN3A-202ENST00000394947 AKR1B10O60218 316 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 NOL3O60936 208 aaKnown RBP13.98□□□□□ -0.17
SIN3A-202ENST00000394947 RHOXF2BP0C7M4 288 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 RHOXF2Q9BQY4 288 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 UBASH3AP57075 661 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 DNAI1Q9UI46 699 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 ARID4AP29374 1257 aaPredicted RBP13.98□□□□□ -0.17
SIN3A-202ENST00000394947 METAP2P50579 478 aaKnown RBP eCLIP13.98□□□□□ -0.17
SIN3A-202ENST00000394947 PDE3AQ14432 1141 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 BRD4O60885 1362 aaPredicted RBP13.98□□□□□ -0.17
SIN3A-202ENST00000394947 UBA7P41226 1012 aa13.98□□□□□ -0.17
SIN3A-202ENST00000394947 PNISRQ8TF01 805 aaKnown RBP13.98□□□□□ -0.17
SIN3A-202ENST00000394947 STX8Q9UNK0 236 aa13.97□□□□□ -0.17
SIN3A-202ENST00000394947 STAT6P42226 847 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms