RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 NLRP10Q86W26 655 aa30.45■■■□□ 2.46
LRFN4-202ENST00000393952 RGL2O15211 777 aa30.44■■■□□ 2.46
LRFN4-202ENST00000393952 UBN2Q6ZU65 1347 aa30.43■■■□□ 2.46
LRFN4-202ENST00000393952 IGHDP01880 384 aa30.43■■■□□ 2.46
LRFN4-202ENST00000393952 UBE3BQ7Z3V4 1068 aa30.43■■■□□ 2.46
LRFN4-202ENST00000393952 H7C1W4 665 aa30.42■■■□□ 2.46
LRFN4-202ENST00000393952 CASP7P55210 303 aa30.42■■■□□ 2.46
LRFN4-202ENST00000393952 CEP85Q6P2H3 762 aa30.42■■■□□ 2.46
LRFN4-202ENST00000393952 SIRT2Q8IXJ6 389 aa30.42■■■□□ 2.46
LRFN4-202ENST00000393952 ANO8Q9HCE9 1232 aaPredicted RBP30.42■■■□□ 2.46
LRFN4-202ENST00000393952 SUCLG2Q96I99 432 aa30.41■■■□□ 2.46
LRFN4-202ENST00000393952 NIP7Q9Y221 180 aaKnown RBP eCLIP30.41■■■□□ 2.46
LRFN4-202ENST00000393952 ANKRD44Q8N8A2 993 aa30.41■■■□□ 2.46
LRFN4-202ENST00000393952 RTL5Q5HYW3 569 aaPredicted RBP30.4■■■□□ 2.46
LRFN4-202ENST00000393952 RPAP2Q8IXW5 612 aaPredicted RBP30.4■■■□□ 2.46
LRFN4-202ENST00000393952 HDAC1Q13547 482 aaPredicted RBP30.39■■■□□ 2.46
LRFN4-202ENST00000393952 KAZALD1Q96I82 304 aa30.39■■■□□ 2.46
LRFN4-202ENST00000393952 RWDD1Q9H446 243 aaPredicted RBP30.39■■■□□ 2.46
LRFN4-202ENST00000393952 HDAC5Q9UQL6 1122 aa30.39■■■□□ 2.46
LRFN4-202ENST00000393952 KDM2BQ8NHM5 1336 aa30.39■■■□□ 2.46
LRFN4-202ENST00000393952 TBC1D9BQ66K14 1250 aa30.38■■■□□ 2.45
LRFN4-202ENST00000393952 PCCAP05165 728 aaPredicted RBP30.37■■■□□ 2.45
LRFN4-202ENST00000393952 PARP10Q53GL7 1025 aa30.37■■■□□ 2.45
LRFN4-202ENST00000393952 STK32BQ9NY57 414 aa30.37■■■□□ 2.45
LRFN4-202ENST00000393952 SUSD4Q5VX71 490 aa30.37■■■□□ 2.45
LRFN4-202ENST00000393952 BICDL1Q6ZP65 573 aa30.37■■■□□ 2.45
LRFN4-202ENST00000393952 COL23A1Q86Y22 540 aaPredicted RBP30.37■■■□□ 2.45
LRFN4-202ENST00000393952 ZBTB38Q8NAP3 1195 aaPredicted RBP30.37■■■□□ 2.45
LRFN4-202ENST00000393952 UPF1Q92900 1129 aaKnown RBP eCLIP30.37■■■□□ 2.45
LRFN4-202ENST00000393952 FAM89AQ96GI7 184 aa30.37■■■□□ 2.45
LRFN4-202ENST00000393952 SLC15A2Q16348 729 aa30.36■■■□□ 2.45
LRFN4-202ENST00000393952 TRMT112Q9UI30 125 aaKnown RBP30.36■■■□□ 2.45
LRFN4-202ENST00000393952 FAM177BA6PVY3 158 aa30.35■■■□□ 2.45
LRFN4-202ENST00000393952 ATP8B2P98198 1209 aa30.35■■■□□ 2.45
LRFN4-202ENST00000393952 FLAD1Q8NFF5 587 aa30.35■■■□□ 2.45
LRFN4-202ENST00000393952 BICC1Q9H694 974 aaKnown RBP30.35■■■□□ 2.45
LRFN4-202ENST00000393952 PNPLA7Q6ZV29 1317 aa30.35■■■□□ 2.45
LRFN4-202ENST00000393952 GYS1P13807 737 aa30.34■■■□□ 2.45
LRFN4-202ENST00000393952 EPHA10Q5JZY3 1008 aa30.34■■■□□ 2.45
LRFN4-202ENST00000393952 CENPQQ7L2Z9 268 aaPredicted RBP30.34■■■□□ 2.45
LRFN4-202ENST00000393952 SYNE4Q8N205 404 aa30.33■■■□□ 2.45
LRFN4-202ENST00000393952 UTP14AQ9BVJ6 771 aaKnown RBP30.33■■■□□ 2.45
LRFN4-202ENST00000393952 COL24A1Q17RW2 1714 aa30.33■■■□□ 2.45
LRFN4-202ENST00000393952 QSER1Q2KHR3 1735 aa30.33■■■□□ 2.45
LRFN4-202ENST00000393952 PNMA6EA0A0J9YXQ4 647 aa30.32■■■□□ 2.45
LRFN4-202ENST00000393952 MSH5O43196 834 aa30.32■■■□□ 2.45
LRFN4-202ENST00000393952 NTSR2O95665 410 aa30.32■■■□□ 2.44
LRFN4-202ENST00000393952 PPP1R42Q7Z4L9 355 aa30.32■■■□□ 2.44
LRFN4-202ENST00000393952 SETDB2Q96T68 719 aa30.32■■■□□ 2.44
LRFN4-202ENST00000393952 CDHR2Q9BYE9 1310 aa30.31■■■□□ 2.44
LRFN4-202ENST00000393952 HMMRO75330 724 aa30.3■■■□□ 2.44
LRFN4-202ENST00000393952 FOXO4P98177 505 aa30.29■■■□□ 2.44
LRFN4-202ENST00000393952 MTX1Q13505 466 aa30.29■■■□□ 2.44
LRFN4-202ENST00000393952 SH3TC1Q8TE82 1336 aa30.29■■■□□ 2.44
LRFN4-202ENST00000393952 NFIXQ14938 502 aa30.28■■■□□ 2.44
LRFN4-202ENST00000393952 SRGAP3O43295 1099 aa30.28■■■□□ 2.44
LRFN4-202ENST00000393952 IRS4O14654 1257 aaPredicted RBP30.27■■■□□ 2.44
LRFN4-202ENST00000393952 POLA2Q14181 598 aa30.27■■■□□ 2.44
LRFN4-202ENST00000393952 RABL6Q3YEC7 729 aaPredicted RBP30.27■■■□□ 2.44
LRFN4-202ENST00000393952 SSH3Q8TE77 659 aa30.27■■■□□ 2.44
LRFN4-202ENST00000393952 NUTM1Q86Y26 1132 aa30.26■■■□□ 2.43
LRFN4-202ENST00000393952 PLA2G12BQ9BX93 195 aa30.26■■■□□ 2.43
LRFN4-202ENST00000393952 LMBR1LQ6UX01 489 aa30.25■■■□□ 2.43
LRFN4-202ENST00000393952 DDX60Q8IY21 1712 aaKnown RBP30.25■■■□□ 2.43
LRFN4-202ENST00000393952 MYH3P11055 1940 aa30.25■■■□□ 2.43
LRFN4-202ENST00000393952 SMC5Q8IY18 1101 aa30.24■■■□□ 2.43
LRFN4-202ENST00000393952 CARMIL3Q8ND23 1372 aa30.24■■■□□ 2.43
LRFN4-202ENST00000393952 LAMB2P55268 1798 aa30.24■■■□□ 2.43
LRFN4-202ENST00000393952 ILDR2Q71H61 639 aa30.24■■■□□ 2.43
LRFN4-202ENST00000393952 NBPF5PQ86XG9 351 aaPredicted RBP30.24■■■□□ 2.43
LRFN4-202ENST00000393952 DCTPP1Q9H773 170 aa30.24■■■□□ 2.43
LRFN4-202ENST00000393952 HCLS1P14317 486 aaPredicted RBP30.23■■■□□ 2.43
LRFN4-202ENST00000393952 TM4SF1P30408 202 aa30.23■■■□□ 2.43
LRFN4-202ENST00000393952 ERFEQ4G0M1 354 aa30.23■■■□□ 2.43
LRFN4-202ENST00000393952 NYXQ9GZU5 481 aa30.23■■■□□ 2.43
LRFN4-202ENST00000393952 PDE8AO60658 829 aa30.21■■■□□ 2.43
LRFN4-202ENST00000393952 GCC1Q96CN9 775 aa30.21■■■□□ 2.43
LRFN4-202ENST00000393952 NLGN1Q8N2Q7 840 aa30.2■■■□□ 2.43
LRFN4-202ENST00000393952 CHMP3Q9Y3E7 222 aa30.2■■■□□ 2.43
LRFN4-202ENST00000393952 GTF2E1P29083 439 aaPredicted RBP30.2■■■□□ 2.42
LRFN4-202ENST00000393952 DDR1Q08345 913 aa30.2■■■□□ 2.42
LRFN4-202ENST00000393952 TPTE2Q6XPS3 522 aa30.2■■■□□ 2.42
LRFN4-202ENST00000393952 ABCC12Q96J65 1359 aa30.19■■■□□ 2.42
LRFN4-202ENST00000393952 CTSWP56202 376 aa30.19■■■□□ 2.42
LRFN4-202ENST00000393952 CSF1RP07333 972 aa30.18■■■□□ 2.42
LRFN4-202ENST00000393952 MSL1Q68DK7 614 aa30.18■■■□□ 2.42
LRFN4-202ENST00000393952 EXOC6BQ9Y2D4 811 aa30.18■■■□□ 2.42
LRFN4-202ENST00000393952 TTLL11Q8NHH1 800 aa30.17■■■□□ 2.42
LRFN4-202ENST00000393952 CCDC85AQ96PX6 553 aaPredicted RBP30.17■■■□□ 2.42
LRFN4-202ENST00000393952 PDGFDQ9GZP0 370 aaPredicted RBP30.17■■■□□ 2.42
LRFN4-202ENST00000393952 POLRMTO00411 1230 aaKnown RBP30.16■■■□□ 2.42
LRFN4-202ENST00000393952 HSP90B1P14625 803 aaKnown RBP30.16■■■□□ 2.42
LRFN4-202ENST00000393952 RFX5P48382 616 aaPredicted RBP30.16■■■□□ 2.42
LRFN4-202ENST00000393952 CCDC24Q8N4L8 307 aa30.16■■■□□ 2.42
LRFN4-202ENST00000393952 PDZRN3Q9UPQ7 1066 aa30.16■■■□□ 2.42
LRFN4-202ENST00000393952 PA2G4Q9UQ80 394 aaKnown RBP30.16■■■□□ 2.42
LRFN4-202ENST00000393952 CASZ1Q86V15 1759 aa30.16■■■□□ 2.42
LRFN4-202ENST00000393952 SURF6O75683 361 aaKnown RBP30.15■■■□□ 2.42
LRFN4-202ENST00000393952 SERPINB2P05120 415 aa30.15■■■□□ 2.42
LRFN4-202ENST00000393952 FAM161AQ3B820 660 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms