RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 KIF1BPQ96EK5 621 aa19.3■□□□□ 0.68
PHTF1-205ENST00000393357 ZFYVE9O95405 1425 aa19.3■□□□□ 0.68
PHTF1-205ENST00000393357 BRF1Q92994 677 aa19.3■□□□□ 0.68
PHTF1-205ENST00000393357 CWF19L2Q2TBE0 894 aaKnown RBP19.29■□□□□ 0.68
PHTF1-205ENST00000393357 CCDC129Q6ZRS4 1044 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 AOPEPQ8N6M6 819 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 KCNQ3O43525 872 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 IRX5P78411 483 aaPredicted RBP19.29■□□□□ 0.68
PHTF1-205ENST00000393357 GNL2Q13823 731 aaKnown RBP19.29■□□□□ 0.68
PHTF1-205ENST00000393357 TERF2Q15554 542 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 CHPF2Q9P2E5 772 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.29■□□□□ 0.68
PHTF1-205ENST00000393357 KIDINS220Q9ULH0 1771 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 SLFNL1Q499Z3 407 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 NEK11Q8NG66 645 aa19.29■□□□□ 0.68
PHTF1-205ENST00000393357 ZRSR1Q15695 479 aaKnown RBP19.28■□□□□ 0.68
PHTF1-205ENST00000393357 LRRC8AQ8IWT6 810 aa19.28■□□□□ 0.68
PHTF1-205ENST00000393357 TLR7Q9NYK1 1049 aaKnown RBP19.28■□□□□ 0.68
PHTF1-205ENST00000393357 ME1P48163 572 aa19.28■□□□□ 0.68
PHTF1-205ENST00000393357 SDF4Q9BRK5 362 aa19.28■□□□□ 0.68
PHTF1-205ENST00000393357 ZCCHC17Q9NP64 241 aaKnown RBP19.28■□□□□ 0.68
PHTF1-205ENST00000393357 GYS2P54840 703 aa19.27■□□□□ 0.68
PHTF1-205ENST00000393357 RUFY2Q8WXA3 655 aa19.27■□□□□ 0.68
PHTF1-205ENST00000393357 SEC62Q99442 399 aaKnown RBP19.27■□□□□ 0.68
PHTF1-205ENST00000393357 EYA1Q99502 592 aa19.27■□□□□ 0.68
PHTF1-205ENST00000393357 ZSWIM4Q9H7M6 989 aa19.27■□□□□ 0.68
PHTF1-205ENST00000393357 SLC52A1Q9NWF4 448 aa19.27■□□□□ 0.68
PHTF1-205ENST00000393357 STAP2Q9UGK3 403 aa19.27■□□□□ 0.68
PHTF1-205ENST00000393357 OTUD7BQ6GQQ9 843 aa19.27■□□□□ 0.67
PHTF1-205ENST00000393357 CCDC34Q96HJ3 373 aa19.27■□□□□ 0.67
PHTF1-205ENST00000393357 MAP2P11137 1827 aaKnown RBP19.27■□□□□ 0.67
PHTF1-205ENST00000393357 A0A0D9SFI3 127 aa19.26■□□□□ 0.67
PHTF1-205ENST00000393357 DNAJC2Q99543 621 aaKnown RBP19.26■□□□□ 0.67
PHTF1-205ENST00000393357 TRIM34Q9BYJ4 488 aa19.26■□□□□ 0.67
PHTF1-205ENST00000393357 SEC31AO94979 1220 aaKnown RBP19.26■□□□□ 0.67
PHTF1-205ENST00000393357 TEFQ10587 303 aa19.26■□□□□ 0.67
PHTF1-205ENST00000393357 CCAR1Q8IX12 1150 aaKnown RBP19.26■□□□□ 0.67
PHTF1-205ENST00000393357 NGDNQ8NEJ9 315 aaKnown RBP19.26■□□□□ 0.67
PHTF1-205ENST00000393357 ACEP12821 1306 aa19.26■□□□□ 0.67
PHTF1-205ENST00000393357 NCOA5Q9HCD5 579 aaKnown RBP19.25■□□□□ 0.67
PHTF1-205ENST00000393357 PAXBP1Q9Y5B6 917 aa19.25■□□□□ 0.67
PHTF1-205ENST00000393357 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
PHTF1-205ENST00000393357 VPS53Q5VIR6 699 aa19.25■□□□□ 0.67
PHTF1-205ENST00000393357 TMC6Q7Z403 805 aa19.25■□□□□ 0.67
PHTF1-205ENST00000393357 PIP4K2AP48426 406 aaPredicted RBP19.25■□□□□ 0.67
PHTF1-205ENST00000393357 ZNF397Q8NF99 534 aaPredicted RBP19.25■□□□□ 0.67
PHTF1-205ENST00000393357 NOL10Q9BSC4 688 aaKnown RBP19.25■□□□□ 0.67
PHTF1-205ENST00000393357 SETBP1Q9Y6X0 1596 aa19.24■□□□□ 0.67
PHTF1-205ENST00000393357 GLRX3O76003 335 aaKnown RBP19.24■□□□□ 0.67
PHTF1-205ENST00000393357 ARHGAP29Q52LW3 1261 aa19.24■□□□□ 0.67
PHTF1-205ENST00000393357 ZNF589Q86UQ0 364 aaPredicted RBP19.24■□□□□ 0.67
PHTF1-205ENST00000393357 LMTK2Q8IWU2 1503 aa19.24■□□□□ 0.67
PHTF1-205ENST00000393357 ZC3H13Q5T200 1668 aaKnown RBP19.24■□□□□ 0.67
PHTF1-205ENST00000393357 MYO3AQ8NEV4 1616 aa19.24■□□□□ 0.67
PHTF1-205ENST00000393357 KIAA0232Q92628 1395 aa19.24■□□□□ 0.67
PHTF1-205ENST00000393357 SLC27A2O14975 620 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 SCAND2PQ9GZW5 306 aaPredicted RBP19.23■□□□□ 0.67
PHTF1-205ENST00000393357 CLSTN2Q9H4D0 955 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 KIF24Q5T7B8 1368 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 A0A1B0GVL5 298 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 TIGD1Q96MW7 591 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 IL17REQ8NFR9 667 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 SSH3Q8TE77 659 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 ECHDC1Q9NTX5 307 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 PPP6R1Q9UPN7 881 aa19.23■□□□□ 0.67
PHTF1-205ENST00000393357 CCDC171Q6TFL3 1326 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 KINO60870 393 aaKnown RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 POLR3DP05423 398 aaPredicted RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 PLA2G4DQ86XP0 818 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 RBM33Q96EV2 1170 aaKnown RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 ZSCAN31Q96LW9 406 aaPredicted RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 ZSWIM6Q9HCJ5 1215 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 SH2B1Q9NRF2 756 aaPredicted RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 PTPRMP28827 1452 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 PRR36Q9H6K5 1346 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 URI1O94763 535 aaPredicted RBP19.22■□□□□ 0.67
PHTF1-205ENST00000393357 NLRP6P59044 892 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 CCDC73Q6ZRK6 1079 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 IFT172Q9UG01 1749 aa19.22■□□□□ 0.67
PHTF1-205ENST00000393357 CCDC66A2RUB6 948 aa19.21■□□□□ 0.67
PHTF1-205ENST00000393357 LMOD1P29536 600 aaPredicted RBP19.21■□□□□ 0.67
PHTF1-205ENST00000393357 TNNT3P45378 269 aaPredicted RBP19.21■□□□□ 0.67
PHTF1-205ENST00000393357 DDX19AQ9NUU7 478 aaKnown RBP19.21■□□□□ 0.67
PHTF1-205ENST00000393357 SF3A1Q15459 793 aaKnown RBP19.21■□□□□ 0.67
PHTF1-205ENST00000393357 NPHP3Q7Z494 1330 aa19.21■□□□□ 0.67
PHTF1-205ENST00000393357 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
PHTF1-205ENST00000393357 GNAT3A8MTJ3 354 aa19.21■□□□□ 0.67
PHTF1-205ENST00000393357 SLU7O95391 586 aaKnown RBP19.21■□□□□ 0.67
PHTF1-205ENST00000393357 FSIP1Q8NA03 581 aa19.21■□□□□ 0.67
PHTF1-205ENST00000393357 LGR6Q9HBX8 967 aa19.21■□□□□ 0.67
PHTF1-205ENST00000393357 PRAMEF22A3QJZ6 481 aa19.2■□□□□ 0.66
PHTF1-205ENST00000393357 ZNF446Q9NWS9 450 aa19.2■□□□□ 0.66
PHTF1-205ENST00000393357 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
PHTF1-205ENST00000393357 PDCP20941 246 aa19.2■□□□□ 0.66
PHTF1-205ENST00000393357 Q6ZUG5 572 aa19.2■□□□□ 0.66
PHTF1-205ENST00000393357 GJB4Q9NTQ9 266 aa19.2■□□□□ 0.66
PHTF1-205ENST00000393357 IFNKQ9P0W0 207 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms