RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PTPRCP08575 1304 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 NPHP1O15259 732 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 GTF2E1P29083 439 aaPredicted RBP8.62□□□□□ -1.03
UBBP1-201ENST00000392399 RARSP54136 660 aaKnown RBP8.62□□□□□ -1.03
UBBP1-201ENST00000392399 ST5P78524 1137 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 PRR5LQ6MZQ0 368 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 G2E3Q7L622 706 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 MRPL50Q8N5N7 158 aaKnown RBP8.62□□□□□ -1.03
UBBP1-201ENST00000392399 CNBD1Q8NA66 436 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 CCDC191Q8NCU4 936 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 SSH1Q8WYL5 1049 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 ISCA1Q9BUE6 129 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 METTL22Q9BUU2 404 aaPredicted RBP8.62□□□□□ -1.03
UBBP1-201ENST00000392399 SCN7AQ01118 1682 aa8.62□□□□□ -1.03
UBBP1-201ENST00000392399 IBTKQ9P2D0 1353 aaPredicted RBP8.61□□□□□ -1.03
UBBP1-201ENST00000392399 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
UBBP1-201ENST00000392399 GPTP24298 496 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 PDE6BP35913 854 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 NLRP10Q86W26 655 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 DNAAF4Q8WXU2 420 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 UTP14AQ9BVJ6 771 aaKnown RBP8.61□□□□□ -1.03
UBBP1-201ENST00000392399 SMC4Q9NTJ3 1288 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 MAP3K2Q9Y2U5 619 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 BCORQ6W2J9 1755 aa8.61□□□□□ -1.03
UBBP1-201ENST00000392399 KLRG2A4D1S0 409 aaPredicted RBP8.6□□□□□ -1.03
UBBP1-201ENST00000392399 IPO8O15397 1037 aaKnown RBP8.6□□□□□ -1.03
UBBP1-201ENST00000392399 SLC10A5Q5PT55 438 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 KLHL34Q8N239 644 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 LINS1Q8NG48 757 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 ARHGAP45Q92619 1136 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 MYD88Q99836 296 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 TRMT112Q9UI30 125 aaKnown RBP8.6□□□□□ -1.03
UBBP1-201ENST00000392399 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 ADCY9O60503 1353 aa8.6□□□□□ -1.03
UBBP1-201ENST00000392399 NUP98P52948 1817 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 UBN2Q6ZU65 1347 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 KIF16BQ96L93 1317 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 FAM177BA6PVY3 158 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 ATP5J2-PTCD1G3V325 749 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 H0YIN7 160 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 NTSR2O95665 410 aa8.59□□□□□ -1.03
UBBP1-201ENST00000392399 ZBTB38Q8NAP3 1195 aaPredicted RBP8.59□□□□□ -1.03
UBBP1-201ENST00000392399 API5Q9BZZ5 524 aaKnown RBP8.59□□□□□ -1.03
UBBP1-201ENST00000392399 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
UBBP1-201ENST00000392399 GOLGB1Q14789 3259 aaKnown RBP8.58□□□□□ -1.04
UBBP1-201ENST00000392399 SH3TC1Q8TE82 1336 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 NRXN2Q9P2S2 1712 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 RIC1Q4ADV7 1423 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 SPDYE4A6NLX3 237 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 NEURL1BA8MQ27 555 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 ALDH1L1O75891 902 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 PCCAP05165 728 aaPredicted RBP8.58□□□□□ -1.04
UBBP1-201ENST00000392399 IGKV5-2P06315 115 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 ERFEQ4G0M1 354 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 BEND3Q5T5X7 828 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 NLRP3Q96P20 1036 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 BCL2L13Q9BXK5 485 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 PIM2Q9P1W9 311 aa8.58□□□□□ -1.04
UBBP1-201ENST00000392399 NOB1Q9ULX3 412 aaKnown RBP8.58□□□□□ -1.04
UBBP1-201ENST00000392399 A0A0G2JLW4 131 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 SRGNP10124 158 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 DPEP1P16444 411 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 KCNA3P22001 575 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 ALDH1B1P30837 517 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 GCKRQ14397 625 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 NUTM1Q86Y26 1132 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 C2CD5Q86YS7 1000 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 NLGN2Q8NFZ4 835 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 MASTLQ96GX5 879 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 YTHDC1Q96MU7 727 aaKnown RBP8.57□□□□□ -1.04
UBBP1-201ENST00000392399 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
UBBP1-201ENST00000392399 F6X3S4 739 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 H7C1W4 665 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 GRIN3BO60391 1043 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 BCAR3O75815 825 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 NPR1P16066 1061 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CCT4P50991 539 aaKnown RBP8.56□□□□□ -1.04
UBBP1-201ENST00000392399 EVX2Q03828 476 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CWF19L2Q2TBE0 894 aaKnown RBP8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CRY2Q49AN0 593 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 STYK1Q6J9G0 422 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CHADLQ6NUI6 762 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 SLC4A10Q6U841 1118 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 ATF7IPQ6VMQ6 1270 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CCDC24Q8N4L8 307 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 TTLL6Q8N841 843 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 FAM89AQ96GI7 184 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 AFDNP55196 1824 aaKnown RBP8.56□□□□□ -1.04
UBBP1-201ENST00000392399 KIF13BQ9NQT8 1826 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 PXDNLA1KZ92 1463 aa8.56□□□□□ -1.04
UBBP1-201ENST00000392399 CDHR2Q9BYE9 1310 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 IRS4O14654 1257 aaPredicted RBP8.55□□□□□ -1.04
UBBP1-201ENST00000392399 PDE8AO60658 829 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 MS4A1P11836 297 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 CHRNA5P30532 468 aa8.55□□□□□ -1.04
UBBP1-201ENST00000392399 HOXA10P31260 410 aaPredicted RBP8.55□□□□□ -1.04
UBBP1-201ENST00000392399 SF3B3Q15393 1217 aaKnown RBP8.55□□□□□ -1.04
UBBP1-201ENST00000392399 GPR162Q16538 588 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms