RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 BTLAQ7Z6A9 289 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 NLRP8Q86W28 1048 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 PGBD3Q8N328 593 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 RNF217Q8TC41 542 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 ZIC5Q96T25 663 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 DUSP9Q99956 384 aaKnown RBP4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 SPG7Q9UQ90 795 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 GJA3Q9Y6H8 435 aa4.71□□□□□ -1.66
TRAJ40-201ENST00000390497 PNMA6FA0A0J9YX94 578 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 EIF1AYO14602 144 aaKnown RBP4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 F11P03951 625 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 MSX1P28360 303 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 GNA15P30679 374 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 IDH3AP50213 366 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 TSNAXIP1Q2TAA8 658 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 C6orf118Q5T5N4 469 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 TMEM87AQ8NBN3 555 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 CRISPLD1Q9H336 500 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 GGNBP2Q9H3C7 697 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 METTL5Q9NRN9 209 aaKnown RBP4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 RTCBQ9Y3I0 505 aaKnown RBP4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 DYRK1BQ9Y463 629 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 AK5Q9Y6K8 562 aa4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 SOS2Q07890 1332 aaPredicted RBP4.7□□□□□ -1.66
TRAJ40-201ENST00000390497 A0A1W2PNR3 127 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 EGFRP00533 1210 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 ZNF438Q7Z4V0 828 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 CMTR1Q8N1G2 835 aaKnown RBP4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 ZNF280CQ8ND82 737 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 C8orf37Q96NL8 207 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 EFCC1Q9HA90 598 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 NLRP2Q9NX02 1062 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 PPP4R2Q9NY27 417 aa4.69□□□□□ -1.66
TRAJ40-201ENST00000390497 FAM187AA6NFU0 413 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 UBAP1LF5GYI3 381 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 TNFRSF21O75509 655 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 RECKO95980 971 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 ATP4AP20648 1035 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 EFHC2Q5JST6 749 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 SAMD5Q5TGI4 173 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 FIGNL1Q6PIW4 674 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 LRRC69Q6ZNQ3 347 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 SNX29Q8TEQ0 813 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 CEP63Q96MT8 703 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 SRCIN1Q9C0H9 1055 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 ELP3Q9H9T3 547 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 ZFYVE28Q9HCC9 887 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 VTI1BQ9UEU0 232 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 WWC3Q9ULE0 1092 aa4.68□□□□□ -1.66
TRAJ40-201ENST00000390497 H7C1W4 665 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 AXIN1O15169 862 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 EIF4BP23588 611 aaKnown RBP4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 KCNQ4P56696 695 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 ZC3H6P61129 1189 aaKnown RBP4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 LAPTM4AQ15012 233 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 PKDCCQ504Y2 493 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 NLRP13Q86W25 1043 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 CRIPAKQ8N1N5 446 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 RNF34Q969K3 372 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 KCNMB2Q9Y691 235 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 SHROOM4Q9ULL8 1493 aa4.67□□□□□ -1.66
TRAJ40-201ENST00000390497 FIGNL2A6NMB9 653 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 PHACTR2O75167 634 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 XYLBO75191 536 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 RHOQP17081 205 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 ORC1Q13415 861 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 LAMC2Q13753 1193 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 TTC39BQ5VTQ0 682 aaPredicted RBP4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 CCDC74AQ96AQ1 378 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 GMCL1Q96IK5 515 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 HSH2DQ96JZ2 352 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 ZFP42Q96MM3 310 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 KCNH4Q9UQ05 1017 aa4.66□□□□□ -1.66
TRAJ40-201ENST00000390497 NRG2O14511 850 aaPredicted RBP4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 ERCC5P28715 1186 aaPredicted RBP4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 TYRO3Q06418 890 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 LDLRAD1Q5T700 205 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 CRELD1Q96HD1 420 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 DRC1Q96MC2 740 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 GAS2L1Q99501 681 aaPredicted RBP4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 CFHR5Q9BXR6 569 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 ZFYVE1Q9HBF4 777 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 BRD7Q9NPI1 651 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 ABI2Q9NYB9 513 aaPredicted RBP4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 USP35Q9P2H5 1018 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 PCDHGC4Q9Y5F7 938 aa4.65□□□□□ -1.67
TRAJ40-201ENST00000390497 MAN1A2O60476 641 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 FAM157BP0CG42 384 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 EDN3P14138 238 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 CES1P23141 567 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 ZNF76P36508 570 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 CCINQ13939 588 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 TRIM46Q7Z4K8 759 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 FAM161BQ96MY7 647 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 ZCCHC2Q9C0B9 1178 aaKnown RBP4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 RUBCNLQ9H714 662 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 C12orf49Q9H741 205 aa4.64□□□□□ -1.67
TRAJ40-201ENST00000390497 FAM8A1Q9UBU6 413 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms