RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 TMX3Q96JJ7 454 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 NEK1Q96PY6 1258 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 CFAP45Q9UL16 551 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 RBM8AQ9Y5S9 174 aaKnown RBP17.05■□□□□ 0.32
PSME4-201ENST00000389993 CHD1O14646 1710 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 TTC37Q6PGP7 1564 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 TIMM10P62072 90 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 ATP10AO60312 1499 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 CCDC173Q0VFZ6 552 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
PSME4-201ENST00000389993 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 JMYQ8N9B5 988 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 SETDB2Q96T68 719 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 NOL7Q9UMY1 257 aaKnown RBP17.05■□□□□ 0.32
PSME4-201ENST00000389993 LMTK3Q96Q04 1460 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 SEPT11Q9NVA2 429 aaKnown RBP17.04■□□□□ 0.32
PSME4-201ENST00000389993 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 ZBTB40Q9NUA8 1239 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 CYP7A1P22680 504 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 FAM98CQ17RN3 349 aaKnown RBP17.04■□□□□ 0.32
PSME4-201ENST00000389993 CNPY2Q9Y2B0 182 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
PSME4-201ENST00000389993 ESYT1Q9BSJ8 1104 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
PSME4-201ENST00000389993 FILIP1LQ4L180 1135 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 ZGPATQ8N5A5 531 aaKnown RBP17.03■□□□□ 0.32
PSME4-201ENST00000389993 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 SSRP1Q08945 709 aaKnown RBP17.03■□□□□ 0.32
PSME4-201ENST00000389993 WDR78Q5VTH9 848 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 TSPY2A6NKD2 308 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 SLC9C2Q5TAH2 1124 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 CEP57L1Q8IYX8 460 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 SLC4A4Q9Y6R1 1079 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 USP19O94966 1318 aa17.03■□□□□ 0.32
PSME4-201ENST00000389993 NLRP5P59047 1200 aa17.02■□□□□ 0.32
PSME4-201ENST00000389993 Q6ZUG5 572 aa17.02■□□□□ 0.32
PSME4-201ENST00000389993 UBA5Q9GZZ9 404 aa17.02■□□□□ 0.32
PSME4-201ENST00000389993 CCDC70Q6NSX1 233 aa17.02■□□□□ 0.32
PSME4-201ENST00000389993 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
PSME4-201ENST00000389993 IRS4O14654 1257 aaPredicted RBP17.02■□□□□ 0.32
PSME4-201ENST00000389993 MATR3P43243 847 aaKnown RBP eCLIP17.02■□□□□ 0.327e-24■■■■□ 21.7
PSME4-201ENST00000389993 STX6O43752 255 aa17.02■□□□□ 0.31
PSME4-201ENST00000389993 LIG1P18858 919 aa17.02■□□□□ 0.31
PSME4-201ENST00000389993 PLEKHM2Q8IWE5 1019 aa17.02■□□□□ 0.31
PSME4-201ENST00000389993 CDC5LQ99459 802 aaKnown RBP17.02■□□□□ 0.31
PSME4-201ENST00000389993 PNMA6EA0A0J9YXQ4 647 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 CCDC152Q4G0S7 254 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 CPLX3Q8WVH0 158 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 USP25Q9UHP3 1055 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 ZBTB7BO15156 539 aaPredicted RBP17.01■□□□□ 0.31
PSME4-201ENST00000389993 TTLL12Q14166 644 aaPredicted RBP17.01■□□□□ 0.31
PSME4-201ENST00000389993 GIMAP6Q6P9H5 292 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 ANKRD18AQ8IVF6 992 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 KLF18A0A0U1RQI7 1052 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 ZBTB9Q96C00 473 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 FAM182BQ5T319 152 aa17.01■□□□□ 0.31
PSME4-201ENST00000389993 TAF5LO75529 589 aa17■□□□□ 0.31
PSME4-201ENST00000389993 ODF2Q5BJF6 829 aa17■□□□□ 0.31
PSME4-201ENST00000389993 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
PSME4-201ENST00000389993 MAGEB6Q8N7X4 407 aa17■□□□□ 0.31
PSME4-201ENST00000389993 TOM1O60784 492 aa17■□□□□ 0.31
PSME4-201ENST00000389993 NBPF7P0C2Y1 421 aaPredicted RBP17■□□□□ 0.31
PSME4-201ENST00000389993 CFAP100Q494V2 611 aa17■□□□□ 0.31
PSME4-201ENST00000389993 RBM26Q5T8P6 1007 aaKnown RBP17■□□□□ 0.31
PSME4-201ENST00000389993 ZNF790Q6PG37 636 aa17■□□□□ 0.31
PSME4-201ENST00000389993 IQCA1Q86XH1 822 aa17■□□□□ 0.31
PSME4-201ENST00000389993 FSIP1Q8NA03 581 aa17■□□□□ 0.31
PSME4-201ENST00000389993 CTCFLQ8NI51 663 aaPredicted RBP17■□□□□ 0.31
PSME4-201ENST00000389993 GCC2Q8IWJ2 1684 aa17■□□□□ 0.31
PSME4-201ENST00000389993 BAG4O95429 457 aaKnown RBP17■□□□□ 0.31
PSME4-201ENST00000389993 ADGRL2O95490 1459 aa17■□□□□ 0.31
PSME4-201ENST00000389993 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
PSME4-201ENST00000389993 METAP2P50579 478 aaKnown RBP eCLIP16.99■□□□□ 0.31
PSME4-201ENST00000389993 ORC3Q9UBD5 711 aaPredicted RBP16.99■□□□□ 0.31
PSME4-201ENST00000389993 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 PPFIBP1Q86W92 1011 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 PAG1Q9NWQ8 432 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 TMOD2Q9NZR1 351 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 GNPATO15228 680 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 KCNQ4P56696 695 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 ARHGAP45Q92619 1136 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 ZNF830Q96NB3 372 aaPredicted RBP16.99■□□□□ 0.31
PSME4-201ENST00000389993 DEF6Q9H4E7 631 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 METP08581 1390 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 PIK3C2GO75747 1445 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 DNA2P51530 1060 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 UTP14AQ9BVJ6 771 aaKnown RBP16.99■□□□□ 0.31
PSME4-201ENST00000389993 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
PSME4-201ENST00000389993 TNNT3P45378 269 aaPredicted RBP16.98■□□□□ 0.31
PSME4-201ENST00000389993 TEX13AQ9BXU3 409 aaPredicted RBP16.98■□□□□ 0.31
PSME4-201ENST00000389993 TFCP2L1Q9NZI6 479 aa16.98■□□□□ 0.31
PSME4-201ENST00000389993 NSFL1CQ9UNZ2 370 aaKnown RBP16.98■□□□□ 0.31
PSME4-201ENST00000389993 TRPM2O94759 1503 aa16.98■□□□□ 0.31
PSME4-201ENST00000389993 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
PSME4-201ENST00000389993 TRMT1Q9NXH9 659 aaKnown RBP16.97■□□□□ 0.31
PSME4-201ENST00000389993 CIZ1Q9ULV3 898 aaPredicted RBP16.97■□□□□ 0.31
PSME4-201ENST00000389993 TBX22Q9Y458 520 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms