RNA–Protein interactions for RNA: ENST00000382254.5

CDH12-201, Transcript of cadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH12, Length 4,164 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-201ENST00000382254 SNX14Q9Y5W7 946 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 ZNF518AQ6AHZ1 1483 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 EPB41L2O43491 1005 aaKnown RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 XBP1P17861 261 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 GTF2E1P29083 439 aaPredicted RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 LMAN1P49257 510 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 SART3Q15020 963 aaKnown RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 ZSCAN16Q9H4T2 348 aaPredicted RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 DBF4Q9UBU7 674 aaPredicted RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 CTNNA3Q9UI47 895 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 SBNO2Q9Y2G9 1366 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 ABCC4O15439 1325 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 SOS1Q07889 1333 aaPredicted RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 LMOD1P29536 600 aaPredicted RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 MTHFSDQ2M296 383 aaKnown RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 ESCO1Q5FWF5 840 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 JAKMIP3Q5VZ66 844 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 JARID2Q92833 1246 aaPredicted RBP8.61□□□□□ -1.03
CDH12-201ENST00000382254 TSPYL1Q9H0U9 437 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 CEP126Q9P2H0 1117 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 TBC1D2BQ9UPU7 963 aa8.61□□□□□ -1.03
CDH12-201ENST00000382254 VPS53Q5VIR6 699 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 GTF3C6Q969F1 213 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 LRMPQ12912 555 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
CDH12-201ENST00000382254 IMMTQ16891 758 aaKnown RBP8.6□□□□□ -1.03
CDH12-201ENST00000382254 SYT10Q6XYQ8 523 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 DDX46Q7L014 1031 aaKnown RBP8.6□□□□□ -1.03
CDH12-201ENST00000382254 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 CCDC150Q8NCX0 1101 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 NUP133Q8WUM0 1156 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 MYD88Q99836 296 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 CHPF2Q9P2E5 772 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 MTMR7Q9Y216 660 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 NPATQ14207 1427 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 IBTKQ9P2D0 1353 aaPredicted RBP8.6□□□□□ -1.03
CDH12-201ENST00000382254 BRMS1Q9HCU9 246 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 TTC21BQ7Z4L5 1316 aa8.6□□□□□ -1.03
CDH12-201ENST00000382254 GOLGA8BA8MQT2 603 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 SGSM2O43147 1006 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 HAND2P61296 217 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 LARP1Q6PKG0 1096 aaKnown RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 CCDC82Q8N4S0 544 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 HMG20BQ9P0W2 317 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 ORC3Q9UBD5 711 aaPredicted RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 POLR1AO95602 1720 aaPredicted RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 YTHDC2Q9H6S0 1430 aaKnown RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 GOLIM4O00461 696 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 CDKL5O76039 1030 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 Q6ZUG5 572 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 CNNM3Q8NE01 707 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 KIF5CO60282 957 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 IFIT1P09914 478 aaKnown RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 UBASH3AP57075 661 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 RUFY3Q7L099 469 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 PHAXQ9H814 394 aaKnown RBP8.59□□□□□ -1.03
CDH12-201ENST00000382254 PYCARDQ9ULZ3 195 aa8.59□□□□□ -1.03
CDH12-201ENST00000382254 TRIM34Q9BYJ4 488 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 PREX2Q70Z35 1606 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 CHL1O00533 1208 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 ZNF75DP51815 510 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 ELF2Q15723 593 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 CCDC12Q8WUD4 166 aaPredicted RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 IFNKQ9P0W0 207 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 RAD50Q92878 1312 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 ADCY10Q96PN6 1610 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 TRPM2O94759 1503 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 IDH1O75874 414 aaKnown RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 HSPA4P34932 840 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 CEBPAP49715 358 aaPredicted RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 MCM6Q14566 821 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 CCDC57Q2TAC2 916 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDH12-201ENST00000382254 ARFGAP3Q9NP61 516 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 CNNM1Q9NRU3 951 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 ZNHIT6Q9NWK9 470 aaKnown RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 ABCC1P33527 1531 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 VPS37DQ86XT2 251 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 DEF6Q9H4E7 631 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 SNRKQ9NRH2 765 aa8.58□□□□□ -1.04
CDH12-201ENST00000382254 MAGEC2Q9UBF1 373 aaPredicted RBP8.58□□□□□ -1.04
CDH12-201ENST00000382254 RTL1A6NKG5 1358 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 ZFYVE9O95405 1425 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 LIG1P18858 919 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 CDC37L1Q7L3B6 337 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 CRACR2AQ9BSW2 395 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 PIP4K2AP48426 406 aaPredicted RBP8.57□□□□□ -1.04
CDH12-201ENST00000382254 CHST3Q7LGC8 479 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 ERO1AQ96HE7 468 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 GBP3Q9H0R5 595 aa8.57□□□□□ -1.04
CDH12-201ENST00000382254 RNF216Q9NWF9 866 aaPredicted RBP8.57□□□□□ -1.04
CDH12-201ENST00000382254 CROCC2H7BZ55 1655 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms