RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 ANKRD13DQ6ZTN6 518 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 NEBLO76041 1014 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 PRKCSHP14314 528 aaPredicted RBP18.5■□□□□ 0.55
COL2A1-202ENST00000380518 PPP4R3AQ6IN85 833 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 DYDC1Q8WWB3 177 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 PDE1AP54750 535 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 RPGRQ92834 1020 aaKnown RBP18.5■□□□□ 0.55
COL2A1-202ENST00000380518 UQCRFS1P1P0C7P4 283 aa18.49■□□□□ 0.55
COL2A1-202ENST00000380518 BRF1Q92994 677 aa18.49■□□□□ 0.55
COL2A1-202ENST00000380518 POTEB2H3BUK9 544 aa18.49■□□□□ 0.55
COL2A1-202ENST00000380518 IDEP14735 1019 aa18.49■□□□□ 0.55
COL2A1-202ENST00000380518 RBM27Q9P2N5 1060 aaKnown RBP18.49■□□□□ 0.55
COL2A1-202ENST00000380518 PKNOX2Q96KN3 472 aa18.49■□□□□ 0.55
COL2A1-202ENST00000380518 TSPY2A6NKD2 308 aa18.49■□□□□ 0.55
COL2A1-202ENST00000380518 ZFYP08048 801 aaPredicted RBP18.49■□□□□ 0.55
COL2A1-202ENST00000380518 CETN1Q12798 172 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 BAG3O95817 575 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 ZSCAN23Q3MJ62 389 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 CCDC178Q5BJE1 867 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 PANK2Q9BZ23 570 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 DNAI2Q9GZS0 605 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 HCLS1P14317 486 aaPredicted RBP18.48■□□□□ 0.55
COL2A1-202ENST00000380518 CBX1P83916 185 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 FAM114A1Q8IWE2 563 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 CCDC144CPQ8IYA2 1237 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 CCDC150Q8NCX0 1101 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 ANKRD24Q8TF21 1146 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 ALS2CR12Q96Q35 445 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 SLC26A6Q9BXS9 759 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 EHMT1Q9H9B1 1298 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 ANXA1P04083 346 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 SNW1Q13573 536 aaKnown RBP18.48■□□□□ 0.55
COL2A1-202ENST00000380518 LRSAM1Q6UWE0 723 aa18.48■□□□□ 0.55
COL2A1-202ENST00000380518 IFFO1Q0D2I5 559 aa18.47■□□□□ 0.55
COL2A1-202ENST00000380518 KAT14Q9H8E8 782 aa18.47■□□□□ 0.55
COL2A1-202ENST00000380518 NAA15Q9BXJ9 866 aaKnown RBP18.47■□□□□ 0.55
COL2A1-202ENST00000380518 CCDC40Q4G0X9 1142 aa18.47■□□□□ 0.55
COL2A1-202ENST00000380518 DDX46Q7L014 1031 aaKnown RBP18.47■□□□□ 0.55
COL2A1-202ENST00000380518 CCDC113Q9H0I3 377 aa18.47■□□□□ 0.55
COL2A1-202ENST00000380518 GSTTP1A0A1W2PQM5 241 aa18.47■□□□□ 0.55
COL2A1-202ENST00000380518 ESYT1Q9BSJ8 1104 aa18.47■□□□□ 0.55
COL2A1-202ENST00000380518 ALDH1L1O75891 902 aa18.46■□□□□ 0.55
COL2A1-202ENST00000380518 DNA2P51530 1060 aa18.46■□□□□ 0.55
COL2A1-202ENST00000380518 DENND4BO75064 1496 aaPredicted RBP18.46■□□□□ 0.55
COL2A1-202ENST00000380518 RBM25P49756 843 aaKnown RBP18.46■□□□□ 0.55
COL2A1-202ENST00000380518 SPTY2D1Q68D10 685 aaPredicted RBP18.46■□□□□ 0.55
COL2A1-202ENST00000380518 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
COL2A1-202ENST00000380518 KLF18A0A0U1RQI7 1052 aa18.46■□□□□ 0.55
COL2A1-202ENST00000380518 MAP2K1Q02750 393 aaPredicted RBP18.46■□□□□ 0.55
COL2A1-202ENST00000380518 CCDC91Q7Z6B0 441 aa18.46■□□□□ 0.55
COL2A1-202ENST00000380518 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.46■□□□□ 0.55
COL2A1-202ENST00000380518 NBPF7P0C2Y1 421 aaPredicted RBP18.46■□□□□ 0.54
COL2A1-202ENST00000380518 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 GIMAP6Q6P9H5 292 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 TTC21AQ8NDW8 1320 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 NECAB1Q8N987 351 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 BMP15O95972 392 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 SYKP43405 635 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 CEBPAP49715 358 aaPredicted RBP18.45■□□□□ 0.54
COL2A1-202ENST00000380518 FANCAO15360 1455 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
COL2A1-202ENST00000380518 TCERG1LQ5VWI1 586 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 KCNG4Q8TDN1 519 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 LRRC27Q9C0I9 530 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 CHPF2Q9P2E5 772 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 RBM8AQ9Y5S9 174 aaKnown RBP18.44■□□□□ 0.54
COL2A1-202ENST00000380518 PRIMPOLQ96LW4 560 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 RAB11FIP4Q86YS3 637 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 TMTC2Q8N394 836 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 MRPL50Q8N5N7 158 aaKnown RBP18.44■□□□□ 0.54
COL2A1-202ENST00000380518 SNX21Q969T3 373 aa18.44■□□□□ 0.54
COL2A1-202ENST00000380518 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 WTAPQ15007 396 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 SPECC1Q5M775 1068 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 STXBP4Q6ZWJ1 553 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 SCLT1Q96NL6 688 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 PAXBP1Q9Y5B6 917 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 LAMC3Q9Y6N6 1575 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 N4BP3O15049 544 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 ZBTB43O43298 467 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 PPFIA3O75145 1194 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 KRT23Q9C075 422 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 ISM2Q6H9L7 571 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 SMARCC1Q92922 1105 aaPredicted RBP18.43■□□□□ 0.54
COL2A1-202ENST00000380518 CRNKL1Q9BZJ0 848 aaKnown RBP18.43■□□□□ 0.54
COL2A1-202ENST00000380518 TAOK3Q9H2K8 898 aa18.43■□□□□ 0.54
COL2A1-202ENST00000380518 GRM8O00222 908 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 GNG11P61952 73 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 HLTFQ14527 1009 aaKnown RBP eCLIP18.42■□□□□ 0.54
COL2A1-202ENST00000380518 RMND1Q9NWS8 449 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 GCOM1H8Y6P7 765 aaPredicted RBP18.42■□□□□ 0.54
COL2A1-202ENST00000380518 POLR3GO15318 223 aaPredicted RBP18.42■□□□□ 0.54
COL2A1-202ENST00000380518 MYZAPP0CAP1 466 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 FBLN1P23142 703 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 FAM200AQ8TCP9 573 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 XAGE3Q8WTP9 111 aa18.42■□□□□ 0.54
COL2A1-202ENST00000380518 JARID2Q92833 1246 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms