RNA–Protein interactions for RNA: ENST00000379937.6

BRF1-203, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-203ENST00000379937 ZDHHC9Q9Y397 364 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 SNX14Q9Y5W7 946 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 KNDC1Q76NI1 1749 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 RAB11FIP3O75154 756 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 GRPEL1Q9HAV7 217 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 C1orf167Q5SNV9 1468 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 PCNTO95613 3336 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 VPS53Q5VIR6 699 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 CNPY2Q9Y2B0 182 aa18.8■□□□□ 0.6
BRF1-203ENST00000379937 RBM8AQ9Y5S9 174 aaKnown RBP18.8■□□□□ 0.6
BRF1-203ENST00000379937 HCLS1P14317 486 aaPredicted RBP18.79■□□□□ 0.6
BRF1-203ENST00000379937 PRIM1P49642 420 aaKnown RBP18.79■□□□□ 0.6
BRF1-203ENST00000379937 CAMK4Q16566 473 aa18.79■□□□□ 0.6
BRF1-203ENST00000379937 DBNLQ9UJU6 430 aaKnown RBP18.79■□□□□ 0.6
BRF1-203ENST00000379937 NRKQ7Z2Y5 1582 aa18.79■□□□□ 0.6
BRF1-203ENST00000379937 APPP05067 770 aa18.79■□□□□ 0.6
BRF1-203ENST00000379937 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
BRF1-203ENST00000379937 NAP1L5Q96NT1 182 aaPredicted RBP18.79■□□□□ 0.6
BRF1-203ENST00000379937 RRAGDQ9NQL2 400 aaPredicted RBP18.79■□□□□ 0.6
BRF1-203ENST00000379937 TTLL5Q6EMB2 1281 aa18.79■□□□□ 0.6
BRF1-203ENST00000379937 GLRX3O76003 335 aaKnown RBP18.78■□□□□ 0.6
BRF1-203ENST00000379937 SNX21Q969T3 373 aa18.78■□□□□ 0.6
BRF1-203ENST00000379937 TOMM22Q9NS69 142 aa18.78■□□□□ 0.6
BRF1-203ENST00000379937 SMC3Q9UQE7 1217 aa18.78■□□□□ 0.6
BRF1-203ENST00000379937 A0A087WWV3 80 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 RXRAP19793 462 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 HLFQ16534 295 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 CCDC82Q8N4S0 544 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 DCAF5Q96JK2 942 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 NPHP1O15259 732 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 ADORA1P30542 326 aa18.77■□□□□ 0.6
BRF1-203ENST00000379937 GPHNQ9NQX3 736 aaPredicted RBP18.77■□□□□ 0.6
BRF1-203ENST00000379937 MEGF6O75095 1541 aa18.77■□□□□ 0.59
BRF1-203ENST00000379937 SGSM2O43147 1006 aa18.77■□□□□ 0.59
BRF1-203ENST00000379937 CCDC144CPQ8IYA2 1237 aa18.77■□□□□ 0.59
BRF1-203ENST00000379937 PDRG1Q9NUG6 133 aa18.77■□□□□ 0.59
BRF1-203ENST00000379937 TAF5LO75529 589 aa18.76■□□□□ 0.59
BRF1-203ENST00000379937 IL2RBP14784 551 aa18.76■□□□□ 0.59
BRF1-203ENST00000379937 ARHGAP23Q9P227 1491 aa18.76■□□□□ 0.59
BRF1-203ENST00000379937 METTL22Q9BUU2 404 aaPredicted RBP18.76■□□□□ 0.59
BRF1-203ENST00000379937 WTIPA6NIX2 430 aaPredicted RBP18.75■□□□□ 0.59
BRF1-203ENST00000379937 NCOA5Q9HCD5 579 aaKnown RBP18.75■□□□□ 0.59
BRF1-203ENST00000379937 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
BRF1-203ENST00000379937 ERCC4Q92889 916 aaPredicted RBP18.74■□□□□ 0.59
BRF1-203ENST00000379937 CEMIPQ8WUJ3 1361 aa18.74■□□□□ 0.59
BRF1-203ENST00000379937 GPT2Q8TD30 523 aa18.74■□□□□ 0.59
BRF1-203ENST00000379937 MTMR7Q9Y216 660 aa18.74■□□□□ 0.59
BRF1-203ENST00000379937 ZKSCAN1P17029 563 aaPredicted RBP18.74■□□□□ 0.59
BRF1-203ENST00000379937 PIGBQ92521 554 aa18.74■□□□□ 0.59
BRF1-203ENST00000379937 JAK2O60674 1132 aa18.73■□□□□ 0.59
BRF1-203ENST00000379937 ZNF830Q96NB3 372 aaPredicted RBP18.73■□□□□ 0.59
BRF1-203ENST00000379937 INCENPQ9NQS7 918 aa18.73■□□□□ 0.59
BRF1-203ENST00000379937 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
BRF1-203ENST00000379937 IDH1O75874 414 aaKnown RBP18.73■□□□□ 0.59
BRF1-203ENST00000379937 GJB2P29033 226 aa18.73■□□□□ 0.59
BRF1-203ENST00000379937 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
BRF1-203ENST00000379937 OTUD7BQ6GQQ9 843 aa18.73■□□□□ 0.59
BRF1-203ENST00000379937 SPATA31A3Q5VYP0 1347 aa18.73■□□□□ 0.59
BRF1-203ENST00000379937 KDM4FA0A1W2PPD8 638 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
BRF1-203ENST00000379937 POLA2Q14181 598 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 RGPD2P0DJD1 1756 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 KCNQ2O43526 872 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 CCDC57Q2TAC2 916 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 CNNM1Q9NRU3 951 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 TRMT112Q9UI30 125 aaKnown RBP18.72■□□□□ 0.59
BRF1-203ENST00000379937 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
BRF1-203ENST00000379937 GJB4Q9NTQ9 266 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 TMEM63CQ9P1W3 806 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 ZBTB1Q9Y2K1 713 aa18.72■□□□□ 0.59
BRF1-203ENST00000379937 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
BRF1-203ENST00000379937 SLIT1O75093 1534 aa18.71■□□□□ 0.59
BRF1-203ENST00000379937 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
BRF1-203ENST00000379937 PTMAP06454 111 aaKnown RBP18.71■□□□□ 0.58
BRF1-203ENST00000379937 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.58
BRF1-203ENST00000379937 DNAJC5Q9H3Z4 198 aa18.71■□□□□ 0.58
BRF1-203ENST00000379937 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 CREB3L3Q68CJ9 461 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 DENND2AQ9ULE3 1009 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 CYP46A1Q9Y6A2 500 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 KDM6AO15550 1401 aaPredicted RBP18.7■□□□□ 0.58
BRF1-203ENST00000379937 NUCB2P80303 420 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 ME3Q16798 604 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 ZSCAN23Q3MJ62 389 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 USP48Q86UV5 1035 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 BRF1Q92994 677 aa18.7■□□□□ 0.58
BRF1-203ENST00000379937 CWC25Q9NXE8 425 aaPredicted RBP18.7■□□□□ 0.58
BRF1-203ENST00000379937 GTF2E1P29083 439 aaPredicted RBP18.69■□□□□ 0.58
BRF1-203ENST00000379937 FTOQ9C0B1 505 aaKnown RBP eCLIP18.69■□□□□ 0.58
BRF1-203ENST00000379937 ANKARQ7Z5J8 1434 aa18.69■□□□□ 0.58
BRF1-203ENST00000379937 SCARF1Q14162 830 aa18.69■□□□□ 0.58
BRF1-203ENST00000379937 RRP12Q5JTH9 1297 aaKnown RBP18.69■□□□□ 0.58
BRF1-203ENST00000379937 L1TD1Q5T7N2 865 aaKnown RBP18.69■□□□□ 0.58
BRF1-203ENST00000379937 PIBF1Q8WXW3 757 aa18.69■□□□□ 0.58
BRF1-203ENST00000379937 ANP32BQ92688 251 aaKnown RBP18.69■□□□□ 0.58
BRF1-203ENST00000379937 IFIT1P09914 478 aaKnown RBP18.69■□□□□ 0.58
BRF1-203ENST00000379937 LDHAL6AQ6ZMR3 332 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms