RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 NBPF6Q5VWK0 638 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 NBPF4Q96M43 638 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 RGL2O15211 777 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 HCLS1P14317 486 aaPredicted RBP9□□□□□ -0.97
GPCPD1-201ENST00000379019 TWISTNBQ3B726 338 aaPredicted RBP9□□□□□ -0.97
GPCPD1-201ENST00000379019 HSP90AB2PQ58FF8 381 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 CNPY2Q9Y2B0 182 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 ZKSCAN5Q9Y2L8 839 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 RGPD2P0DJD1 1756 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 A0A0G2JLW4 131 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 TCEANC2Q96MN5 208 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 FUCA2Q9BTY2 467 aa9□□□□□ -0.97
GPCPD1-201ENST00000379019 U2AF2P26368 475 aaKnown RBP eCLIP8.99□□□□□ -0.974e-7■■■■□ 25
GPCPD1-201ENST00000379019 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
GPCPD1-201ENST00000379019 C1orf141Q5JVX7 400 aa8.99□□□□□ -0.97
GPCPD1-201ENST00000379019 ERCC4Q92889 916 aaPredicted RBP8.99□□□□□ -0.97
GPCPD1-201ENST00000379019 EYA1Q99502 592 aa8.99□□□□□ -0.97
GPCPD1-201ENST00000379019 AKAP4Q5JQC9 854 aa8.99□□□□□ -0.97
GPCPD1-201ENST00000379019 MAPK8IP2Q13387 824 aaPredicted RBP8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 USP48Q86UV5 1035 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 USP27XA6NNY8 438 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 ANXA1P04083 346 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 TRIM37O94972 964 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 NKX2-3Q8TAU0 364 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 UPF2Q9HAU5 1272 aaKnown RBP8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 IL1RAPL2Q9NP60 686 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 BRD1O95696 1058 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 PTPN21Q16825 1174 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 BABAM1Q9NWV8 329 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 NDUFB9Q9Y6M9 179 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 FCHSD2O94868 740 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 SRCIN1Q9C0H9 1055 aa8.98□□□□□ -0.97
GPCPD1-201ENST00000379019 SCN11AQ9UI33 1791 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 PHKG2P15735 406 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 NEK4P51957 841 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 COL15A1P39059 1388 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 IBTKQ9P2D0 1353 aaPredicted RBP8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 PRAMEF22A3QJZ6 481 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 ADRA2BP18089 450 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 CCDC173Q0VFZ6 552 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 LRSAM1Q6UWE0 723 aa8.97□□□□□ -0.97
GPCPD1-201ENST00000379019 RC3H1Q5TC82 1133 aaKnown RBP8.96□□□□□ -0.97
GPCPD1-201ENST00000379019 FTOQ9C0B1 505 aaKnown RBP eCLIP8.96□□□□□ -0.97
GPCPD1-201ENST00000379019 TOGARAM1Q9Y4F4 1720 aa8.96□□□□□ -0.97
GPCPD1-201ENST00000379019 PDE1AP54750 535 aa8.96□□□□□ -0.98
GPCPD1-201ENST00000379019 TEX13AQ9BXU3 409 aaPredicted RBP8.96□□□□□ -0.98
GPCPD1-201ENST00000379019 CHMP4AQ9BY43 222 aa8.96□□□□□ -0.98
GPCPD1-201ENST00000379019 BCL2L12Q9HB09 334 aa8.96□□□□□ -0.98
GPCPD1-201ENST00000379019 AAMPQ13685 434 aa8.96□□□□□ -0.98
GPCPD1-201ENST00000379019 ITGB4P16144 1822 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 LMOD3Q0VAK6 560 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 RUFY3Q7L099 469 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 NGEFQ8N5V2 710 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 PHAXQ9H814 394 aaKnown RBP8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 TXNRD1Q16881 649 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 NFATC2IPQ8NCF5 419 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 LTV1Q96GA3 475 aaPredicted RBP8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 TMOD3Q9NYL9 352 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 BRPF1P55201 1214 aaPredicted RBP8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 ANKRD44Q8N8A2 993 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 PTH1RQ03431 593 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
GPCPD1-201ENST00000379019 KCNQ3O43525 872 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 CCDC144BQ3MJ40 725 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 CCDC144CPQ8IYA2 1237 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 CHMP3Q9Y3E7 222 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 BPTFQ12830 3046 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 TRIM44Q96DX7 344 aaPredicted RBP8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 V9GYY5 206 aaPredicted RBP8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 CNTNAP4Q9C0A0 1308 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 VGLL3A8MV65 326 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 CDC45O75419 566 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 EN1Q05925 392 aaPredicted RBP8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 ADCY9O60503 1353 aa8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 CALD1Q05682 793 aaKnown RBP8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 EDC3Q96F86 508 aaKnown RBP8.94□□□□□ -0.98
GPCPD1-201ENST00000379019 SOS1Q07889 1333 aaPredicted RBP8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 EZH2Q15910 746 aaKnown RBP8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 INTS3Q68E01 1043 aaKnown RBP8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 SLC15A2Q16348 729 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 ALDH1L2Q3SY69 923 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 PALLDQ8WX93 1383 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 NECAB1Q8N987 351 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 SPC24Q8NBT2 197 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 COL5A3P25940 1745 aaPredicted RBP8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 NBPF7P0C2Y1 421 aaPredicted RBP8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 LIG1P18858 919 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 CUL4AQ13619 759 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 SULT6B1Q6IMI4 303 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 ZNF530Q6P9A1 599 aaPredicted RBP8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 AKT1S1Q96B36 256 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 LAMA4Q16363 1823 aa8.93□□□□□ -0.98
GPCPD1-201ENST00000379019 UBR2Q8IWV8 1755 aa8.92□□□□□ -0.98
GPCPD1-201ENST00000379019 GTF2E1P29083 439 aaPredicted RBP8.92□□□□□ -0.98
GPCPD1-201ENST00000379019 SLC4A10Q6U841 1118 aa8.92□□□□□ -0.98
GPCPD1-201ENST00000379019 SPON1Q9HCB6 807 aa8.92□□□□□ -0.98
GPCPD1-201ENST00000379019 CIZ1Q9ULV3 898 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms