RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 TRIM27P14373 513 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 TNPO1Q92973 898 aaKnown RBP17.13■□□□□ 0.33
EXT1-201ENST00000378204 MPRIPQ6WCQ1 1025 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 ALS2CR12Q96Q35 445 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 CAMSAP2Q08AD1 1489 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 WDHD1O75717 1129 aaPredicted RBP17.13■□□□□ 0.33
EXT1-201ENST00000378204 SCLT1Q96NL6 688 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 TBC1D2Q9BYX2 928 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 ECHDC1Q9NTX5 307 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 MTIF2P46199 727 aaKnown RBP17.13■□□□□ 0.33
EXT1-201ENST00000378204 FLIIQ13045 1269 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 SEPT14Q6ZU15 432 aa17.13■□□□□ 0.33
EXT1-201ENST00000378204 MYCBPQ99417 103 aaPredicted RBP17.13■□□□□ 0.33
EXT1-201ENST00000378204 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 STAMBPO95630 424 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 UBE2HP62256 183 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 PIP4K2BP78356 416 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 MIPOL1Q8TD10 442 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
EXT1-201ENST00000378204 HMG20BQ9P0W2 317 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 C20orf194Q5TEA3 1177 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 SMC1AQ14683 1233 aaKnown RBP17.12■□□□□ 0.33
EXT1-201ENST00000378204 CTNNBL1Q8WYA6 563 aaPredicted RBP17.12■□□□□ 0.33
EXT1-201ENST00000378204 C16orf45Q96MC5 204 aaPredicted RBP17.12■□□□□ 0.33
EXT1-201ENST00000378204 PAXBP1Q9Y5B6 917 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
EXT1-201ENST00000378204 MAGI1Q96QZ7 1491 aaPredicted RBP17.12■□□□□ 0.33
EXT1-201ENST00000378204 SSFA2P28290 1259 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 LRCH2Q5VUJ6 765 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 IARSP41252 1262 aaKnown RBP17.11■□□□□ 0.33
EXT1-201ENST00000378204 NSD2O96028 1365 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 UBA7P41226 1012 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 TMEM67Q5HYA8 995 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 TBC1D9Q6ZT07 1266 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 STXBP4Q6ZWJ1 553 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 TRMT1Q9NXH9 659 aaKnown RBP17.11■□□□□ 0.33
EXT1-201ENST00000378204 FAM184BQ9ULE4 1060 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 TTC21AQ8NDW8 1320 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 MACROD2A1Z1Q3 448 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 PDE4BQ07343 736 aa17.11■□□□□ 0.33
EXT1-201ENST00000378204 CTNNA2P26232 953 aa17.1■□□□□ 0.33
EXT1-201ENST00000378204 GJB2P29033 226 aa17.1■□□□□ 0.33
EXT1-201ENST00000378204 NESP48681 1621 aa17.1■□□□□ 0.33
EXT1-201ENST00000378204 HLTFQ14527 1009 aaKnown RBP eCLIP17.1■□□□□ 0.33
EXT1-201ENST00000378204 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
EXT1-201ENST00000378204 ZNF165P49910 485 aa17.1■□□□□ 0.33
EXT1-201ENST00000378204 CDC5LQ99459 802 aaKnown RBP17.1■□□□□ 0.33
EXT1-201ENST00000378204 BAG3O95817 575 aa17.1■□□□□ 0.33
EXT1-201ENST00000378204 MICALL1Q8N3F8 863 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 FMNL3Q8IVF7 1028 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 TEX13AQ9BXU3 409 aaPredicted RBP17.09■□□□□ 0.33
EXT1-201ENST00000378204 CC2D2AQ9P2K1 1620 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 TMC6Q7Z403 805 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 NME9Q86XW9 330 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 CWC25Q9NXE8 425 aaPredicted RBP17.09■□□□□ 0.33
EXT1-201ENST00000378204 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
EXT1-201ENST00000378204 DNA2P51530 1060 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 MAP3K2Q9Y2U5 619 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 ADCY5O95622 1261 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 CPLX3Q8WVH0 158 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
EXT1-201ENST00000378204 MFSD6Q6ZSS7 791 aa17.08■□□□□ 0.33
EXT1-201ENST00000378204 VGLL3A8MV65 326 aa17.08■□□□□ 0.33
EXT1-201ENST00000378204 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.32
EXT1-201ENST00000378204 C6orf163Q5TEZ5 329 aa17.08■□□□□ 0.32
EXT1-201ENST00000378204 LDHAL6AQ6ZMR3 332 aa17.08■□□□□ 0.32
EXT1-201ENST00000378204 CCDC102BQ68D86 513 aa17.08■□□□□ 0.32
EXT1-201ENST00000378204 NEK1Q96PY6 1258 aa17.08■□□□□ 0.32
EXT1-201ENST00000378204 ARID4AP29374 1257 aaPredicted RBP17.08■□□□□ 0.32
EXT1-201ENST00000378204 WASLO00401 505 aaPredicted RBP17.08■□□□□ 0.32
EXT1-201ENST00000378204 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.32
EXT1-201ENST00000378204 FEZ1Q99689 392 aa17.08■□□□□ 0.32
EXT1-201ENST00000378204 LDHCP07864 332 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 TCERG1LQ5VWI1 586 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 BIN1O00499 593 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 NOP2P46087 812 aaKnown RBP17.07■□□□□ 0.32
EXT1-201ENST00000378204 SNW1Q13573 536 aaKnown RBP17.07■□□□□ 0.32
EXT1-201ENST00000378204 NAA25Q14CX7 972 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 NCOA7Q8NI08 942 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 LRRC27Q9C0I9 530 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 CCDC40Q4G0X9 1142 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 ORC3Q9UBD5 711 aaPredicted RBP17.07■□□□□ 0.32
EXT1-201ENST00000378204 DDX46Q7L014 1031 aaKnown RBP17.07■□□□□ 0.32
EXT1-201ENST00000378204 MICU3Q86XE3 530 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 KIAA0586Q9BVV6 1533 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 TSPY2A6NKD2 308 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 SPTY2D1Q68D10 685 aaPredicted RBP17.07■□□□□ 0.32
EXT1-201ENST00000378204 EHBP1Q8NDI1 1231 aa17.07■□□□□ 0.32
EXT1-201ENST00000378204 IFI16Q16666 785 aaKnown RBP17.06■□□□□ 0.32
EXT1-201ENST00000378204 CEP57Q86XR8 500 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 C10orf67Q8IYJ2 551 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 KAT14Q9H8E8 782 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 GDPD2Q9HCC8 539 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 IDEP14735 1019 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 UVSSAQ2YD98 709 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 SYCP3Q8IZU3 236 aa17.06■□□□□ 0.32
EXT1-201ENST00000378204 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms