RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 ERBB3P21860 1342 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 GJB2P29033 226 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 UVSSAQ2YD98 709 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 CCDC83Q8IWF9 413 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 RBM8AQ9Y5S9 174 aaKnown RBP21.79■■□□□ 1.08
TDP2-202ENST00000378198 IGKV5-2P06315 115 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 CCDC8Q9H0W5 538 aaPredicted RBP21.78■■□□□ 1.08
TDP2-202ENST00000378198 SLC52A2Q9HAB3 445 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.78■■□□□ 1.08
TDP2-202ENST00000378198 MRC1P22897 1456 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 ADAMTSL3P82987 1691 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 PDIA4P13667 645 aaKnown RBP21.78■■□□□ 1.08
TDP2-202ENST00000378198 PSMA5P28066 241 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 NMIQ13287 307 aaPredicted RBP21.78■■□□□ 1.08
TDP2-202ENST00000378198 CREB3L3Q68CJ9 461 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 RAPGEF4Q8WZA2 1011 aa21.78■■□□□ 1.08
TDP2-202ENST00000378198 AFDNP55196 1824 aaKnown RBP21.77■■□□□ 1.08
TDP2-202ENST00000378198 NEURL1BA8MQ27 555 aa21.76■■□□□ 1.07
TDP2-202ENST00000378198 KCNJ4P48050 445 aa21.76■■□□□ 1.07
TDP2-202ENST00000378198 NPHP3Q7Z494 1330 aa21.76■■□□□ 1.07
TDP2-202ENST00000378198 TERF1P54274 439 aa21.76■■□□□ 1.07
TDP2-202ENST00000378198 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
TDP2-202ENST00000378198 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.76■■□□□ 1.07
TDP2-202ENST00000378198 C1orf167Q5SNV9 1468 aa21.76■■□□□ 1.07
TDP2-202ENST00000378198 KDM6AO15550 1401 aaPredicted RBP21.75■■□□□ 1.07
TDP2-202ENST00000378198 GCKRQ14397 625 aa21.75■■□□□ 1.07
TDP2-202ENST00000378198 RNF20Q5VTR2 975 aa21.75■■□□□ 1.07
TDP2-202ENST00000378198 METTL22Q9BUU2 404 aaPredicted RBP21.75■■□□□ 1.07
TDP2-202ENST00000378198 MTMR6Q9Y217 621 aa21.75■■□□□ 1.07
TDP2-202ENST00000378198 ABCC6O95255 1503 aa21.75■■□□□ 1.07
TDP2-202ENST00000378198 SLC39A6Q13433 755 aa21.75■■□□□ 1.07
TDP2-202ENST00000378198 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
TDP2-202ENST00000378198 ME3Q16798 604 aa21.74■■□□□ 1.07
TDP2-202ENST00000378198 XAGE3Q8WTP9 111 aa21.74■■□□□ 1.07
TDP2-202ENST00000378198 FSD1Q9BTV5 496 aa21.74■■□□□ 1.07
TDP2-202ENST00000378198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.74■■□□□ 1.072e-7■■□□□ 13.3
TDP2-202ENST00000378198 SLC27A2O14975 620 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 PHKG2P15735 406 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 SIL1Q9H173 461 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 BOLA2Q9H3K6 86 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 TLR7Q9NYK1 1049 aaKnown RBP21.73■■□□□ 1.07
TDP2-202ENST00000378198 MYL6BP14649 208 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
TDP2-202ENST00000378198 ANKRD1Q15327 319 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 COPS6Q7L5N1 327 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 PROSER2Q86WR7 435 aaPredicted RBP21.73■■□□□ 1.07
TDP2-202ENST00000378198 MYD88Q99836 296 aa21.73■■□□□ 1.07
TDP2-202ENST00000378198 ALDH8A1Q9H2A2 487 aaPredicted RBP21.73■■□□□ 1.07
TDP2-202ENST00000378198 FIBPO43427 364 aa21.72■■□□□ 1.07
TDP2-202ENST00000378198 ZC3H6P61129 1189 aaKnown RBP21.72■■□□□ 1.07
TDP2-202ENST00000378198 ST3GAL1Q11201 340 aa21.72■■□□□ 1.07
TDP2-202ENST00000378198 COL18A1P39060 1754 aa21.72■■□□□ 1.07
TDP2-202ENST00000378198 MED23Q9ULK4 1368 aa21.72■■□□□ 1.07
TDP2-202ENST00000378198 A0A0D9SFI3 127 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 NFATC2IPQ8NCF5 419 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 COPRSQ9NQ92 184 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 PLEKHG2Q9H7P9 1386 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 JCADQ9P266 1359 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 ARFGEF2Q9Y6D5 1785 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 IFNL2Q8IZJ0 200 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 HMG20BQ9P0W2 317 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 TPCN1Q9ULQ1 816 aa21.71■■□□□ 1.07
TDP2-202ENST00000378198 BLOC1S2Q6QNY1 142 aa21.7■■□□□ 1.06
TDP2-202ENST00000378198 ANKRD13DQ6ZTN6 518 aa21.7■■□□□ 1.06
TDP2-202ENST00000378198 DNM1Q05193 864 aaKnown RBP21.7■■□□□ 1.06
TDP2-202ENST00000378198 TSGA10IPQ3SY00 556 aa21.7■■□□□ 1.06
TDP2-202ENST00000378198 C19orf44Q9H6X5 657 aa21.7■■□□□ 1.06
TDP2-202ENST00000378198 COL15A1P39059 1388 aa21.69■■□□□ 1.06
TDP2-202ENST00000378198 PTMAP06454 111 aaKnown RBP21.69■■□□□ 1.06
TDP2-202ENST00000378198 SNRPA1P09661 255 aaKnown RBP21.69■■□□□ 1.06
TDP2-202ENST00000378198 EPHA10Q5JZY3 1008 aa21.69■■□□□ 1.06
TDP2-202ENST00000378198 KLHDC4Q8TBB5 520 aa21.69■■□□□ 1.06
TDP2-202ENST00000378198 ZNF496Q96IT1 587 aaPredicted RBP21.69■■□□□ 1.06
TDP2-202ENST00000378198 VPS37CA5D8V6 355 aaPredicted RBP21.68■■□□□ 1.06
TDP2-202ENST00000378198 RRP9O43818 475 aaKnown RBP21.68■■□□□ 1.06
TDP2-202ENST00000378198 PDCP20941 246 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 NECAB1Q8N987 351 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 PKD1L3Q7Z443 1732 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 MEGF6O75095 1541 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 ATP5JP18859 108 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 RPS6KB1P23443 525 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 LARP1BQ659C4 914 aaKnown RBP21.68■■□□□ 1.06
TDP2-202ENST00000378198 DDX54Q8TDD1 881 aaKnown RBP21.68■■□□□ 1.06
TDP2-202ENST00000378198 LAMB4A4D0S4 1761 aa21.68■■□□□ 1.06
TDP2-202ENST00000378198 LRP10Q7Z4F1 713 aa21.67■■□□□ 1.06
TDP2-202ENST00000378198 TTC5Q8N0Z6 440 aa21.67■■□□□ 1.06
TDP2-202ENST00000378198 RFX7Q2KHR2 1363 aa21.67■■□□□ 1.06
TDP2-202ENST00000378198 RFX5P48382 616 aaPredicted RBP21.67■■□□□ 1.06
TDP2-202ENST00000378198 DCAF5Q96JK2 942 aa21.67■■□□□ 1.06
TDP2-202ENST00000378198 HSP90AA2PQ14568 343 aaPredicted RBP21.66■■□□□ 1.06
TDP2-202ENST00000378198 RABL6Q3YEC7 729 aaPredicted RBP21.66■■□□□ 1.06
TDP2-202ENST00000378198 USP16Q9Y5T5 823 aa21.66■■□□□ 1.06
TDP2-202ENST00000378198 KRT32Q14532 448 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 TNNI3KQ59H18 835 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 USPL1Q5W0Q7 1092 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 FMNL2Q96PY5 1086 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 FUCA2Q9BTY2 467 aa21.65■■□□□ 1.06
TDP2-202ENST00000378198 FPGT-TNNI3KV9GXZ4 949 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms