RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 BABAM1Q9NWV8 329 aa27.32■■□□□ 1.96
FOXA2-201ENST00000377115 ADAMTS13Q76LX8 1427 aa27.32■■□□□ 1.96
FOXA2-201ENST00000377115 SMTNL1A8MU46 457 aa27.31■■□□□ 1.96
FOXA2-201ENST00000377115 NWD1Q149M9 1564 aa27.31■■□□□ 1.96
FOXA2-201ENST00000377115 LARP1Q6PKG0 1096 aaKnown RBP27.31■■□□□ 1.96
FOXA2-201ENST00000377115 TAF6LQ9Y6J9 622 aa27.31■■□□□ 1.96
FOXA2-201ENST00000377115 SLC27A2O14975 620 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 IFIT2P09913 472 aaKnown RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 HOXC9P31274 260 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 USHBP1Q8N6Y0 703 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 LEO1Q8WVC0 666 aaPredicted RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 EVI5LQ96CN4 794 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 DNAJC25Q9H1X3 360 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 CLSTN2Q9H4D0 955 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 CHD2O14647 1828 aaKnown RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 NR1I2O75469 434 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 PDCP20941 246 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 NMIQ13287 307 aaPredicted RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 RBM43Q6ZSC3 357 aaKnown RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 NGDNQ8NEJ9 315 aaKnown RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 TDRD7Q8NHU6 1098 aaKnown RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 MAP4K1Q92918 833 aa27.3■■□□□ 1.96
FOXA2-201ENST00000377115 SCAND2PQ9GZW5 306 aaPredicted RBP27.3■■□□□ 1.96
FOXA2-201ENST00000377115 FEZ1Q99689 392 aa27.29■■□□□ 1.96
FOXA2-201ENST00000377115 DDX19AQ9NUU7 478 aaKnown RBP27.29■■□□□ 1.96
FOXA2-201ENST00000377115 NPHP3Q7Z494 1330 aa27.29■■□□□ 1.96
FOXA2-201ENST00000377115 NUTM2GQ5VZR2 741 aa27.29■■□□□ 1.96
FOXA2-201ENST00000377115 CACTINQ8WUQ7 758 aaKnown RBP27.29■■□□□ 1.96
FOXA2-201ENST00000377115 GPATCH3Q96I76 525 aa27.29■■□□□ 1.96
FOXA2-201ENST00000377115 STK3Q13188 491 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 CCDC144BQ3MJ40 725 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 AACSQ86V21 672 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 CCDC144CPQ8IYA2 1237 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 ADCY9O60503 1353 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 ZNF165P49910 485 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 CLIP2Q9UDT6 1046 aa27.28■■□□□ 1.96
FOXA2-201ENST00000377115 PIK3C2AO00443 1686 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 TMEM2Q9UHN6 1383 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 NLRP6P59044 892 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 EIF4A1P60842 406 aaKnown RBP27.27■■□□□ 1.96
FOXA2-201ENST00000377115 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.27■■□□□ 1.96
FOXA2-201ENST00000377115 PGBD1Q96JS3 809 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 BCL11BQ9C0K0 894 aaPredicted RBP27.27■■□□□ 1.96
FOXA2-201ENST00000377115 CTNNA3Q9UI47 895 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.27■■□□□ 1.96
FOXA2-201ENST00000377115 PTPRUQ92729 1446 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 OGFRQ9NZT2 677 aa27.27■■□□□ 1.96
FOXA2-201ENST00000377115 KCNQ3O43525 872 aa27.26■■□□□ 1.95
FOXA2-201ENST00000377115 PSMA5P28066 241 aa27.26■■□□□ 1.95
FOXA2-201ENST00000377115 TOB2Q14106 344 aaPredicted RBP27.26■■□□□ 1.95
FOXA2-201ENST00000377115 BLOC1S2Q6QNY1 142 aa27.26■■□□□ 1.95
FOXA2-201ENST00000377115 BICD2Q8TD16 824 aa27.26■■□□□ 1.95
FOXA2-201ENST00000377115 MTX1Q13505 466 aa27.26■■□□□ 1.95
FOXA2-201ENST00000377115 SYCP1Q15431 976 aa27.26■■□□□ 1.95
FOXA2-201ENST00000377115 TPD52L1Q16890 204 aaPredicted RBP27.26■■□□□ 1.95
FOXA2-201ENST00000377115 A0A0D9SFI3 127 aa27.25■■□□□ 1.95
FOXA2-201ENST00000377115 CCDC112Q8NEF3 446 aa27.25■■□□□ 1.95
FOXA2-201ENST00000377115 PDIA4P13667 645 aaKnown RBP27.24■■□□□ 1.95
FOXA2-201ENST00000377115 RPS6KB1P23443 525 aa27.24■■□□□ 1.95
FOXA2-201ENST00000377115 NPHP4O75161 1426 aaPredicted RBP27.24■■□□□ 1.95
FOXA2-201ENST00000377115 ZNF592Q92610 1267 aa27.23■■□□□ 1.95
FOXA2-201ENST00000377115 LGR6Q9HBX8 967 aa27.23■■□□□ 1.95
FOXA2-201ENST00000377115 PAXBP1Q9Y5B6 917 aa27.23■■□□□ 1.95
FOXA2-201ENST00000377115 ADGRL3Q9HAR2 1447 aa27.23■■□□□ 1.95
FOXA2-201ENST00000377115 SLC26A8Q96RN1 970 aa27.22■■□□□ 1.95
FOXA2-201ENST00000377115 C9orf78Q9NZ63 289 aaPredicted RBP27.22■■□□□ 1.95
FOXA2-201ENST00000377115 DIP2BQ9P265 1576 aa27.22■■□□□ 1.95
FOXA2-201ENST00000377115 RGPD8O14715 1765 aaPredicted RBP27.21■■□□□ 1.95
FOXA2-201ENST00000377115 JAK2O60674 1132 aa27.21■■□□□ 1.95
FOXA2-201ENST00000377115 ARID5BQ14865 1188 aa27.21■■□□□ 1.95
FOXA2-201ENST00000377115 ANKRD1Q15327 319 aa27.21■■□□□ 1.95
FOXA2-201ENST00000377115 CCDC8Q9H0W5 538 aaPredicted RBP27.21■■□□□ 1.95
FOXA2-201ENST00000377115 CEMIPQ8WUJ3 1361 aa27.21■■□□□ 1.95
FOXA2-201ENST00000377115 TLR7Q9NYK1 1049 aaKnown RBP27.21■■□□□ 1.95
FOXA2-201ENST00000377115 USP27XA6NNY8 438 aa27.2■■□□□ 1.95
FOXA2-201ENST00000377115 FAM69CQ0P6D2 419 aa27.2■■□□□ 1.95
FOXA2-201ENST00000377115 ERC1Q8IUD2 1116 aa27.2■■□□□ 1.95
FOXA2-201ENST00000377115 EAF2Q96CJ1 260 aaPredicted RBP27.2■■□□□ 1.95
FOXA2-201ENST00000377115 ESF1Q9H501 851 aaKnown RBP27.2■■□□□ 1.95
FOXA2-201ENST00000377115 CGNQ9P2M7 1197 aaKnown RBP27.2■■□□□ 1.95
FOXA2-201ENST00000377115 LTKP29376 864 aa27.2■■□□□ 1.94
FOXA2-201ENST00000377115 CEP135Q66GS9 1140 aa27.2■■□□□ 1.94
FOXA2-201ENST00000377115 DDX11Q96FC9 970 aa27.2■■□□□ 1.94
FOXA2-201ENST00000377115 TSPOAP1O95153 1857 aa27.2■■□□□ 1.94
FOXA2-201ENST00000377115 DDX41Q9UJV9 622 aaKnown RBP27.19■■□□□ 1.94
FOXA2-201ENST00000377115 SASH1O94885 1247 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 CWF19L2Q2TBE0 894 aaKnown RBP27.19■■□□□ 1.94
FOXA2-201ENST00000377115 RNF20Q5VTR2 975 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 ZNF589Q86UQ0 364 aaPredicted RBP27.19■■□□□ 1.94
FOXA2-201ENST00000377115 FSD1Q9BTV5 496 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 BOLA2Q9H3K6 86 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 PODXL2Q9NZ53 605 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 MAP3K2Q9Y2U5 619 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 TNRQ92752 1358 aa27.19■■□□□ 1.94
FOXA2-201ENST00000377115 HIP1O00291 1037 aa27.18■■□□□ 1.94
FOXA2-201ENST00000377115 SNRKQ9NRH2 765 aa27.18■■□□□ 1.94
FOXA2-201ENST00000377115 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.18■■□□□ 1.94
FOXA2-201ENST00000377115 C11orf57Q6ZUT1 292 aaPredicted RBP27.18■■□□□ 1.94
FOXA2-201ENST00000377115 LRRC8AQ8IWT6 810 aa27.18■■□□□ 1.94
FOXA2-201ENST00000377115 CDC25BP30305 580 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms