RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 UBTFL1P0CB47 393 aaPredicted RBP28.81■■■□□ 2.2
HLA-C-202ENST00000376237 GPTP24298 496 aa28.81■■■□□ 2.2
HLA-C-202ENST00000376237 GYS1P13807 737 aa28.8■■■□□ 2.2
HLA-C-202ENST00000376237 MSH5O43196 834 aa28.79■■■□□ 2.2
HLA-C-202ENST00000376237 PPP1R42Q7Z4L9 355 aa28.79■■■□□ 2.2
HLA-C-202ENST00000376237 SETDB2Q96T68 719 aa28.79■■■□□ 2.2
HLA-C-202ENST00000376237 ANKRD36CQ5JPF3 1778 aa28.78■■■□□ 2.2
HLA-C-202ENST00000376237 UBN2Q6ZU65 1347 aa28.78■■■□□ 2.2
HLA-C-202ENST00000376237 H7C1W4 665 aa28.78■■■□□ 2.2
HLA-C-202ENST00000376237 GNAI2P04899 355 aa28.78■■■□□ 2.2
HLA-C-202ENST00000376237 NBPF7P0C2Y1 421 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-202ENST00000376237 TBC1D9BQ66K14 1250 aa28.78■■■□□ 2.2
HLA-C-202ENST00000376237 NLGN1Q8N2Q7 840 aa28.78■■■□□ 2.2
HLA-C-202ENST00000376237 ZBTB38Q8NAP3 1195 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-202ENST00000376237 PCCAP05165 728 aaPredicted RBP28.77■■■□□ 2.2
HLA-C-202ENST00000376237 QSER1Q2KHR3 1735 aa28.77■■■□□ 2.2
HLA-C-202ENST00000376237 TUBGCP6Q96RT7 1819 aa28.75■■■□□ 2.19
HLA-C-202ENST00000376237 SUSD4Q5VX71 490 aa28.74■■■□□ 2.19
HLA-C-202ENST00000376237 UBE3BQ7Z3V4 1068 aa28.74■■■□□ 2.19
HLA-C-202ENST00000376237 UTP14AQ9BVJ6 771 aaKnown RBP28.74■■■□□ 2.19
HLA-C-202ENST00000376237 PPP4R2Q9NY27 417 aa28.74■■■□□ 2.19
HLA-C-202ENST00000376237 TRMT112Q9UI30 125 aaKnown RBP28.74■■■□□ 2.19
HLA-C-202ENST00000376237 AFDNP55196 1824 aaKnown RBP28.74■■■□□ 2.19
HLA-C-202ENST00000376237 BICDL1Q6ZP65 573 aa28.74■■■□□ 2.19
HLA-C-202ENST00000376237 CASP7P55210 303 aa28.73■■■□□ 2.19
HLA-C-202ENST00000376237 SLC16A10Q8TF71 515 aa28.73■■■□□ 2.19
HLA-C-202ENST00000376237 NYXQ9GZU5 481 aa28.73■■■□□ 2.19
HLA-C-202ENST00000376237 NFIXQ14938 502 aa28.72■■■□□ 2.19
HLA-C-202ENST00000376237 CDHR2Q9BYE9 1310 aa28.71■■■□□ 2.19
HLA-C-202ENST00000376237 HSP90B1P14625 803 aaKnown RBP28.71■■■□□ 2.19
HLA-C-202ENST00000376237 TM4SF1P30408 202 aa28.71■■■□□ 2.19
HLA-C-202ENST00000376237 RPAP2Q8IXW5 612 aaPredicted RBP28.71■■■□□ 2.19
HLA-C-202ENST00000376237 LRRFIP2Q9Y608 721 aaKnown RBP28.71■■■□□ 2.19
HLA-C-202ENST00000376237 CARMIL3Q8ND23 1372 aa28.71■■■□□ 2.19
HLA-C-202ENST00000376237 SH3TC1Q8TE82 1336 aa28.71■■■□□ 2.19
HLA-C-202ENST00000376237 NTSR2O95665 410 aa28.7■■■□□ 2.19
HLA-C-202ENST00000376237 FAM89AQ96GI7 184 aa28.7■■■□□ 2.19
HLA-C-202ENST00000376237 TPTE2Q6XPS3 522 aa28.69■■■□□ 2.18
HLA-C-202ENST00000376237 C1orf115Q9H7X2 142 aa28.69■■■□□ 2.18
HLA-C-202ENST00000376237 PCDHB15Q9Y5E8 787 aa28.69■■■□□ 2.18
HLA-C-202ENST00000376237 SUCLG2Q96I99 432 aa28.69■■■□□ 2.18
HLA-C-202ENST00000376237 NBPF5PQ86XG9 351 aaPredicted RBP28.68■■■□□ 2.18
HLA-C-202ENST00000376237 FAM177BA6PVY3 158 aa28.67■■■□□ 2.18
HLA-C-202ENST00000376237 RTL5Q5HYW3 569 aaPredicted RBP28.67■■■□□ 2.18
HLA-C-202ENST00000376237 JARID2Q92833 1246 aaPredicted RBP28.67■■■□□ 2.18
HLA-C-202ENST00000376237 PLA2G12BQ9BX93 195 aa28.67■■■□□ 2.18
HLA-C-202ENST00000376237 GTF2E1P29083 439 aaPredicted RBP28.66■■■□□ 2.18
HLA-C-202ENST00000376237 CEP85Q6P2H3 762 aa28.66■■■□□ 2.18
HLA-C-202ENST00000376237 ANKRD44Q8N8A2 993 aa28.66■■■□□ 2.18
HLA-C-202ENST00000376237 IRS4O14654 1257 aaPredicted RBP28.65■■■□□ 2.18
HLA-C-202ENST00000376237 KAZALD1Q96I82 304 aa28.65■■■□□ 2.18
HLA-C-202ENST00000376237 CCDC136Q96JN2 1154 aa28.65■■■□□ 2.18
HLA-C-202ENST00000376237 MTX1Q13505 466 aa28.64■■■□□ 2.18
HLA-C-202ENST00000376237 COL24A1Q17RW2 1714 aa28.64■■■□□ 2.18
HLA-C-202ENST00000376237 SERPINB2P05120 415 aa28.64■■■□□ 2.17
HLA-C-202ENST00000376237 ATP8B2P98198 1209 aa28.64■■■□□ 2.17
HLA-C-202ENST00000376237 BICC1Q9H694 974 aaKnown RBP28.64■■■□□ 2.17
HLA-C-202ENST00000376237 POLRMTO00411 1230 aaKnown RBP28.63■■■□□ 2.17
HLA-C-202ENST00000376237 PDE8AO60658 829 aa28.63■■■□□ 2.17
HLA-C-202ENST00000376237 HMMRO75330 724 aa28.63■■■□□ 2.17
HLA-C-202ENST00000376237 RABL6Q3YEC7 729 aaPredicted RBP28.63■■■□□ 2.17
HLA-C-202ENST00000376237 SLC10A5Q5PT55 438 aa28.63■■■□□ 2.17
HLA-C-202ENST00000376237 RWDD1Q9H446 243 aaPredicted RBP28.63■■■□□ 2.17
HLA-C-202ENST00000376237 NPHP1O15259 732 aa28.62■■■□□ 2.17
HLA-C-202ENST00000376237 HDAC1Q13547 482 aaPredicted RBP28.62■■■□□ 2.17
HLA-C-202ENST00000376237 R3HDM1Q15032 1099 aaKnown RBP28.62■■■□□ 2.17
HLA-C-202ENST00000376237 SYNE4Q8N205 404 aa28.62■■■□□ 2.17
HLA-C-202ENST00000376237 FOXO4P98177 505 aa28.61■■■□□ 2.17
HLA-C-202ENST00000376237 DDR1Q08345 913 aa28.61■■■□□ 2.17
HLA-C-202ENST00000376237 NUTM1Q86Y26 1132 aa28.61■■■□□ 2.17
HLA-C-202ENST00000376237 CNBD1Q8NA66 436 aa28.61■■■□□ 2.17
HLA-C-202ENST00000376237 PARP3Q9Y6F1 533 aa28.61■■■□□ 2.17
HLA-C-202ENST00000376237 MMP10P09238 476 aa28.6■■■□□ 2.17
HLA-C-202ENST00000376237 ERFEQ4G0M1 354 aa28.6■■■□□ 2.17
HLA-C-202ENST00000376237 EPHA10Q5JZY3 1008 aa28.6■■■□□ 2.17
HLA-C-202ENST00000376237 PDGFDQ9GZP0 370 aaPredicted RBP28.6■■■□□ 2.17
HLA-C-202ENST00000376237 MSL1Q68DK7 614 aa28.59■■■□□ 2.17
HLA-C-202ENST00000376237 SIRT2Q8IXJ6 389 aa28.59■■■□□ 2.17
HLA-C-202ENST00000376237 CSF1RP07333 972 aa28.58■■■□□ 2.17
HLA-C-202ENST00000376237 ST5P78524 1137 aa28.58■■■□□ 2.17
HLA-C-202ENST00000376237 PRR5LQ6MZQ0 368 aa28.58■■■□□ 2.17
HLA-C-202ENST00000376237 LMBR1LQ6UX01 489 aa28.58■■■□□ 2.17
HLA-C-202ENST00000376237 SRGAP3O43295 1099 aa28.57■■■□□ 2.16
HLA-C-202ENST00000376237 HCLS1P14317 486 aaPredicted RBP28.57■■■□□ 2.16
HLA-C-202ENST00000376237 CTSWP56202 376 aa28.57■■■□□ 2.16
HLA-C-202ENST00000376237 SSH3Q8TE77 659 aa28.57■■■□□ 2.16
HLA-C-202ENST00000376237 PNMA6EA0A0J9YXQ4 647 aa28.56■■■□□ 2.16
HLA-C-202ENST00000376237 B4GALNT3Q6L9W6 998 aa28.56■■■□□ 2.16
HLA-C-202ENST00000376237 POLA2Q14181 598 aa28.55■■■□□ 2.16
HLA-C-202ENST00000376237 TTLL11Q8NHH1 800 aa28.55■■■□□ 2.16
HLA-C-202ENST00000376237 NLRP3Q96P20 1036 aa28.55■■■□□ 2.16
HLA-C-202ENST00000376237 MTFR1LQ9H019 292 aa28.55■■■□□ 2.16
HLA-C-202ENST00000376237 RIC1Q4ADV7 1423 aa28.55■■■□□ 2.16
HLA-C-202ENST00000376237 IGHDP01880 384 aa28.53■■■□□ 2.16
HLA-C-202ENST00000376237 ABCC12Q96J65 1359 aa28.53■■■□□ 2.16
HLA-C-202ENST00000376237 CHMP3Q9Y3E7 222 aa28.53■■■□□ 2.16
HLA-C-202ENST00000376237 SF3B3Q15393 1217 aaKnown RBP28.52■■■□□ 2.16
HLA-C-202ENST00000376237 CCDC152Q4G0S7 254 aa28.52■■■□□ 2.16
HLA-C-202ENST00000376237 CENPQQ7L2Z9 268 aaPredicted RBP28.51■■■□□ 2.15
HLA-C-202ENST00000376237 CASZ1Q86V15 1759 aa28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms