RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 HTRA3P83110 453 aa18.56■□□□□ 0.56
NELFE-201ENST00000375425 UTP14AQ9BVJ6 771 aaKnown RBP18.56■□□□□ 0.56
NELFE-201ENST00000375425 TNRC6CQ9HCJ0 1690 aaKnown RBP18.55■□□□□ 0.56
NELFE-201ENST00000375425 APAF1O14727 1248 aa18.55■□□□□ 0.56
NELFE-201ENST00000375425 C3orf67Q6ZVT6 689 aa18.55■□□□□ 0.56
NELFE-201ENST00000375425 SYNE4Q8N205 404 aa18.55■□□□□ 0.56
NELFE-201ENST00000375425 RBM17Q96I25 401 aaKnown RBP18.55■□□□□ 0.56
NELFE-201ENST00000375425 NLRP3Q96P20 1036 aa18.55■□□□□ 0.56
NELFE-201ENST00000375425 HSP90AB3PQ58FF7 597 aa18.54■□□□□ 0.56
NELFE-201ENST00000375425 SLC10A5Q5PT55 438 aa18.54■□□□□ 0.56
NELFE-201ENST00000375425 HDGFL1Q5TGJ6 251 aa18.54■□□□□ 0.56
NELFE-201ENST00000375425 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
NELFE-201ENST00000375425 CACNA1SQ13698 1873 aa18.53■□□□□ 0.56
NELFE-201ENST00000375425 TIAM2Q8IVF5 1701 aa18.53■□□□□ 0.56
NELFE-201ENST00000375425 HOXB7P09629 217 aa18.53■□□□□ 0.56
NELFE-201ENST00000375425 TCIRG1Q13488 830 aa18.53■□□□□ 0.56
NELFE-201ENST00000375425 CRAMP1Q96RY5 1269 aa18.53■□□□□ 0.56
NELFE-201ENST00000375425 MBIPQ9NS73 344 aa18.53■□□□□ 0.56
NELFE-201ENST00000375425 RIC1Q4ADV7 1423 aa18.52■□□□□ 0.56
NELFE-201ENST00000375425 ARFGEF2Q9Y6D5 1785 aa18.52■□□□□ 0.56
NELFE-201ENST00000375425 IARSP41252 1262 aaKnown RBP18.52■□□□□ 0.56
NELFE-201ENST00000375425 DUSP27Q5VZP5 1158 aa18.52■□□□□ 0.56
NELFE-201ENST00000375425 CC2D2BQ6DHV5 1058 aa18.52■□□□□ 0.56
NELFE-201ENST00000375425 NLRP10Q86W26 655 aa18.52■□□□□ 0.56
NELFE-201ENST00000375425 TCERG1O14776 1098 aaKnown RBP18.51■□□□□ 0.55
NELFE-201ENST00000375425 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
NELFE-201ENST00000375425 PSMD1Q99460 953 aa18.51■□□□□ 0.55
NELFE-201ENST00000375425 DBF4Q9UBU7 674 aaPredicted RBP18.51■□□□□ 0.55
NELFE-201ENST00000375425 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
NELFE-201ENST00000375425 TRMT112Q9UI30 125 aaKnown RBP18.5■□□□□ 0.55
NELFE-201ENST00000375425 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
NELFE-201ENST00000375425 HCLS1P14317 486 aaPredicted RBP18.49■□□□□ 0.55
NELFE-201ENST00000375425 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
NELFE-201ENST00000375425 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 SLC51AQ86UW1 340 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 IFT57Q9NWB7 429 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 IQCA1LA6NCM1 817 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 FZD9O00144 591 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 PPEF1O14829 653 aaPredicted RBP18.49■□□□□ 0.55
NELFE-201ENST00000375425 POTEIP0CG38 1075 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 POTEJP0CG39 1038 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 GNAI1P63096 354 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 CALD1Q05682 793 aaKnown RBP18.49■□□□□ 0.55
NELFE-201ENST00000375425 GRIPAP1Q4V328 841 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 CCDC184Q52MB2 194 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 PLBD2Q8NHP8 589 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 ZNF428Q96B54 188 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 KLRG1Q96E93 195 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
NELFE-201ENST00000375425 RNF123Q5XPI4 1314 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 ZNF541Q9H0D2 1346 aa18.49■□□□□ 0.55
NELFE-201ENST00000375425 SNED1Q8TER0 1413 aa18.48■□□□□ 0.55
NELFE-201ENST00000375425 ELL2O00472 640 aaPredicted RBP18.48■□□□□ 0.55
NELFE-201ENST00000375425 HYPKQ9NX55 129 aa18.48■□□□□ 0.55
NELFE-201ENST00000375425 SH3TC1Q8TE82 1336 aa18.47■□□□□ 0.55
NELFE-201ENST00000375425 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
NELFE-201ENST00000375425 TMX4Q9H1E5 349 aaPredicted RBP18.47■□□□□ 0.55
NELFE-201ENST00000375425 TAF1DQ9H5J8 278 aaPredicted RBP18.46■□□□□ 0.55
NELFE-201ENST00000375425 ATP6V0A2Q9Y487 856 aa18.46■□□□□ 0.55
NELFE-201ENST00000375425 ABCC4O15439 1325 aa18.45■□□□□ 0.54
NELFE-201ENST00000375425 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
NELFE-201ENST00000375425 BBOX1O75936 387 aa18.45■□□□□ 0.54
NELFE-201ENST00000375425 LARGE2Q8N3Y3 721 aa18.45■□□□□ 0.54
NELFE-201ENST00000375425 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
NELFE-201ENST00000375425 DDX46Q7L014 1031 aaKnown RBP18.44■□□□□ 0.54
NELFE-201ENST00000375425 GPC2Q8N158 579 aa18.44■□□□□ 0.54
NELFE-201ENST00000375425 HACL1Q9UJ83 578 aa18.44■□□□□ 0.54
NELFE-201ENST00000375425 EIF6P56537 245 aaKnown RBP18.43■□□□□ 0.54
NELFE-201ENST00000375425 C8orf58Q8NAV2 365 aa18.43■□□□□ 0.54
NELFE-201ENST00000375425 FAM89AQ96GI7 184 aa18.43■□□□□ 0.54
NELFE-201ENST00000375425 PHAXQ9H814 394 aaKnown RBP18.43■□□□□ 0.54
NELFE-201ENST00000375425 EAPPQ56P03 285 aaPredicted RBP18.42■□□□□ 0.54
NELFE-201ENST00000375425 RIC3Q7Z5B4 369 aa18.42■□□□□ 0.54
NELFE-201ENST00000375425 LDHDQ86WU2 507 aa18.42■□□□□ 0.54
NELFE-201ENST00000375425 SP8Q8IXZ3 490 aa18.42■□□□□ 0.54
NELFE-201ENST00000375425 JMYQ8N9B5 988 aa18.42■□□□□ 0.54
NELFE-201ENST00000375425 EPHX2P34913 555 aa18.41■□□□□ 0.54
NELFE-201ENST00000375425 TRIM28Q13263 835 aaKnown RBP18.41■□□□□ 0.54
NELFE-201ENST00000375425 GRAPQ13588 217 aa18.41■□□□□ 0.54
NELFE-201ENST00000375425 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
NELFE-201ENST00000375425 GRAPLQ8TC17 118 aaPredicted RBP18.41■□□□□ 0.54
NELFE-201ENST00000375425 GJA3Q9Y6H8 435 aa18.41■□□□□ 0.54
NELFE-201ENST00000375425 ZNF316A6NFI3 1004 aaPredicted RBP18.4■□□□□ 0.54
NELFE-201ENST00000375425 PPIP5K2O43314 1243 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 DPP8Q6V1X1 898 aaPredicted RBP18.4■□□□□ 0.54
NELFE-201ENST00000375425 VPS33BQ9H267 617 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 CLEC11AQ9Y240 323 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 GOLGA2Q08379 1002 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 AOC3Q16853 763 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
NELFE-201ENST00000375425 NIM1KQ8IY84 436 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 MPNDQ8N594 471 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 SUPT20HQ8NEM7 779 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 RTFDC1Q9BY42 306 aaPredicted RBP18.4■□□□□ 0.54
NELFE-201ENST00000375425 COL4A5P29400 1685 aa18.4■□□□□ 0.54
NELFE-201ENST00000375425 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
NELFE-201ENST00000375425 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.53
NELFE-201ENST00000375425 TSPYL6Q8N831 410 aa18.39■□□□□ 0.53
NELFE-201ENST00000375425 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms