RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 RUFY2Q8WXA3 655 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 EVI5LQ96CN4 794 aa18.72■□□□□ 0.59
TMEM50A-201ENST00000374358 MEGF6O75095 1541 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 NEURL1BA8MQ27 555 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 KCNJ4P48050 445 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 SLC52A2Q9HAB3 445 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 OVOS2A0A0G2JMS6 1433 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 GJB2P29033 226 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 MPNDQ8N594 471 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 CAMTA1Q9Y6Y1 1673 aa18.71■□□□□ 0.59
TMEM50A-201ENST00000374358 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.58
TMEM50A-201ENST00000374358 MSNP26038 577 aaKnown RBP18.7■□□□□ 0.58
TMEM50A-201ENST00000374358 NECTIN1Q15223 517 aa18.7■□□□□ 0.58
TMEM50A-201ENST00000374358 ME3Q16798 604 aa18.7■□□□□ 0.58
TMEM50A-201ENST00000374358 FSD1Q9BTV5 496 aa18.7■□□□□ 0.58
TMEM50A-201ENST00000374358 UTYO14607 1347 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 PHKG2P15735 406 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 CREB3L3Q68CJ9 461 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 ZNF589Q86UQ0 364 aaPredicted RBP18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 CCDC9Q9Y3X0 531 aaKnown RBP18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 PTCD1O75127 700 aaKnown RBP18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 CSB-PGBD3P0DP91 1061 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 GCKRQ14397 625 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 TSPY26PQ9H489 355 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 ZSWIM6Q9HCJ5 1215 aa18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.69■□□□□ 0.58
TMEM50A-201ENST00000374358 F13A1P00488 732 aa18.68■□□□□ 0.58
TMEM50A-201ENST00000374358 TPCN1Q9ULQ1 816 aa18.68■□□□□ 0.58
TMEM50A-201ENST00000374358 CYP46A1Q9Y6A2 500 aa18.68■□□□□ 0.58
TMEM50A-201ENST00000374358 VPS37CA5D8V6 355 aaPredicted RBP18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 DNM1Q05193 864 aaKnown RBP18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 LARP1Q6PKG0 1096 aaKnown RBP18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 NEXNQ0ZGT2 675 aa18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 UBE3BQ7Z3V4 1068 aa18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 SLC27A2O14975 620 aa18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 CYP27B1O15528 508 aa18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 MTMR6Q9Y217 621 aa18.67■□□□□ 0.58
TMEM50A-201ENST00000374358 ADAMTS7Q9UKP4 1686 aa18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 TATP17735 454 aaPredicted RBP18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 MAP4K1Q92918 833 aa18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 SCN11AQ9UI33 1791 aa18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 ZKSCAN1P17029 563 aaPredicted RBP18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 FAM173BQ6P4H8 233 aa18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 FERMT3Q86UX7 667 aa18.66■□□□□ 0.58
TMEM50A-201ENST00000374358 LRP10Q7Z4F1 713 aa18.65■□□□□ 0.58
TMEM50A-201ENST00000374358 SYAP1Q96A49 352 aaPredicted RBP18.65■□□□□ 0.58
TMEM50A-201ENST00000374358 METTL22Q9BUU2 404 aaPredicted RBP18.65■□□□□ 0.58
TMEM50A-201ENST00000374358 DBNLQ9UJU6 430 aaKnown RBP18.65■□□□□ 0.58
TMEM50A-201ENST00000374358 ANKRD13DQ6ZTN6 518 aa18.65■□□□□ 0.58
TMEM50A-201ENST00000374358 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
TMEM50A-201ENST00000374358 TFCP2Q12800 502 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 COL15A1P39059 1388 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 CCDC129Q6ZRS4 1044 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 TMEM87AQ8NBN3 555 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 KCNB2Q92953 911 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 HDAC5Q9UQL6 1122 aa18.64■□□□□ 0.57
TMEM50A-201ENST00000374358 HCLS1P14317 486 aaPredicted RBP18.63■□□□□ 0.57
TMEM50A-201ENST00000374358 STK3Q13188 491 aa18.63■□□□□ 0.57
TMEM50A-201ENST00000374358 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
TMEM50A-201ENST00000374358 ALS2Q96Q42 1657 aa18.63■□□□□ 0.57
TMEM50A-201ENST00000374358 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
TMEM50A-201ENST00000374358 TM6SF1Q9BZW5 370 aa18.63■□□□□ 0.57
TMEM50A-201ENST00000374358 ADAMTSL3P82987 1691 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 PTPN12Q05209 780 aaKnown RBP18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 IFNL2Q8IZJ0 200 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 CHMP3Q9Y3E7 222 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 DNAJC2Q99543 621 aaKnown RBP18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 USP25Q9UHP3 1055 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 MED23Q9ULK4 1368 aa18.62■□□□□ 0.57
TMEM50A-201ENST00000374358 RFX5P48382 616 aaPredicted RBP18.61■□□□□ 0.57
TMEM50A-201ENST00000374358 CCDC183Q5T5S1 534 aa18.61■□□□□ 0.57
TMEM50A-201ENST00000374358 GIMAP6Q6P9H5 292 aa18.61■□□□□ 0.57
TMEM50A-201ENST00000374358 SNRPA1P09661 255 aaKnown RBP18.61■□□□□ 0.57
TMEM50A-201ENST00000374358 UBE2HP62256 183 aa18.61■□□□□ 0.57
TMEM50A-201ENST00000374358 DBNDD2Q9BQY9 259 aa18.61■□□□□ 0.57
TMEM50A-201ENST00000374358 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 A0A087WZG4 1122 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 TNNI3KQ59H18 835 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 SH2B1Q9NRF2 756 aaPredicted RBP18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 ZKSCAN5Q9Y2L8 839 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 FPGT-TNNI3KV9GXZ4 949 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 PHF14O94880 888 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 ATF3P18847 181 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 BLOC1S2Q6QNY1 142 aa18.6■□□□□ 0.57
TMEM50A-201ENST00000374358 TOB2Q14106 344 aaPredicted RBP18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 DDX46Q7L014 1031 aaKnown RBP18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 OFD1O75665 1012 aa18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 HS1BP3Q53T59 392 aa18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 LARP1BQ659C4 914 aaKnown RBP18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 ZSCAN31Q96LW9 406 aaPredicted RBP18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 ZNF830Q96NB3 372 aaPredicted RBP18.59■□□□□ 0.57
TMEM50A-201ENST00000374358 HIP1O00291 1037 aa18.58■□□□□ 0.57
TMEM50A-201ENST00000374358 TAF5LO75529 589 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms