RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 WASHC4Q2M389 1173 aa17.73■□□□□ 0.43
SRPK1-204ENST00000373825 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
SRPK1-204ENST00000373825 RAD50Q92878 1312 aa17.73■□□□□ 0.43
SRPK1-204ENST00000373825 EIF3CLB5ME19 914 aaKnown RBP17.72■□□□□ 0.43
SRPK1-204ENST00000373825 ANAPC15P60006 121 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 POTEDQ86YR6 584 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 NUP88Q99567 741 aaPredicted RBP17.72■□□□□ 0.43
SRPK1-204ENST00000373825 EIF3CQ99613 913 aaKnown RBP17.72■□□□□ 0.43
SRPK1-204ENST00000373825 DACH1Q9UI36 760 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 MLECQ14165 292 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 HLTFQ14527 1009 aaKnown RBP eCLIP17.72■□□□□ 0.434e-6■□□□□ 10.1
SRPK1-204ENST00000373825 SYCP1Q15431 976 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 MSL1Q68DK7 614 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 ANKRD7Q92527 254 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 SPTLC3Q9NUV7 552 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 RPSAP08865 295 aaKnown RBP17.72■□□□□ 0.43
SRPK1-204ENST00000373825 ZNF853P0CG23 659 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 MAGEA9P43362 315 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 FBXO18Q8NFZ0 1043 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 CYP2C19P33261 490 aa17.72■□□□□ 0.43
SRPK1-204ENST00000373825 ETF1P62495 437 aaKnown RBP17.72■□□□□ 0.43
SRPK1-204ENST00000373825 CTAGE9A4FU28 777 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 MAP2K1Q02750 393 aaPredicted RBP17.71■□□□□ 0.43
SRPK1-204ENST00000373825 FAN1Q9Y2M0 1017 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 CCDC175P0C221 793 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 AACSQ86V21 672 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 CNNM3Q8NE01 707 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 LRRC2Q9BYS8 371 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 ENOX2Q16206 610 aaKnown RBP17.71■□□□□ 0.43
SRPK1-204ENST00000373825 SPECC1Q5M775 1068 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 CXorf56Q9H5V9 222 aa17.71■□□□□ 0.43
SRPK1-204ENST00000373825 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 BCAS4Q8TDM0 211 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 ZMYM4Q5VZL5 1548 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 GOLGA6CA6NDK9 693 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 HSF2BPO75031 334 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 ECM2O94769 699 aaPredicted RBP17.7■□□□□ 0.42
SRPK1-204ENST00000373825 GOLGA6DP0CG33 693 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 GSPT1P15170 499 aaKnown RBP17.7■□□□□ 0.42
SRPK1-204ENST00000373825 ST5P78524 1137 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 BRF1Q92994 677 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 PAIP2Q9BPZ3 127 aaKnown RBP17.7■□□□□ 0.42
SRPK1-204ENST00000373825 GOLGA6AQ9NYA3 693 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 A0A087WWV3 80 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 MMS22LQ6ZRQ5 1243 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 GPR161Q8N6U8 529 aaKnown RBP17.7■□□□□ 0.42
SRPK1-204ENST00000373825 EPC1Q9H2F5 836 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 DCTPP1Q9H773 170 aa17.7■□□□□ 0.42
SRPK1-204ENST00000373825 SUFUQ9UMX1 484 aa17.69■□□□□ 0.42
SRPK1-204ENST00000373825 CEP85LQ5SZL2 805 aa17.69■□□□□ 0.42
SRPK1-204ENST00000373825 TTC19Q6DKK2 380 aaPredicted RBP17.69■□□□□ 0.42
SRPK1-204ENST00000373825 AIMP1Q12904 312 aaKnown RBP17.69■□□□□ 0.42
SRPK1-204ENST00000373825 N4BP2L2Q92802 583 aaPredicted RBP17.69■□□□□ 0.42
SRPK1-204ENST00000373825 DAPK1P53355 1430 aa17.69■□□□□ 0.42
SRPK1-204ENST00000373825 ATAD2Q6PL18 1390 aa17.69■□□□□ 0.42
SRPK1-204ENST00000373825 SUPT6HQ7KZ85 1726 aaKnown RBP17.69■□□□□ 0.42
SRPK1-204ENST00000373825 E2F5Q15329 346 aa17.69■□□□□ 0.42
SRPK1-204ENST00000373825 HIP1O00291 1037 aa17.68■□□□□ 0.42
SRPK1-204ENST00000373825 BAG1Q99933 345 aaPredicted RBP17.68■□□□□ 0.42
SRPK1-204ENST00000373825 MAGEC2Q9UBF1 373 aaPredicted RBP17.68■□□□□ 0.42
SRPK1-204ENST00000373825 ODF2LQ9ULJ1 636 aa17.68■□□□□ 0.42
SRPK1-204ENST00000373825 ZBTB7BO15156 539 aaPredicted RBP17.67■□□□□ 0.42
SRPK1-204ENST00000373825 EXOC4Q96A65 974 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 BICC1Q9H694 974 aaKnown RBP17.67■□□□□ 0.42
SRPK1-204ENST00000373825 LONRF2Q1L5Z9 754 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 EFCAB13Q8IY85 973 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 BOLA2Q9H3K6 86 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 FAM204AQ9H8W3 233 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 BAIAP2L1Q9UHR4 511 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 PALD1Q9ULE6 856 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 ANKRD44Q8N8A2 993 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 XPO4Q9C0E2 1151 aaKnown RBP17.67■□□□□ 0.42
SRPK1-204ENST00000373825 ELP1O95163 1332 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 NFE2L2Q16236 605 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 SRLQ86TD4 932 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 CLSTN2Q9H4D0 955 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 GUCA1BQ9UMX6 200 aa17.67■□□□□ 0.42
SRPK1-204ENST00000373825 A0A087WUV0 522 aaPredicted RBP17.66■□□□□ 0.42
SRPK1-204ENST00000373825 A0A1B0GVL5 298 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 EFCAB8A8MWE9 144 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 IFFO1Q0D2I5 559 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 PNMA8AQ86V59 439 aaPredicted RBP17.66■□□□□ 0.42
SRPK1-204ENST00000373825 TSPYL6Q8N831 410 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 B4GALNT4Q76KP1 1039 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 RAB11FIP4Q86YS3 637 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
SRPK1-204ENST00000373825 TESK2Q96S53 571 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 SAMM50Q9Y512 469 aa17.66■□□□□ 0.42
SRPK1-204ENST00000373825 GLRX3O76003 335 aaKnown RBP17.65■□□□□ 0.42
SRPK1-204ENST00000373825 PIP4K2BP78356 416 aa17.65■□□□□ 0.42
SRPK1-204ENST00000373825 C8orf76Q96K31 380 aa17.65■□□□□ 0.42
SRPK1-204ENST00000373825 USP27XA6NNY8 438 aa17.65■□□□□ 0.42
SRPK1-204ENST00000373825 CHMLP26374 656 aa17.65■□□□□ 0.42
SRPK1-204ENST00000373825 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
SRPK1-204ENST00000373825 SULT6B1Q6IMI4 303 aa17.65■□□□□ 0.42
SRPK1-204ENST00000373825 SPATS2LQ9NUQ6 558 aaKnown RBP17.65■□□□□ 0.42
SRPK1-204ENST00000373825 GEMIN8Q9NWZ8 242 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms