RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 SNED1Q8TER0 1413 aa21.18■□□□□ 0.98
HDAC8-202ENST00000373556 IARSP41252 1262 aaKnown RBP21.17■□□□□ 0.98
HDAC8-202ENST00000373556 C3orf67Q6ZVT6 689 aa21.17■□□□□ 0.98
HDAC8-202ENST00000373556 SLC51AQ86UW1 340 aa21.17■□□□□ 0.98
HDAC8-202ENST00000373556 L3MBTL3Q96JM7 780 aaPredicted RBP21.17■□□□□ 0.98
HDAC8-202ENST00000373556 BABAM1Q9NWV8 329 aa21.16■□□□□ 0.98
HDAC8-202ENST00000373556 IQCA1LA6NCM1 817 aa21.15■□□□□ 0.98
HDAC8-202ENST00000373556 TCERG1O14776 1098 aaKnown RBP21.15■□□□□ 0.98
HDAC8-202ENST00000373556 HOXA10P31260 410 aaPredicted RBP21.15■□□□□ 0.98
HDAC8-202ENST00000373556 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
HDAC8-202ENST00000373556 PPP1R42Q7Z4L9 355 aa21.15■□□□□ 0.98
HDAC8-202ENST00000373556 TAF1DQ9H5J8 278 aaPredicted RBP21.15■□□□□ 0.98
HDAC8-202ENST00000373556 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
HDAC8-202ENST00000373556 AIMP1Q12904 312 aaKnown RBP21.14■□□□□ 0.97
HDAC8-202ENST00000373556 PARP10Q53GL7 1025 aa21.14■□□□□ 0.97
HDAC8-202ENST00000373556 RBM17Q96I25 401 aaKnown RBP21.14■□□□□ 0.97
HDAC8-202ENST00000373556 PSMD1Q99460 953 aa21.14■□□□□ 0.97
HDAC8-202ENST00000373556 LAS1LQ9Y4W2 734 aaKnown RBP21.14■□□□□ 0.97
HDAC8-202ENST00000373556 COL4A5P29400 1685 aa21.14■□□□□ 0.97
HDAC8-202ENST00000373556 FZD9O00144 591 aa21.13■□□□□ 0.97
HDAC8-202ENST00000373556 WDR43Q15061 677 aaKnown RBP eCLIP21.13■□□□□ 0.97
HDAC8-202ENST00000373556 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
HDAC8-202ENST00000373556 PPEF1O14829 653 aaPredicted RBP21.12■□□□□ 0.97
HDAC8-202ENST00000373556 EAPPQ56P03 285 aaPredicted RBP21.12■□□□□ 0.97
HDAC8-202ENST00000373556 COPS6Q7L5N1 327 aa21.12■□□□□ 0.97
HDAC8-202ENST00000373556 XAGE3Q8WTP9 111 aa21.12■□□□□ 0.97
HDAC8-202ENST00000373556 RUNDC1Q96C34 613 aa21.12■□□□□ 0.97
HDAC8-202ENST00000373556 CRAMP1Q96RY5 1269 aa21.12■□□□□ 0.97
HDAC8-202ENST00000373556 UTP14AQ9BVJ6 771 aaKnown RBP21.12■□□□□ 0.97
HDAC8-202ENST00000373556 RNF123Q5XPI4 1314 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 LAMB2P55268 1798 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 CHL1O00533 1208 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 CC2D2BQ6DHV5 1058 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 LDHDQ86WU2 507 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 JDP2Q8WYK2 163 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 HACL1Q9UJ83 578 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 ADAMTS8Q9UP79 889 aa21.11■□□□□ 0.97
HDAC8-202ENST00000373556 NLRP3Q96P20 1036 aa21.1■□□□□ 0.97
HDAC8-202ENST00000373556 EPHX2P34913 555 aa21.09■□□□□ 0.97
HDAC8-202ENST00000373556 COL13A1Q5TAT6 717 aaPredicted RBP21.09■□□□□ 0.97
HDAC8-202ENST00000373556 CREBZFQ9NS37 354 aa21.09■□□□□ 0.97
HDAC8-202ENST00000373556 ADAMTSL1Q8N6G6 1762 aa21.09■□□□□ 0.97
HDAC8-202ENST00000373556 SLC10A5Q5PT55 438 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 GPC2Q8N158 579 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 ZNF428Q96B54 188 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
HDAC8-202ENST00000373556 CHPF2Q9P2E5 772 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 MKRN1Q9UHC7 482 aaKnown RBP21.08■□□□□ 0.97
HDAC8-202ENST00000373556 CLEC11AQ9Y240 323 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 GJA3Q9Y6H8 435 aa21.08■□□□□ 0.97
HDAC8-202ENST00000373556 ABCC4O15439 1325 aa21.07■□□□□ 0.96
HDAC8-202ENST00000373556 PASKQ96RG2 1323 aa21.07■□□□□ 0.96
HDAC8-202ENST00000373556 HCLS1P14317 486 aaPredicted RBP21.07■□□□□ 0.96
HDAC8-202ENST00000373556 HSP90AB3PQ58FF7 597 aa21.07■□□□□ 0.96
HDAC8-202ENST00000373556 LARGE2Q8N3Y3 721 aa21.07■□□□□ 0.96
HDAC8-202ENST00000373556 HSPA1AP0DMV8 641 aaKnown RBP21.06■□□□□ 0.96
HDAC8-202ENST00000373556 HSPA1BP0DMV9 641 aaKnown RBP21.06■□□□□ 0.96
HDAC8-202ENST00000373556 EIF6P56537 245 aaKnown RBP21.06■□□□□ 0.96
HDAC8-202ENST00000373556 LTBP1Q14766 1721 aa21.06■□□□□ 0.96
HDAC8-202ENST00000373556 ITGBL1O95965 494 aaPredicted RBP21.05■□□□□ 0.96
HDAC8-202ENST00000373556 TCIRG1Q13488 830 aa21.05■□□□□ 0.96
HDAC8-202ENST00000373556 GRIPAP1Q4V328 841 aa21.05■□□□□ 0.96
HDAC8-202ENST00000373556 HDGFL1Q5TGJ6 251 aa21.05■□□□□ 0.96
HDAC8-202ENST00000373556 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
HDAC8-202ENST00000373556 TAF1P21675 1872 aa21.05■□□□□ 0.96
HDAC8-202ENST00000373556 PNMA8AQ86V59 439 aaPredicted RBP21.04■□□□□ 0.96
HDAC8-202ENST00000373556 PRKRIP1Q9H875 184 aaPredicted RBP21.04■□□□□ 0.96
HDAC8-202ENST00000373556 ATP6V0A2Q9Y487 856 aa21.04■□□□□ 0.96
HDAC8-202ENST00000373556 PPIP5K2O43314 1243 aa21.03■□□□□ 0.96
HDAC8-202ENST00000373556 AOC3Q16853 763 aa21.03■□□□□ 0.96
HDAC8-202ENST00000373556 MAP1SQ66K74 1059 aaPredicted RBP21.03■□□□□ 0.96
HDAC8-202ENST00000373556 TMX4Q9H1E5 349 aaPredicted RBP21.03■□□□□ 0.96
HDAC8-202ENST00000373556 NIM1KQ8IY84 436 aa21.02■□□□□ 0.96
HDAC8-202ENST00000373556 SH3TC1Q8TE82 1336 aa21.02■□□□□ 0.95
HDAC8-202ENST00000373556 DDX60Q8IY21 1712 aaKnown RBP21.01■□□□□ 0.95
HDAC8-202ENST00000373556 LMOD1P29536 600 aaPredicted RBP21.01■□□□□ 0.95
HDAC8-202ENST00000373556 SCNN1DP51172 638 aa21.01■□□□□ 0.95
HDAC8-202ENST00000373556 CFAP44Q96MT7 982 aa21.01■□□□□ 0.95
HDAC8-202ENST00000373556 MBIPQ9NS73 344 aa21.01■□□□□ 0.95
HDAC8-202ENST00000373556 CNTNAP1P78357 1384 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 TMEM88BA6NKF7 163 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 HOXB7P09629 217 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 EPS15P42566 896 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 DUSP27Q5VZP5 1158 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 DDX46Q7L014 1031 aaKnown RBP21■□□□□ 0.95
HDAC8-202ENST00000373556 CNTROBQ8N137 903 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 PLBD2Q8NHP8 589 aa21■□□□□ 0.95
HDAC8-202ENST00000373556 DBF4Q9UBU7 674 aaPredicted RBP21■□□□□ 0.95
HDAC8-202ENST00000373556 BBOX1O75936 387 aa20.99■□□□□ 0.95
HDAC8-202ENST00000373556 DPP8Q6V1X1 898 aaPredicted RBP20.99■□□□□ 0.95
HDAC8-202ENST00000373556 ANKRD13DQ6ZTN6 518 aa20.99■□□□□ 0.95
HDAC8-202ENST00000373556 SP8Q8IXZ3 490 aa20.99■□□□□ 0.95
HDAC8-202ENST00000373556 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
HDAC8-202ENST00000373556 APAF1O14727 1248 aa20.98■□□□□ 0.95
HDAC8-202ENST00000373556 GRAPQ13588 217 aa20.98■□□□□ 0.95
HDAC8-202ENST00000373556 GRAPLQ8TC17 118 aaPredicted RBP20.98■□□□□ 0.95
HDAC8-202ENST00000373556 RTFDC1Q9BY42 306 aaPredicted RBP20.98■□□□□ 0.95
HDAC8-202ENST00000373556 TNS4Q8IZW8 715 aa20.97■□□□□ 0.95
HDAC8-202ENST00000373556 MPNDQ8N594 471 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms