RNA–Protein interactions for RNA: ENST00000372856.7

PABPC4-201, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC4, Length 3,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-201ENST00000372856 ST3GAL1Q11201 340 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 PROSER3Q2NL68 480 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 VPS53Q5VIR6 699 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 AACSQ86V21 672 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 LRRC59Q96AG4 307 aaKnown RBP18.84■□□□□ 0.61
PABPC4-201ENST00000372856 USP42Q9H9J4 1324 aaKnown RBP18.84■□□□□ 0.61
PABPC4-201ENST00000372856 ERICH4A6NGS2 130 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 ZSWIM6Q9HCJ5 1215 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 KDM4AO75164 1064 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 ZNF530Q6P9A1 599 aaPredicted RBP18.84■□□□□ 0.61
PABPC4-201ENST00000372856 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
PABPC4-201ENST00000372856 FAM227BQ96M60 508 aa18.84■□□□□ 0.61
PABPC4-201ENST00000372856 FERMT3Q86UX7 667 aa18.83■□□□□ 0.61
PABPC4-201ENST00000372856 PIBF1Q8WXW3 757 aa18.83■□□□□ 0.61
PABPC4-201ENST00000372856 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.83■□□□□ 0.61
PABPC4-201ENST00000372856 GTF2F1P35269 517 aaKnown RBP eCLIP18.83■□□□□ 0.6
PABPC4-201ENST00000372856 TCEANC2Q96MN5 208 aa18.83■□□□□ 0.6
PABPC4-201ENST00000372856 RBM8AQ9Y5S9 174 aaKnown RBP18.83■□□□□ 0.6
PABPC4-201ENST00000372856 HOXB7P09629 217 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 FAM173BQ6P4H8 233 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 IP6K1Q92551 441 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 GPATCH3Q96I76 525 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 PRAMEF22A3QJZ6 481 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 AP5Z1O43299 807 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 NECTIN1Q15223 517 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 FUCA2Q9BTY2 467 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 CCDC8Q9H0W5 538 aaPredicted RBP18.82■□□□□ 0.6
PABPC4-201ENST00000372856 DBF4Q9UBU7 674 aaPredicted RBP18.82■□□□□ 0.6
PABPC4-201ENST00000372856 TPCN1Q9ULQ1 816 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 CACNA1FO60840 1977 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 ZKSCAN1P17029 563 aaPredicted RBP18.82■□□□□ 0.6
PABPC4-201ENST00000372856 ZSCAN31Q96LW9 406 aaPredicted RBP18.82■□□□□ 0.6
PABPC4-201ENST00000372856 CCDC171Q6TFL3 1326 aa18.82■□□□□ 0.6
PABPC4-201ENST00000372856 RIOK3O14730 519 aaKnown RBP18.81■□□□□ 0.6
PABPC4-201ENST00000372856 MTX1Q13505 466 aa18.81■□□□□ 0.6
PABPC4-201ENST00000372856 SH2B1Q9NRF2 756 aaPredicted RBP18.81■□□□□ 0.6
PABPC4-201ENST00000372856 IRX3P78415 501 aaPredicted RBP18.81■□□□□ 0.6
PABPC4-201ENST00000372856 CREB3L3Q68CJ9 461 aa18.81■□□□□ 0.6
PABPC4-201ENST00000372856 EVI5LQ96CN4 794 aa18.81■□□□□ 0.6
PABPC4-201ENST00000372856 LARP1BQ659C4 914 aaKnown RBP18.8■□□□□ 0.6
PABPC4-201ENST00000372856 NMIQ13287 307 aaPredicted RBP18.8■□□□□ 0.6
PABPC4-201ENST00000372856 TM6SF1Q9BZW5 370 aa18.8■□□□□ 0.6
PABPC4-201ENST00000372856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-201ENST00000372856 SPC24Q8NBT2 197 aa18.79■□□□□ 0.6
PABPC4-201ENST00000372856 SIL1Q9H173 461 aa18.79■□□□□ 0.6
PABPC4-201ENST00000372856 AIMP1Q12904 312 aaKnown RBP18.79■□□□□ 0.6
PABPC4-201ENST00000372856 EAF2Q96CJ1 260 aaPredicted RBP18.79■□□□□ 0.6
PABPC4-201ENST00000372856 TRIM34Q9BYJ4 488 aa18.79■□□□□ 0.6
PABPC4-201ENST00000372856 PHF8Q9UPP1 1060 aa18.79■□□□□ 0.6
PABPC4-201ENST00000372856 CAMK4Q16566 473 aa18.79■□□□□ 0.6
PABPC4-201ENST00000372856 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
PABPC4-201ENST00000372856 N4BP2Q86UW6 1770 aaPredicted RBP18.78■□□□□ 0.6
PABPC4-201ENST00000372856 SASH1O94885 1247 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 KSR2Q6VAB6 950 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 CDC37L1Q7L3B6 337 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 TTC6Q86TZ1 520 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 SUCLG2Q96I99 432 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 BOLA2Q9H3K6 86 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 TAF6LQ9Y6J9 622 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
PABPC4-201ENST00000372856 AKAP4Q5JQC9 854 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 ERC1Q8IUD2 1116 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 KCNB2Q92953 911 aa18.78■□□□□ 0.6
PABPC4-201ENST00000372856 DNAJC2Q99543 621 aaKnown RBP18.77■□□□□ 0.6
PABPC4-201ENST00000372856 SLC27A2O14975 620 aa18.77■□□□□ 0.6
PABPC4-201ENST00000372856 ALDH1L1O75891 902 aa18.77■□□□□ 0.6
PABPC4-201ENST00000372856 THEMISQ8N1K5 641 aaPredicted RBP18.77■□□□□ 0.6
PABPC4-201ENST00000372856 BICC1Q9H694 974 aaKnown RBP18.77■□□□□ 0.6
PABPC4-201ENST00000372856 ANKARQ7Z5J8 1434 aa18.77■□□□□ 0.59
PABPC4-201ENST00000372856 A0A0D9SFI3 127 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 GIGYF1O75420 1035 aaPredicted RBP18.76■□□□□ 0.59
PABPC4-201ENST00000372856 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.594e-7■□□□□ 10.4
PABPC4-201ENST00000372856 PLEKHO1Q53GL0 409 aaPredicted RBP18.76■□□□□ 0.59
PABPC4-201ENST00000372856 MAP4K1Q92918 833 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
PABPC4-201ENST00000372856 LIG1P18858 919 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 KLHDC4Q8TBB5 520 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 KAZALD1Q96I82 304 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 TIGD1Q96MW7 591 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 OGFRQ9NZT2 677 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 RNMTO43148 476 aaKnown RBP18.76■□□□□ 0.59
PABPC4-201ENST00000372856 CCDC192P0DO97 292 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 KRT85P78386 507 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 STK3Q13188 491 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 SECISBP2LQ93073 1101 aaKnown RBP18.76■□□□□ 0.59
PABPC4-201ENST00000372856 FSD1Q9BTV5 496 aa18.76■□□□□ 0.59
PABPC4-201ENST00000372856 C1orf141Q5JVX7 400 aa18.75■□□□□ 0.59
PABPC4-201ENST00000372856 TFIP11Q9UBB9 837 aaKnown RBP18.75■□□□□ 0.59
PABPC4-201ENST00000372856 CCDC66A2RUB6 948 aa18.75■□□□□ 0.59
PABPC4-201ENST00000372856 GRM8O00222 908 aa18.75■□□□□ 0.59
PABPC4-201ENST00000372856 PYCARDQ9ULZ3 195 aa18.75■□□□□ 0.59
PABPC4-201ENST00000372856 SLFN14P0C7P3 912 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 BLOC1S2Q6QNY1 142 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 KCNF1Q9H3M0 494 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 CKAP2LQ8IYA6 745 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 MARF1Q9Y4F3 1742 aaKnown RBP18.74■□□□□ 0.59
PABPC4-201ENST00000372856 PSMA5P28066 241 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 PSME1Q06323 249 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 CHMP4CQ96CF2 233 aa18.74■□□□□ 0.59
PABPC4-201ENST00000372856 EDC3Q96F86 508 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms