RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 RHPN1Q8TCX5 695 aa32.48■■■□□ 2.79
ATPAF1-202ENST00000371937 ANKRD36CQ5JPF3 1778 aa32.47■■■□□ 2.79
ATPAF1-202ENST00000371937 NLRP10Q86W26 655 aa32.47■■■□□ 2.79
ATPAF1-202ENST00000371937 ZBTB38Q8NAP3 1195 aaPredicted RBP32.47■■■□□ 2.79
ATPAF1-202ENST00000371937 NUP98P52948 1817 aa32.47■■■□□ 2.79
ATPAF1-202ENST00000371937 KCNQ4P56696 695 aa32.47■■■□□ 2.79
ATPAF1-202ENST00000371937 RXRBP28702 533 aa32.46■■■□□ 2.79
ATPAF1-202ENST00000371937 FOXO4P98177 505 aa32.46■■■□□ 2.79
ATPAF1-202ENST00000371937 RTL5Q5HYW3 569 aaPredicted RBP32.46■■■□□ 2.79
ATPAF1-202ENST00000371937 CAMTA2O94983 1202 aa32.45■■■□□ 2.79
ATPAF1-202ENST00000371937 GPTP24298 496 aa32.45■■■□□ 2.79
ATPAF1-202ENST00000371937 ZNF34Q8IZ26 560 aa32.45■■■□□ 2.79
ATPAF1-202ENST00000371937 G3BP1Q13283 466 aaKnown RBP eCLIP32.44■■■□□ 2.78
ATPAF1-202ENST00000371937 OTUD7AQ8TE49 926 aaPredicted RBP32.44■■■□□ 2.78
ATPAF1-202ENST00000371937 LMBR1LQ6UX01 489 aa32.44■■■□□ 2.78
ATPAF1-202ENST00000371937 OSBPL3Q9H4L5 887 aa32.44■■■□□ 2.78
ATPAF1-202ENST00000371937 PA2G4Q9UQ80 394 aaKnown RBP32.44■■■□□ 2.78
ATPAF1-202ENST00000371937 COPRSQ9NQ92 184 aa32.43■■■□□ 2.78
ATPAF1-202ENST00000371937 ZNF652Q9Y2D9 606 aa32.42■■■□□ 2.78
ATPAF1-202ENST00000371937 CDHR2Q9BYE9 1310 aa32.42■■■□□ 2.78
ATPAF1-202ENST00000371937 RPS6KA4O75676 772 aa32.42■■■□□ 2.78
ATPAF1-202ENST00000371937 PLA2G12BQ9BX93 195 aa32.42■■■□□ 2.78
ATPAF1-202ENST00000371937 RGL2O15211 777 aa32.41■■■□□ 2.78
ATPAF1-202ENST00000371937 TTC22Q5TAA0 569 aa32.41■■■□□ 2.78
ATPAF1-202ENST00000371937 FAM89AQ96GI7 184 aa32.41■■■□□ 2.78
ATPAF1-202ENST00000371937 IL1RAPL2Q9NP60 686 aa32.41■■■□□ 2.78
ATPAF1-202ENST00000371937 PDE1AP54750 535 aa32.4■■■□□ 2.78
ATPAF1-202ENST00000371937 CLEC4GQ6UXB4 293 aa32.4■■■□□ 2.78
ATPAF1-202ENST00000371937 SALL3Q9BXA9 1300 aa32.4■■■□□ 2.78
ATPAF1-202ENST00000371937 TRIM37O94972 964 aa32.4■■■□□ 2.78
ATPAF1-202ENST00000371937 RFX5P48382 616 aaPredicted RBP32.4■■■□□ 2.78
ATPAF1-202ENST00000371937 MX1P20591 662 aa32.39■■■□□ 2.78
ATPAF1-202ENST00000371937 PARP10Q53GL7 1025 aa32.39■■■□□ 2.78
ATPAF1-202ENST00000371937 TRMT112Q9UI30 125 aaKnown RBP32.39■■■□□ 2.78
ATPAF1-202ENST00000371937 PTPN12Q05209 780 aaKnown RBP32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 CLASRPQ8N2M8 674 aaKnown RBP32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 CHMP3Q9Y3E7 222 aa32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 TAF1LQ8IZX4 1826 aa32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 UBN2Q6ZU65 1347 aa32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 GNPATO15228 680 aa32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 STAP2Q9UGK3 403 aa32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 RTCBQ9Y3I0 505 aaKnown RBP32.37■■■□□ 2.77
ATPAF1-202ENST00000371937 HMGB2P26583 209 aaKnown RBP32.36■■■□□ 2.77
ATPAF1-202ENST00000371937 SLC27A3Q5K4L6 730 aa32.36■■■□□ 2.77
ATPAF1-202ENST00000371937 GSPT1P15170 499 aaKnown RBP32.35■■■□□ 2.77
ATPAF1-202ENST00000371937 SIL1Q9H173 461 aa32.35■■■□□ 2.77
ATPAF1-202ENST00000371937 AOX1Q06278 1338 aa32.35■■■□□ 2.77
ATPAF1-202ENST00000371937 KLHDC4Q8TBB5 520 aa32.35■■■□□ 2.77
ATPAF1-202ENST00000371937 BCORQ6W2J9 1755 aa32.34■■■□□ 2.77
ATPAF1-202ENST00000371937 SASH1O94885 1247 aa32.33■■■□□ 2.77
ATPAF1-202ENST00000371937 NIP7Q9Y221 180 aaKnown RBP eCLIP32.33■■■□□ 2.77
ATPAF1-202ENST00000371937 C4BP0C0L5 1744 aa32.32■■■□□ 2.76
ATPAF1-202ENST00000371937 IRS4O14654 1257 aaPredicted RBP32.32■■■□□ 2.76
ATPAF1-202ENST00000371937 CSF1RP07333 972 aa32.32■■■□□ 2.76
ATPAF1-202ENST00000371937 AK7Q96M32 723 aa32.32■■■□□ 2.76
ATPAF1-202ENST00000371937 UTP14AQ9BVJ6 771 aaKnown RBP32.32■■■□□ 2.76
ATPAF1-202ENST00000371937 NARFQ9UHQ1 456 aa32.32■■■□□ 2.76
ATPAF1-202ENST00000371937 NUTM1Q86Y26 1132 aa32.31■■■□□ 2.76
ATPAF1-202ENST00000371937 LRRC4BQ9NT99 713 aa32.31■■■□□ 2.76
ATPAF1-202ENST00000371937 RGS17Q9UGC6 210 aaPredicted RBP32.31■■■□□ 2.76
ATPAF1-202ENST00000371937 CCDC57Q2TAC2 916 aa32.3■■■□□ 2.76
ATPAF1-202ENST00000371937 SUSD4Q5VX71 490 aa32.3■■■□□ 2.76
ATPAF1-202ENST00000371937 SH3TC1Q8TE82 1336 aa32.3■■■□□ 2.76
ATPAF1-202ENST00000371937 UPF2Q9HAU5 1272 aaKnown RBP32.3■■■□□ 2.76
ATPAF1-202ENST00000371937 PDE8AO60658 829 aa32.29■■■□□ 2.76
ATPAF1-202ENST00000371937 HSP90B1P14625 803 aaKnown RBP32.29■■■□□ 2.76
ATPAF1-202ENST00000371937 SYNE4Q8N205 404 aa32.29■■■□□ 2.76
ATPAF1-202ENST00000371937 ZPR1O75312 459 aa32.28■■■□□ 2.76
ATPAF1-202ENST00000371937 IFIT2P09913 472 aaKnown RBP32.28■■■□□ 2.76
ATPAF1-202ENST00000371937 CDC45O75419 566 aa32.28■■■□□ 2.76
ATPAF1-202ENST00000371937 SEC24BO95487 1268 aa32.28■■■□□ 2.76
ATPAF1-202ENST00000371937 ANP32AP39687 249 aaKnown RBP32.28■■■□□ 2.76
ATPAF1-202ENST00000371937 CTSWP56202 376 aa32.27■■■□□ 2.76
ATPAF1-202ENST00000371937 SCN7AQ01118 1682 aa32.27■■■□□ 2.76
ATPAF1-202ENST00000371937 EP400Q96L91 3159 aa32.27■■■□□ 2.76
ATPAF1-202ENST00000371937 SDSP20132 328 aa32.26■■■□□ 2.76
ATPAF1-202ENST00000371937 GPATCH3Q96I76 525 aa32.26■■■□□ 2.76
ATPAF1-202ENST00000371937 FBXO3Q9UK99 471 aa32.26■■■□□ 2.76
ATPAF1-202ENST00000371937 TTC41PQ6P2S7 1318 aa32.26■■■□□ 2.76
ATPAF1-202ENST00000371937 USP42Q9H9J4 1324 aaKnown RBP32.26■■■□□ 2.76
ATPAF1-202ENST00000371937 IFIT5Q13325 482 aaKnown RBP32.26■■■□□ 2.75
ATPAF1-202ENST00000371937 TRAPPC3LQ5T215 181 aa32.26■■■□□ 2.75
ATPAF1-202ENST00000371937 AACSQ86V21 672 aa32.26■■■□□ 2.75
ATPAF1-202ENST00000371937 TTLL11Q8NHH1 800 aa32.26■■■□□ 2.75
ATPAF1-202ENST00000371937 ADRA2BP18089 450 aa32.25■■■□□ 2.75
ATPAF1-202ENST00000371937 POTEAQ6S8J7 498 aa32.25■■■□□ 2.75
ATPAF1-202ENST00000371937 ARHGEF1Q92888 912 aaKnown RBP32.25■■■□□ 2.75
ATPAF1-202ENST00000371937 EIF5BO60841 1220 aaKnown RBP32.24■■■□□ 2.75
ATPAF1-202ENST00000371937 CIAO1O76071 339 aa32.24■■■□□ 2.75
ATPAF1-202ENST00000371937 IL15P40933 162 aaPredicted RBP32.24■■■□□ 2.75
ATPAF1-202ENST00000371937 USPL1Q5W0Q7 1092 aa32.24■■■□□ 2.75
ATPAF1-202ENST00000371937 TSHZ3Q63HK5 1081 aa32.24■■■□□ 2.75
ATPAF1-202ENST00000371937 PLSCR1O15162 318 aa32.23■■■□□ 2.75
ATPAF1-202ENST00000371937 NTSR2O95665 410 aa32.23■■■□□ 2.75
ATPAF1-202ENST00000371937 EYA2O00167 538 aa32.23■■■□□ 2.75
ATPAF1-202ENST00000371937 TBC1D9Q6ZT07 1266 aa32.23■■■□□ 2.75
ATPAF1-202ENST00000371937 MYH3P11055 1940 aa32.22■■■□□ 2.75
ATPAF1-202ENST00000371937 FAM177BA6PVY3 158 aa32.22■■■□□ 2.75
ATPAF1-202ENST00000371937 ERC2O15083 957 aa32.22■■■□□ 2.75
ATPAF1-202ENST00000371937 RFC4P35249 363 aa32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms