RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 KIF16BQ96L93 1317 aa20.25■□□□□ 0.83
PFDN4-201ENST00000371419 NUTM1Q86Y26 1132 aa20.24■□□□□ 0.83
PFDN4-201ENST00000371419 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
PFDN4-201ENST00000371419 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
PFDN4-201ENST00000371419 IGKV5-2P06315 115 aa20.24■□□□□ 0.83
PFDN4-201ENST00000371419 ERFEQ4G0M1 354 aa20.24■□□□□ 0.83
PFDN4-201ENST00000371419 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
PFDN4-201ENST00000371419 NOB1Q9ULX3 412 aaKnown RBP20.24■□□□□ 0.83
PFDN4-201ENST00000371419 BCAR3O75815 825 aa20.23■□□□□ 0.83
PFDN4-201ENST00000371419 PDE6BP35913 854 aa20.23■□□□□ 0.83
PFDN4-201ENST00000371419 LINS1Q8NG48 757 aa20.23■□□□□ 0.83
PFDN4-201ENST00000371419 NEURL1BA8MQ27 555 aa20.22■□□□□ 0.83
PFDN4-201ENST00000371419 SH3TC1Q8TE82 1336 aa20.21■□□□□ 0.83
PFDN4-201ENST00000371419 PXDNLA1KZ92 1463 aa20.21■□□□□ 0.83
PFDN4-201ENST00000371419 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
PFDN4-201ENST00000371419 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
PFDN4-201ENST00000371419 SLC4A10Q6U841 1118 aa20.21■□□□□ 0.83
PFDN4-201ENST00000371419 API5Q9BZZ5 524 aaKnown RBP20.21■□□□□ 0.83
PFDN4-201ENST00000371419 PDZRN3Q9UPQ7 1066 aa20.21■□□□□ 0.83
PFDN4-201ENST00000371419 ABCC12Q96J65 1359 aa20.21■□□□□ 0.83
PFDN4-201ENST00000371419 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
PFDN4-201ENST00000371419 A0A0G2JLW4 131 aa20.2■□□□□ 0.82
PFDN4-201ENST00000371419 IPO8O15397 1037 aaKnown RBP20.2■□□□□ 0.82
PFDN4-201ENST00000371419 DPEP1P16444 411 aa20.2■□□□□ 0.82
PFDN4-201ENST00000371419 ZBTB38Q8NAP3 1195 aaPredicted RBP20.2■□□□□ 0.82
PFDN4-201ENST00000371419 ARHGAP45Q92619 1136 aa20.2■□□□□ 0.82
PFDN4-201ENST00000371419 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
PFDN4-201ENST00000371419 RIC1Q4ADV7 1423 aa20.19■□□□□ 0.82
PFDN4-201ENST00000371419 H0YIN7 160 aa20.19■□□□□ 0.82
PFDN4-201ENST00000371419 CHRNA5P30532 468 aa20.19■□□□□ 0.82
PFDN4-201ENST00000371419 SLC10A5Q5PT55 438 aa20.19■□□□□ 0.82
PFDN4-201ENST00000371419 C2CD5Q86YS7 1000 aa20.19■□□□□ 0.82
PFDN4-201ENST00000371419 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
PFDN4-201ENST00000371419 NEFLP07196 543 aa20.18■□□□□ 0.82
PFDN4-201ENST00000371419 GCKRQ14397 625 aa20.18■□□□□ 0.82
PFDN4-201ENST00000371419 SYNE4Q8N205 404 aa20.18■□□□□ 0.82
PFDN4-201ENST00000371419 FRAT1Q92837 279 aaPredicted RBP20.18■□□□□ 0.82
PFDN4-201ENST00000371419 SRCIN1Q9C0H9 1055 aa20.18■□□□□ 0.82
PFDN4-201ENST00000371419 RCAN3Q9UKA8 241 aa20.18■□□□□ 0.82
PFDN4-201ENST00000371419 KIAA1551Q9HCM1 1747 aa20.18■□□□□ 0.82
PFDN4-201ENST00000371419 KLRG2A4D1S0 409 aaPredicted RBP20.18■□□□□ 0.82
PFDN4-201ENST00000371419 RTL5Q5HYW3 569 aaPredicted RBP20.18■□□□□ 0.82
PFDN4-201ENST00000371419 N4BP2Q86UW6 1770 aaPredicted RBP20.17■□□□□ 0.82
PFDN4-201ENST00000371419 ALDH1L1O75891 902 aa20.17■□□□□ 0.82
PFDN4-201ENST00000371419 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
PFDN4-201ENST00000371419 KCNA3P22001 575 aa20.17■□□□□ 0.82
PFDN4-201ENST00000371419 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
PFDN4-201ENST00000371419 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
PFDN4-201ENST00000371419 ATF7IPQ6VMQ6 1270 aa20.16■□□□□ 0.82
PFDN4-201ENST00000371419 IRS4O14654 1257 aaPredicted RBP20.15■□□□□ 0.82
PFDN4-201ENST00000371419 SRGNP10124 158 aa20.15■□□□□ 0.82
PFDN4-201ENST00000371419 ZKSCAN2Q63HK3 967 aa20.15■□□□□ 0.82
PFDN4-201ENST00000371419 JARID2Q92833 1246 aaPredicted RBP20.15■□□□□ 0.82
PFDN4-201ENST00000371419 PIM2Q9P1W9 311 aa20.15■□□□□ 0.82
PFDN4-201ENST00000371419 TNRC6CQ9HCJ0 1690 aaKnown RBP20.15■□□□□ 0.82
PFDN4-201ENST00000371419 H7C1W4 665 aa20.14■□□□□ 0.81
PFDN4-201ENST00000371419 TRIM27P14373 513 aa20.14■□□□□ 0.81
PFDN4-201ENST00000371419 CRY2Q49AN0 593 aa20.14■□□□□ 0.81
PFDN4-201ENST00000371419 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
PFDN4-201ENST00000371419 MASTLQ96GX5 879 aa20.14■□□□□ 0.81
PFDN4-201ENST00000371419 CDHR2Q9BYE9 1310 aa20.14■□□□□ 0.81
PFDN4-201ENST00000371419 NPR1P16066 1061 aa20.13■□□□□ 0.81
PFDN4-201ENST00000371419 CCT4P50991 539 aaKnown RBP20.13■□□□□ 0.81
PFDN4-201ENST00000371419 STYK1Q6J9G0 422 aa20.13■□□□□ 0.81
PFDN4-201ENST00000371419 C3orf67Q6ZVT6 689 aa20.13■□□□□ 0.81
PFDN4-201ENST00000371419 ZNF622Q969S3 477 aaKnown RBP eCLIP20.13■□□□□ 0.811e-12■□□□□ 11.2
PFDN4-201ENST00000371419 GOLGB1Q14789 3259 aaKnown RBP20.13■□□□□ 0.81
PFDN4-201ENST00000371419 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
PFDN4-201ENST00000371419 DLEC1Q9Y238 1755 aa20.12■□□□□ 0.81
PFDN4-201ENST00000371419 GRM8O00222 908 aa20.12■□□□□ 0.81
PFDN4-201ENST00000371419 C9orf78Q9NZ63 289 aaPredicted RBP20.12■□□□□ 0.81
PFDN4-201ENST00000371419 WWC3Q9ULE0 1092 aa20.12■□□□□ 0.81
PFDN4-201ENST00000371419 SUPT16HQ9Y5B9 1047 aaKnown RBP20.12■□□□□ 0.81
PFDN4-201ENST00000371419 ABCC4O15439 1325 aa20.12■□□□□ 0.81
PFDN4-201ENST00000371419 DALRD3Q5D0E6 543 aaKnown RBP20.11■□□□□ 0.81
PFDN4-201ENST00000371419 PELP1Q8IZL8 1130 aaKnown RBP20.11■□□□□ 0.81
PFDN4-201ENST00000371419 RPGRQ92834 1020 aaKnown RBP20.11■□□□□ 0.81
PFDN4-201ENST00000371419 DDX60Q8IY21 1712 aaKnown RBP20.11■□□□□ 0.81
PFDN4-201ENST00000371419 DCAF8L1A6NGE4 600 aa20.11■□□□□ 0.81
PFDN4-201ENST00000371419 PDE8AO60658 829 aa20.11■□□□□ 0.81
PFDN4-201ENST00000371419 CASP7P55210 303 aa20.11■□□□□ 0.81
PFDN4-201ENST00000371419 GPR162Q16538 588 aa20.11■□□□□ 0.81
PFDN4-201ENST00000371419 TTLL6Q8N841 843 aa20.11■□□□□ 0.81
PFDN4-201ENST00000371419 CNKSR1Q969H4 720 aa20.11■□□□□ 0.81
PFDN4-201ENST00000371419 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
PFDN4-201ENST00000371419 LAMB2P55268 1798 aa20.1■□□□□ 0.81
PFDN4-201ENST00000371419 HOXA10P31260 410 aaPredicted RBP20.1■□□□□ 0.81
PFDN4-201ENST00000371419 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
PFDN4-201ENST00000371419 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
PFDN4-201ENST00000371419 TNNQ9UQP3 1299 aa20.1■□□□□ 0.81
PFDN4-201ENST00000371419 BCS1LQ9Y276 419 aa20.1■□□□□ 0.81
PFDN4-201ENST00000371419 ALDH1B1P30837 517 aa20.09■□□□□ 0.81
PFDN4-201ENST00000371419 INTS3Q68E01 1043 aaKnown RBP20.09■□□□□ 0.81
PFDN4-201ENST00000371419 RBM17Q96I25 401 aaKnown RBP20.09■□□□□ 0.81
PFDN4-201ENST00000371419 FTSJ3Q8IY81 847 aaKnown RBP20.08■□□□□ 0.81
PFDN4-201ENST00000371419 PLA2G12BQ9BX93 195 aa20.08■□□□□ 0.81
PFDN4-201ENST00000371419 UTYO14607 1347 aa20.08■□□□□ 0.8
PFDN4-201ENST00000371419 YBX3P16989 372 aaKnown RBP eCLIP20.07■□□□□ 0.8
PFDN4-201ENST00000371419 DDX46Q7L014 1031 aaKnown RBP20.07■□□□□ 0.8
PFDN4-201ENST00000371419 DZIP1LQ8IYY4 767 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms