RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 VEGFAP15692 232 aaPredicted RBP22.24■■□□□ 1.15
LRRC42-202ENST00000371368 HOXA10P31260 410 aaPredicted RBP22.24■■□□□ 1.15
LRRC42-202ENST00000371368 CALD1Q05682 793 aaKnown RBP22.24■■□□□ 1.15
LRRC42-202ENST00000371368 HSP90AB3PQ58FF7 597 aa22.24■■□□□ 1.15
LRRC42-202ENST00000371368 DUSP27Q5VZP5 1158 aa22.24■■□□□ 1.15
LRRC42-202ENST00000371368 RPGRQ92834 1020 aaKnown RBP22.24■■□□□ 1.15
LRRC42-202ENST00000371368 UTP14AQ9BVJ6 771 aaKnown RBP22.24■■□□□ 1.15
LRRC42-202ENST00000371368 DICER1Q9UPY3 1922 aaKnown RBP22.23■■□□□ 1.15
LRRC42-202ENST00000371368 GNAI1P63096 354 aa22.23■■□□□ 1.15
LRRC42-202ENST00000371368 SLC10A5Q5PT55 438 aa22.23■■□□□ 1.15
LRRC42-202ENST00000371368 RTKN2Q8IZC4 609 aa22.23■■□□□ 1.15
LRRC42-202ENST00000371368 IFT57Q9NWB7 429 aa22.23■■□□□ 1.15
LRRC42-202ENST00000371368 FKBP4Q02790 459 aaKnown RBP eCLIP22.22■■□□□ 1.15
LRRC42-202ENST00000371368 FSTL1Q12841 308 aa22.22■■□□□ 1.15
LRRC42-202ENST00000371368 TCIRG1Q13488 830 aa22.22■■□□□ 1.15
LRRC42-202ENST00000371368 DBF4Q9UBU7 674 aaPredicted RBP22.22■■□□□ 1.15
LRRC42-202ENST00000371368 APLP1P51693 650 aa22.21■■□□□ 1.15
LRRC42-202ENST00000371368 C3orf67Q6ZVT6 689 aa22.21■■□□□ 1.15
LRRC42-202ENST00000371368 NLRP10Q86W26 655 aa22.21■■□□□ 1.15
LRRC42-202ENST00000371368 RBM17Q96I25 401 aaKnown RBP22.21■■□□□ 1.15
LRRC42-202ENST00000371368 NLRP3Q96P20 1036 aa22.21■■□□□ 1.15
LRRC42-202ENST00000371368 CRAMP1Q96RY5 1269 aa22.21■■□□□ 1.15
LRRC42-202ENST00000371368 POTECB2RU33 542 aa22.2■■□□□ 1.14
LRRC42-202ENST00000371368 ZNF277Q9NRM2 450 aaPredicted RBP22.2■■□□□ 1.14
LRRC42-202ENST00000371368 ANKRD13DQ6ZTN6 518 aa22.19■■□□□ 1.14
LRRC42-202ENST00000371368 SYNE4Q8N205 404 aa22.19■■□□□ 1.14
LRRC42-202ENST00000371368 PLBD2Q8NHP8 589 aa22.19■■□□□ 1.14
LRRC42-202ENST00000371368 HYPKQ9NX55 129 aa22.19■■□□□ 1.14
LRRC42-202ENST00000371368 RNF123Q5XPI4 1314 aa22.18■■□□□ 1.14
LRRC42-202ENST00000371368 CC2D2BQ6DHV5 1058 aa22.18■■□□□ 1.14
LRRC42-202ENST00000371368 ANKRD36CQ5JPF3 1778 aa22.17■■□□□ 1.14
LRRC42-202ENST00000371368 ELL2O00472 640 aaPredicted RBP22.17■■□□□ 1.14
LRRC42-202ENST00000371368 DDNO94850 711 aaPredicted RBP22.17■■□□□ 1.14
LRRC42-202ENST00000371368 SMC1BQ8NDV3 1235 aa22.17■■□□□ 1.14
LRRC42-202ENST00000371368 TRMT112Q9UI30 125 aaKnown RBP22.17■■□□□ 1.14
LRRC42-202ENST00000371368 WDR90Q96KV7 1748 aa22.17■■□□□ 1.14
LRRC42-202ENST00000371368 ANP32CO43423 234 aa22.16■■□□□ 1.14
LRRC42-202ENST00000371368 IARSP41252 1262 aaKnown RBP22.16■■□□□ 1.14
LRRC42-202ENST00000371368 TCERG1O14776 1098 aaKnown RBP22.15■■□□□ 1.14
LRRC42-202ENST00000371368 HCLS1P14317 486 aaPredicted RBP22.15■■□□□ 1.14
LRRC42-202ENST00000371368 C8orf58Q8NAV2 365 aa22.15■■□□□ 1.14
LRRC42-202ENST00000371368 PSMD1Q99460 953 aa22.15■■□□□ 1.14
LRRC42-202ENST00000371368 SNED1Q8TER0 1413 aa22.14■■□□□ 1.14
LRRC42-202ENST00000371368 PPEF1O14829 653 aaPredicted RBP22.14■■□□□ 1.13
LRRC42-202ENST00000371368 GRIPAP1Q4V328 841 aa22.14■■□□□ 1.13
LRRC42-202ENST00000371368 ISCA1Q9BUE6 129 aa22.14■■□□□ 1.13
LRRC42-202ENST00000371368 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
LRRC42-202ENST00000371368 SH3TC1Q8TE82 1336 aa22.13■■□□□ 1.13
LRRC42-202ENST00000371368 CCDC27Q2M243 656 aa22.13■■□□□ 1.13
LRRC42-202ENST00000371368 ZNF428Q96B54 188 aa22.13■■□□□ 1.13
LRRC42-202ENST00000371368 SLC51AQ86UW1 340 aa22.12■■□□□ 1.13
LRRC42-202ENST00000371368 DNAJC5GQ8N7S2 189 aa22.12■■□□□ 1.13
LRRC42-202ENST00000371368 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
LRRC42-202ENST00000371368 CEP350Q5VT06 3117 aa22.12■■□□□ 1.13
LRRC42-202ENST00000371368 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
LRRC42-202ENST00000371368 RIC3Q7Z5B4 369 aa22.11■■□□□ 1.13
LRRC42-202ENST00000371368 ATP6V0A2Q9Y487 856 aa22.11■■□□□ 1.13
LRRC42-202ENST00000371368 ABCC4O15439 1325 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 ZNF541Q9H0D2 1346 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 FZD9O00144 591 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 BBOX1O75936 387 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 TRIM28Q13263 835 aaKnown RBP22.1■■□□□ 1.13
LRRC42-202ENST00000371368 WWC1Q8IX03 1113 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 JDP2Q8WYK2 163 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 CHMP4AQ9BY43 222 aa22.1■■□□□ 1.13
LRRC42-202ENST00000371368 TMX4Q9H1E5 349 aaPredicted RBP22.1■■□□□ 1.13
LRRC42-202ENST00000371368 GOLGA2Q08379 1002 aa22.09■■□□□ 1.13
LRRC42-202ENST00000371368 DDX46Q7L014 1031 aaKnown RBP22.09■■□□□ 1.13
LRRC42-202ENST00000371368 FAM89AQ96GI7 184 aa22.09■■□□□ 1.13
LRRC42-202ENST00000371368 L3MBTL3Q96JM7 780 aaPredicted RBP22.09■■□□□ 1.13
LRRC42-202ENST00000371368 LAMB2P55268 1798 aa22.08■■□□□ 1.13
LRRC42-202ENST00000371368 HTRA3P83110 453 aa22.08■■□□□ 1.13
LRRC42-202ENST00000371368 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.13
LRRC42-202ENST00000371368 CCDC30Q5VVM6 783 aa22.08■■□□□ 1.13
LRRC42-202ENST00000371368 SP8Q8IXZ3 490 aa22.08■■□□□ 1.13
LRRC42-202ENST00000371368 TSPYL6Q8N831 410 aa22.08■■□□□ 1.13
LRRC42-202ENST00000371368 TSR2Q969E8 191 aaKnown RBP22.08■■□□□ 1.13
LRRC42-202ENST00000371368 IQCA1LA6NCM1 817 aa22.07■■□□□ 1.12
LRRC42-202ENST00000371368 GRAPQ13588 217 aa22.06■■□□□ 1.12
LRRC42-202ENST00000371368 LARGE2Q8N3Y3 721 aa22.06■■□□□ 1.12
LRRC42-202ENST00000371368 GRAPLQ8TC17 118 aaPredicted RBP22.06■■□□□ 1.12
LRRC42-202ENST00000371368 POTEIP0CG38 1075 aa22.05■■□□□ 1.12
LRRC42-202ENST00000371368 POTEJP0CG39 1038 aa22.05■■□□□ 1.12
LRRC42-202ENST00000371368 EIF6P56537 245 aaKnown RBP22.05■■□□□ 1.12
LRRC42-202ENST00000371368 RTL5Q5HYW3 569 aaPredicted RBP22.05■■□□□ 1.12
LRRC42-202ENST00000371368 CHADLQ6NUI6 762 aa22.05■■□□□ 1.12
LRRC42-202ENST00000371368 TAF1DQ9H5J8 278 aaPredicted RBP22.05■■□□□ 1.12
LRRC42-202ENST00000371368 IL16Q14005 1332 aa22.05■■□□□ 1.12
LRRC42-202ENST00000371368 SF3B3Q15393 1217 aaKnown RBP22.04■■□□□ 1.12
LRRC42-202ENST00000371368 GPC2Q8N158 579 aa22.04■■□□□ 1.12
LRRC42-202ENST00000371368 MYD88Q99836 296 aa22.04■■□□□ 1.12
LRRC42-202ENST00000371368 VPS33BQ9H267 617 aa22.04■■□□□ 1.12
LRRC42-202ENST00000371368 HACL1Q9UJ83 578 aa22.04■■□□□ 1.12
LRRC42-202ENST00000371368 COL4A5P29400 1685 aa22.04■■□□□ 1.12
LRRC42-202ENST00000371368 SCN4AP35499 1836 aa22.03■■□□□ 1.12
LRRC42-202ENST00000371368 DDX58O95786 925 aaKnown RBP22.03■■□□□ 1.12
LRRC42-202ENST00000371368 MPNDQ8N594 471 aa22.03■■□□□ 1.12
LRRC42-202ENST00000371368 SUPT20HQ8NEM7 779 aa22.03■■□□□ 1.12
LRRC42-202ENST00000371368 RTFDC1Q9BY42 306 aaPredicted RBP22.03■■□□□ 1.12
LRRC42-202ENST00000371368 SALL2Q9Y467 1007 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms