RNA–Protein interactions for RNA: ENST00000370664.3

UBTD1-201, Transcript of ubiquitin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBTD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTD1-201ENST00000370664 ZNF831Q5JPB2 1677 aa28.94■■■□□ 2.22
UBTD1-201ENST00000370664 RREB1Q92766 1687 aa28.94■■■□□ 2.22
UBTD1-201ENST00000370664 HLFQ16534 295 aa28.93■■■□□ 2.22
UBTD1-201ENST00000370664 CLASRPQ8N2M8 674 aaKnown RBP28.93■■■□□ 2.22
UBTD1-201ENST00000370664 COPRSQ9NQ92 184 aa28.93■■■□□ 2.22
UBTD1-201ENST00000370664 EIF5BO60841 1220 aaKnown RBP28.92■■■□□ 2.22
UBTD1-201ENST00000370664 RFX5P48382 616 aaPredicted RBP28.92■■■□□ 2.22
UBTD1-201ENST00000370664 RTL5Q5HYW3 569 aaPredicted RBP28.92■■■□□ 2.22
UBTD1-201ENST00000370664 TSHZ3Q63HK5 1081 aa28.92■■■□□ 2.22
UBTD1-201ENST00000370664 LMBR1LQ6UX01 489 aa28.92■■■□□ 2.22
UBTD1-201ENST00000370664 C22orf23Q9BZE7 217 aa28.91■■■□□ 2.22
UBTD1-201ENST00000370664 NHSQ6T4R5 1651 aa28.9■■■□□ 2.22
UBTD1-201ENST00000370664 SASH1O94885 1247 aa28.9■■■□□ 2.22
UBTD1-201ENST00000370664 PCCAP05165 728 aaPredicted RBP28.9■■■□□ 2.22
UBTD1-201ENST00000370664 SIL1Q9H173 461 aa28.9■■■□□ 2.22
UBTD1-201ENST00000370664 QTRT2Q9H974 415 aaKnown RBP28.9■■■□□ 2.22
UBTD1-201ENST00000370664 TBC1D2BQ9UPU7 963 aa28.9■■■□□ 2.22
UBTD1-201ENST00000370664 PTPN12Q05209 780 aaKnown RBP28.89■■■□□ 2.22
UBTD1-201ENST00000370664 CASC1Q6TDU7 716 aa28.89■■■□□ 2.22
UBTD1-201ENST00000370664 KLHDC4Q8TBB5 520 aa28.89■■■□□ 2.22
UBTD1-201ENST00000370664 SEPT12Q8IYM1 358 aa28.89■■■□□ 2.21
UBTD1-201ENST00000370664 ANKRD36CQ5JPF3 1778 aa28.88■■■□□ 2.21
UBTD1-201ENST00000370664 NLRP10Q86W26 655 aa28.88■■■□□ 2.21
UBTD1-201ENST00000370664 ZBTB38Q8NAP3 1195 aaPredicted RBP28.88■■■□□ 2.21
UBTD1-201ENST00000370664 USP42Q9H9J4 1324 aaKnown RBP28.88■■■□□ 2.21
UBTD1-201ENST00000370664 COL5A3P25940 1745 aaPredicted RBP28.87■■■□□ 2.21
UBTD1-201ENST00000370664 PTF1AQ7RTS3 328 aa28.87■■■□□ 2.21
UBTD1-201ENST00000370664 CHMP3Q9Y3E7 222 aa28.87■■■□□ 2.21
UBTD1-201ENST00000370664 TUBGCP6Q96RT7 1819 aa28.87■■■□□ 2.21
UBTD1-201ENST00000370664 GPTP24298 496 aa28.86■■■□□ 2.21
UBTD1-201ENST00000370664 FAM182BQ5T319 152 aa28.86■■■□□ 2.21
UBTD1-201ENST00000370664 IFIT2P09913 472 aaKnown RBP28.86■■■□□ 2.21
UBTD1-201ENST00000370664 BTAF1O14981 1849 aa28.86■■■□□ 2.21
UBTD1-201ENST00000370664 NUP98P52948 1817 aa28.86■■■□□ 2.21
UBTD1-201ENST00000370664 TTC41PQ6P2S7 1318 aa28.86■■■□□ 2.21
UBTD1-201ENST00000370664 PI4K2BQ8TCG2 481 aa28.85■■■□□ 2.21
UBTD1-201ENST00000370664 PLA2G12BQ9BX93 195 aa28.85■■■□□ 2.21
UBTD1-201ENST00000370664 MYH14Q7Z406 1995 aaKnown RBP28.84■■■□□ 2.21
UBTD1-201ENST00000370664 AACSQ86V21 672 aa28.84■■■□□ 2.21
UBTD1-201ENST00000370664 FAM89AQ96GI7 184 aa28.84■■■□□ 2.21
UBTD1-201ENST00000370664 GPATCH3Q96I76 525 aa28.84■■■□□ 2.21
UBTD1-201ENST00000370664 CDHR2Q9BYE9 1310 aa28.83■■■□□ 2.21
UBTD1-201ENST00000370664 TRIM6-TRIM34B2RNG4 842 aa28.83■■■□□ 2.21
UBTD1-201ENST00000370664 LINC00116Q8NCU8 138 aa28.83■■■□□ 2.21
UBTD1-201ENST00000370664 ZNF34Q8IZ26 560 aa28.83■■■□□ 2.21
UBTD1-201ENST00000370664 ERC2O15083 957 aa28.81■■■□□ 2.2
UBTD1-201ENST00000370664 RBM25P49756 843 aaKnown RBP28.81■■■□□ 2.2
UBTD1-201ENST00000370664 RILPL2Q969X0 211 aa28.81■■■□□ 2.2
UBTD1-201ENST00000370664 ECHDC1Q9NTX5 307 aa28.81■■■□□ 2.2
UBTD1-201ENST00000370664 GLRX3O76003 335 aaKnown RBP28.8■■■□□ 2.2
UBTD1-201ENST00000370664 CAMTA2O94983 1202 aa28.8■■■□□ 2.2
UBTD1-201ENST00000370664 EAF2Q96CJ1 260 aaPredicted RBP28.8■■■□□ 2.2
UBTD1-201ENST00000370664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.8■■■□□ 2.2
UBTD1-201ENST00000370664 CNTNAP4Q9C0A0 1308 aa28.8■■■□□ 2.2
UBTD1-201ENST00000370664 ERICH6Q7L0X2 663 aa28.79■■■□□ 2.2
UBTD1-201ENST00000370664 TRMT112Q9UI30 125 aaKnown RBP28.79■■■□□ 2.2
UBTD1-201ENST00000370664 DAXXQ9UER7 740 aaPredicted RBP28.78■■■□□ 2.2
UBTD1-201ENST00000370664 SBF2Q86WG5 1849 aa28.78■■■□□ 2.2
UBTD1-201ENST00000370664 UBN2Q6ZU65 1347 aa28.78■■■□□ 2.2
UBTD1-201ENST00000370664 CSF1RP07333 972 aa28.77■■■□□ 2.2
UBTD1-201ENST00000370664 KCNQ4P56696 695 aa28.77■■■□□ 2.2
UBTD1-201ENST00000370664 TFCP2Q12800 502 aa28.77■■■□□ 2.2
UBTD1-201ENST00000370664 RC3H1Q5TC82 1133 aaKnown RBP28.77■■■□□ 2.2
UBTD1-201ENST00000370664 CCDC8Q9H0W5 538 aaPredicted RBP28.77■■■□□ 2.2
UBTD1-201ENST00000370664 CCDC57Q2TAC2 916 aa28.76■■■□□ 2.19
UBTD1-201ENST00000370664 SYNE4Q8N205 404 aa28.75■■■□□ 2.19
UBTD1-201ENST00000370664 IRS4O14654 1257 aaPredicted RBP28.74■■■□□ 2.19
UBTD1-201ENST00000370664 TNNI3KQ59H18 835 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 CNTROBQ8N137 903 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 CCNL1Q9UK58 526 aaPredicted RBP28.74■■■□□ 2.19
UBTD1-201ENST00000370664 FPGT-TNNI3KV9GXZ4 949 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 CIAO1O76071 339 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 CHMLP26374 656 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 IL15P40933 162 aaPredicted RBP28.74■■■□□ 2.19
UBTD1-201ENST00000370664 PARP10Q53GL7 1025 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 ATG9AQ7Z3C6 839 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 ZNF652Q9Y2D9 606 aa28.74■■■□□ 2.19
UBTD1-201ENST00000370664 EYA2O00167 538 aa28.73■■■□□ 2.19
UBTD1-201ENST00000370664 REC8O95072 547 aa28.73■■■□□ 2.19
UBTD1-201ENST00000370664 BECN1Q14457 450 aa28.73■■■□□ 2.19
UBTD1-201ENST00000370664 BCL11BQ9C0K0 894 aaPredicted RBP28.73■■■□□ 2.19
UBTD1-201ENST00000370664 MAP4K4O95819 1239 aaPredicted RBP28.72■■■□□ 2.19
UBTD1-201ENST00000370664 ZNF594Q96JF6 807 aaPredicted RBP28.72■■■□□ 2.19
UBTD1-201ENST00000370664 TLR7Q9NYK1 1049 aaKnown RBP28.72■■■□□ 2.19
UBTD1-201ENST00000370664 FBXO3Q9UK99 471 aa28.72■■■□□ 2.19
UBTD1-201ENST00000370664 PDE8AO60658 829 aa28.72■■■□□ 2.19
UBTD1-201ENST00000370664 CTSWP56202 376 aa28.72■■■□□ 2.19
UBTD1-201ENST00000370664 LY75O60449 1722 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 IFIT5Q13325 482 aaKnown RBP28.71■■■□□ 2.19
UBTD1-201ENST00000370664 SUSD4Q5VX71 490 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 CLEC4GQ6UXB4 293 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 TTLL11Q8NHH1 800 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 AK7Q96M32 723 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 ESYT1Q9BSJ8 1104 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 USP26Q9BXU7 913 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 BCORQ6W2J9 1755 aa28.71■■■□□ 2.19
UBTD1-201ENST00000370664 UTP14AQ9BVJ6 771 aaKnown RBP28.7■■■□□ 2.19
UBTD1-201ENST00000370664 GPR108Q9NPR9 543 aa28.7■■■□□ 2.19
UBTD1-201ENST00000370664 RPS6KA4O75676 772 aa28.69■■■□□ 2.18
UBTD1-201ENST00000370664 SLC4A3P48751 1232 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms