RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 PSMD1Q99460 953 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 WBP1LQ9NX94 342 aa19.97■□□□□ 0.79
RPF1-202ENST00000370656 FAM161AQ3B820 660 aa19.96■□□□□ 0.79
RPF1-202ENST00000370656 NUP98P52948 1817 aa19.96■□□□□ 0.79
RPF1-202ENST00000370656 RASSF10A6NK89 507 aa19.95■□□□□ 0.78
RPF1-202ENST00000370656 LMOD1P29536 600 aaPredicted RBP19.95■□□□□ 0.78
RPF1-202ENST00000370656 EIF6P56537 245 aaKnown RBP19.95■□□□□ 0.78
RPF1-202ENST00000370656 TAF7Q15545 349 aaPredicted RBP19.95■□□□□ 0.78
RPF1-202ENST00000370656 GRIPAP1Q4V328 841 aa19.95■□□□□ 0.78
RPF1-202ENST00000370656 MAP1SQ66K74 1059 aaPredicted RBP19.95■□□□□ 0.78
RPF1-202ENST00000370656 ANP32CO43423 234 aa19.94■□□□□ 0.78
RPF1-202ENST00000370656 MAP2K1Q02750 393 aaPredicted RBP19.94■□□□□ 0.78
RPF1-202ENST00000370656 HLFQ16534 295 aa19.94■□□□□ 0.78
RPF1-202ENST00000370656 RPGRQ92834 1020 aaKnown RBP19.94■□□□□ 0.78
RPF1-202ENST00000370656 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
RPF1-202ENST00000370656 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
RPF1-202ENST00000370656 NEFMP07197 916 aa19.93■□□□□ 0.78
RPF1-202ENST00000370656 DCTN1Q14203 1278 aa19.93■□□□□ 0.78
RPF1-202ENST00000370656 ABHD8Q96I13 439 aa19.93■□□□□ 0.78
RPF1-202ENST00000370656 GJA3Q9Y6H8 435 aa19.93■□□□□ 0.78
RPF1-202ENST00000370656 ERVV-1B6SEH8 477 aa19.92■□□□□ 0.78
RPF1-202ENST00000370656 CRY2Q49AN0 593 aa19.92■□□□□ 0.78
RPF1-202ENST00000370656 WDR33Q9C0J8 1336 aaKnown RBP19.92■□□□□ 0.78
RPF1-202ENST00000370656 NPM3O75607 178 aaKnown RBP19.91■□□□□ 0.78
RPF1-202ENST00000370656 KIF6Q6ZMV9 814 aa19.91■□□□□ 0.78
RPF1-202ENST00000370656 PNISRQ8TF01 805 aaKnown RBP19.91■□□□□ 0.78
RPF1-202ENST00000370656 HSPA8P11142 646 aaKnown RBP19.9■□□□□ 0.78
RPF1-202ENST00000370656 NUTM1Q86Y26 1132 aa19.9■□□□□ 0.78
RPF1-202ENST00000370656 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
RPF1-202ENST00000370656 DDX21Q9NR30 783 aaKnown RBP eCLIP19.9■□□□□ 0.78
RPF1-202ENST00000370656 TRPM7Q96QT4 1865 aa19.9■□□□□ 0.78
RPF1-202ENST00000370656 HOXA10P31260 410 aaPredicted RBP19.89■□□□□ 0.77
RPF1-202ENST00000370656 RIC1Q4ADV7 1423 aa19.89■□□□□ 0.77
RPF1-202ENST00000370656 MAP3K15Q6ZN16 1313 aa19.89■□□□□ 0.77
RPF1-202ENST00000370656 LARGE2Q8N3Y3 721 aa19.89■□□□□ 0.77
RPF1-202ENST00000370656 SNED1Q8TER0 1413 aa19.89■□□□□ 0.77
RPF1-202ENST00000370656 ABCC12Q96J65 1359 aa19.89■□□□□ 0.77
RPF1-202ENST00000370656 BEGAINQ9BUH8 593 aa19.89■□□□□ 0.77
RPF1-202ENST00000370656 TMX4Q9H1E5 349 aaPredicted RBP19.89■□□□□ 0.77
RPF1-202ENST00000370656 PRKRIP1Q9H875 184 aaPredicted RBP19.89■□□□□ 0.77
RPF1-202ENST00000370656 DLG5Q8TDM6 1919 aa19.88■□□□□ 0.77
RPF1-202ENST00000370656 IBTKQ9P2D0 1353 aaPredicted RBP19.88■□□□□ 0.77
RPF1-202ENST00000370656 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
RPF1-202ENST00000370656 ECE1P42892 770 aa19.88■□□□□ 0.77
RPF1-202ENST00000370656 RBM17Q96I25 401 aaKnown RBP19.88■□□□□ 0.77
RPF1-202ENST00000370656 MIS18AQ9NYP9 233 aa19.88■□□□□ 0.77
RPF1-202ENST00000370656 KDM3BQ7LBC6 1761 aa19.88■□□□□ 0.77
RPF1-202ENST00000370656 PAXIP1Q6ZW49 1069 aaPredicted RBP19.87■□□□□ 0.77
RPF1-202ENST00000370656 USP50Q70EL3 339 aaPredicted RBP19.87■□□□□ 0.77
RPF1-202ENST00000370656 RRP7AQ9Y3A4 280 aaKnown RBP19.87■□□□□ 0.77
RPF1-202ENST00000370656 NIM1KQ8IY84 436 aa19.86■□□□□ 0.77
RPF1-202ENST00000370656 CRAMP1Q96RY5 1269 aa19.86■□□□□ 0.77
RPF1-202ENST00000370656 LTBP1Q14766 1721 aa19.85■□□□□ 0.77
RPF1-202ENST00000370656 THSD7BQ9C0I4 1608 aa19.85■□□□□ 0.77
RPF1-202ENST00000370656 CCDC85CA6NKD9 419 aa19.85■□□□□ 0.77
RPF1-202ENST00000370656 PPEF1O14829 653 aaPredicted RBP19.85■□□□□ 0.77
RPF1-202ENST00000370656 GPTP24298 496 aa19.85■□□□□ 0.77
RPF1-202ENST00000370656 SCNN1DP51172 638 aa19.85■□□□□ 0.77
RPF1-202ENST00000370656 CAPNS2Q96L46 248 aa19.85■□□□□ 0.77
RPF1-202ENST00000370656 COL4A5P29400 1685 aa19.84■□□□□ 0.77
RPF1-202ENST00000370656 MYL6BP14649 208 aa19.84■□□□□ 0.77
RPF1-202ENST00000370656 EPS15P42566 896 aa19.84■□□□□ 0.77
RPF1-202ENST00000370656 MLLT1Q03111 559 aaPredicted RBP19.84■□□□□ 0.77
RPF1-202ENST00000370656 PPP1R42Q7Z4L9 355 aa19.84■□□□□ 0.77
RPF1-202ENST00000370656 TTLL7Q6ZT98 887 aa19.83■□□□□ 0.77
RPF1-202ENST00000370656 GPR101Q96P66 508 aaPredicted RBP19.83■□□□□ 0.77
RPF1-202ENST00000370656 VPS33BQ9H267 617 aa19.83■□□□□ 0.77
RPF1-202ENST00000370656 ZBTB3Q9H5J0 574 aa19.83■□□□□ 0.77
RPF1-202ENST00000370656 UBN2Q6ZU65 1347 aa19.82■□□□□ 0.76
RPF1-202ENST00000370656 TCERG1O14776 1098 aaKnown RBP19.82■□□□□ 0.76
RPF1-202ENST00000370656 PPIP5K2O43314 1243 aa19.82■□□□□ 0.76
RPF1-202ENST00000370656 EIF4A1P60842 406 aaKnown RBP19.82■□□□□ 0.76
RPF1-202ENST00000370656 GRM1Q13255 1194 aa19.82■□□□□ 0.76
RPF1-202ENST00000370656 SUSD4Q5VX71 490 aa19.82■□□□□ 0.76
RPF1-202ENST00000370656 NLRP3Q96P20 1036 aa19.82■□□□□ 0.76
RPF1-202ENST00000370656 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
RPF1-202ENST00000370656 PARP10Q53GL7 1025 aa19.81■□□□□ 0.76
RPF1-202ENST00000370656 GIGYF2Q6Y7W6 1299 aaKnown RBP19.81■□□□□ 0.76
RPF1-202ENST00000370656 ZNF34Q8IZ26 560 aa19.81■□□□□ 0.76
RPF1-202ENST00000370656 SUPT20HQ8NEM7 779 aa19.81■□□□□ 0.76
RPF1-202ENST00000370656 ADARB2Q9NS39 739 aaKnown RBP19.81■□□□□ 0.76
RPF1-202ENST00000370656 NTSR2O95665 410 aa19.8■□□□□ 0.76
RPF1-202ENST00000370656 CYP4F22Q6NT55 531 aa19.8■□□□□ 0.76
RPF1-202ENST00000370656 TLL2Q9Y6L7 1015 aa19.8■□□□□ 0.76
RPF1-202ENST00000370656 MAP2K2P36507 400 aa19.79■□□□□ 0.76
RPF1-202ENST00000370656 RALBP1Q15311 655 aa19.79■□□□□ 0.76
RPF1-202ENST00000370656 PNNQ9H307 717 aaKnown RBP19.79■□□□□ 0.76
RPF1-202ENST00000370656 GPRC5DQ9NZD1 345 aa19.79■□□□□ 0.76
RPF1-202ENST00000370656 ATP6V0A2Q9Y487 856 aa19.79■□□□□ 0.76
RPF1-202ENST00000370656 TRAF5O00463 557 aa19.78■□□□□ 0.76
RPF1-202ENST00000370656 FMR1Q06787 632 aaKnown RBP eCLIP19.78■□□□□ 0.76
RPF1-202ENST00000370656 AOC3Q16853 763 aa19.78■□□□□ 0.76
RPF1-202ENST00000370656 CST9Q5W186 159 aa19.78■□□□□ 0.76
RPF1-202ENST00000370656 CFAP44Q96MT7 982 aa19.78■□□□□ 0.76
RPF1-202ENST00000370656 ZNRF3Q9ULT6 936 aa19.78■□□□□ 0.76
RPF1-202ENST00000370656 NFE2L2Q16236 605 aa19.77■□□□□ 0.76
RPF1-202ENST00000370656 UTP14AQ9BVJ6 771 aaKnown RBP19.77■□□□□ 0.76
RPF1-202ENST00000370656 CA12O43570 354 aa19.76■□□□□ 0.75
RPF1-202ENST00000370656 TSKSQ9UJT2 592 aa19.76■□□□□ 0.75
RPF1-202ENST00000370656 CDHR2Q9BYE9 1310 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms