RNA–Protein interactions for RNA: ENST00000370367.3

KHDC3L-201, Transcript of KH domain containing 3 like, subcortical maternal complex member, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KHDC3L, Length 1,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3L-201ENST00000370367 HOXA10P31260 410 aaPredicted RBP27.02■■□□□ 1.92
KHDC3L-201ENST00000370367 CCDC93Q567U6 631 aa27.02■■□□□ 1.92
KHDC3L-201ENST00000370367 SLC10A5Q5PT55 438 aa27.02■■□□□ 1.92
KHDC3L-201ENST00000370367 ZNF219Q9P2Y4 722 aaPredicted RBP27.02■■□□□ 1.92
KHDC3L-201ENST00000370367 ANKRD13DQ6ZTN6 518 aa27.01■■□□□ 1.91
KHDC3L-201ENST00000370367 NLRP10Q86W26 655 aa27.01■■□□□ 1.91
KHDC3L-201ENST00000370367 SLX4Q8IY92 1834 aa27.01■■□□□ 1.91
KHDC3L-201ENST00000370367 RPGRQ92834 1020 aaKnown RBP27■■□□□ 1.91
KHDC3L-201ENST00000370367 TNRC6CQ9HCJ0 1690 aaKnown RBP26.99■■□□□ 1.91
KHDC3L-201ENST00000370367 C8orf58Q8NAV2 365 aa26.99■■□□□ 1.91
KHDC3L-201ENST00000370367 FER1L6Q2WGJ9 1857 aa26.98■■□□□ 1.91
KHDC3L-201ENST00000370367 RTKN2Q8IZC4 609 aa26.98■■□□□ 1.91
KHDC3L-201ENST00000370367 NLRP3Q96P20 1036 aa26.98■■□□□ 1.91
KHDC3L-201ENST00000370367 NMRK2Q9NPI5 230 aa26.98■■□□□ 1.91
KHDC3L-201ENST00000370367 CCDC30Q5VVM6 783 aa26.97■■□□□ 1.91
KHDC3L-201ENST00000370367 CC2D2BQ6DHV5 1058 aa26.97■■□□□ 1.91
KHDC3L-201ENST00000370367 RBM17Q96I25 401 aaKnown RBP26.97■■□□□ 1.91
KHDC3L-201ENST00000370367 CRAMP1Q96RY5 1269 aa26.97■■□□□ 1.91
KHDC3L-201ENST00000370367 GLTPD2A6NH11 291 aa26.96■■□□□ 1.91
KHDC3L-201ENST00000370367 ELL2O00472 640 aaPredicted RBP26.96■■□□□ 1.91
KHDC3L-201ENST00000370367 TOMM70O94826 608 aa26.96■■□□□ 1.91
KHDC3L-201ENST00000370367 SH3TC1Q8TE82 1336 aa26.95■■□□□ 1.91
KHDC3L-201ENST00000370367 FKBP4Q02790 459 aaKnown RBP eCLIP26.95■■□□□ 1.9
KHDC3L-201ENST00000370367 GOLGA2Q08379 1002 aa26.95■■□□□ 1.9
KHDC3L-201ENST00000370367 GRIPAP1Q4V328 841 aa26.95■■□□□ 1.9
KHDC3L-201ENST00000370367 WDR63Q8IWG1 891 aa26.95■■□□□ 1.9
KHDC3L-201ENST00000370367 ISCA1Q9BUE6 129 aa26.95■■□□□ 1.9
KHDC3L-201ENST00000370367 TRMT112Q9UI30 125 aaKnown RBP26.95■■□□□ 1.9
KHDC3L-201ENST00000370367 ANKRD36CQ5JPF3 1778 aa26.94■■□□□ 1.9
KHDC3L-201ENST00000370367 SENP3-EIF4A1A0A087X0R7 540 aa26.94■■□□□ 1.9
KHDC3L-201ENST00000370367 TRIM28Q13263 835 aaKnown RBP26.94■■□□□ 1.9
KHDC3L-201ENST00000370367 TSR2Q969E8 191 aaKnown RBP26.94■■□□□ 1.9
KHDC3L-201ENST00000370367 DPY19L2Q6NUT2 758 aa26.92■■□□□ 1.9
KHDC3L-201ENST00000370367 C3orf67Q6ZVT6 689 aa26.92■■□□□ 1.9
KHDC3L-201ENST00000370367 SNED1Q8TER0 1413 aa26.91■■□□□ 1.9
KHDC3L-201ENST00000370367 TSPYL6Q8N831 410 aa26.91■■□□□ 1.9
KHDC3L-201ENST00000370367 PSMD1Q99460 953 aa26.91■■□□□ 1.9
KHDC3L-201ENST00000370367 RIC3Q7Z5B4 369 aa26.9■■□□□ 1.9
KHDC3L-201ENST00000370367 C16orf71Q8IYS4 520 aaPredicted RBP26.9■■□□□ 1.9
KHDC3L-201ENST00000370367 RBM46Q8TBY0 533 aaKnown RBP26.9■■□□□ 1.9
KHDC3L-201ENST00000370367 PHAXQ9H814 394 aaKnown RBP26.9■■□□□ 1.9
KHDC3L-201ENST00000370367 TIAM2Q8IVF5 1701 aa26.9■■□□□ 1.9
KHDC3L-201ENST00000370367 DDX58O95786 925 aaKnown RBP26.89■■□□□ 1.9
KHDC3L-201ENST00000370367 RRAGCQ9HB90 399 aa26.89■■□□□ 1.9
KHDC3L-201ENST00000370367 CACNA1SQ13698 1873 aa26.89■■□□□ 1.89
KHDC3L-201ENST00000370367 PPEF1O14829 653 aaPredicted RBP26.88■■□□□ 1.89
KHDC3L-201ENST00000370367 TWISTNBQ3B726 338 aaPredicted RBP26.88■■□□□ 1.89
KHDC3L-201ENST00000370367 OLFM4Q6UX06 510 aa26.88■■□□□ 1.89
KHDC3L-201ENST00000370367 FAM9BQ8IZU0 186 aa26.88■■□□□ 1.89
KHDC3L-201ENST00000370367 STK31Q9BXU1 1019 aa26.88■■□□□ 1.89
KHDC3L-201ENST00000370367 HCLS1P14317 486 aaPredicted RBP26.87■■□□□ 1.89
KHDC3L-201ENST00000370367 VEGFAP15692 232 aaPredicted RBP26.87■■□□□ 1.89
KHDC3L-201ENST00000370367 HSPA6P17066 643 aa26.87■■□□□ 1.89
KHDC3L-201ENST00000370367 FANCIQ9NVI1 1328 aa26.87■■□□□ 1.89
KHDC3L-201ENST00000370367 ATP5J2-PTCD1G3V325 749 aa26.86■■□□□ 1.89
KHDC3L-201ENST00000370367 DICER1Q9UPY3 1922 aaKnown RBP26.86■■□□□ 1.89
KHDC3L-201ENST00000370367 ABCC4O15439 1325 aa26.86■■□□□ 1.89
KHDC3L-201ENST00000370367 BBOX1O75936 387 aa26.85■■□□□ 1.89
KHDC3L-201ENST00000370367 SYNE4Q8N205 404 aa26.85■■□□□ 1.89
KHDC3L-201ENST00000370367 TMX4Q9H1E5 349 aaPredicted RBP26.85■■□□□ 1.89
KHDC3L-201ENST00000370367 ZNF277Q9NRM2 450 aaPredicted RBP26.85■■□□□ 1.89
KHDC3L-201ENST00000370367 HSP90B1P14625 803 aaKnown RBP26.84■■□□□ 1.89
KHDC3L-201ENST00000370367 IARSP41252 1262 aaKnown RBP26.84■■□□□ 1.89
KHDC3L-201ENST00000370367 FSTL1Q12841 308 aa26.84■■□□□ 1.89
KHDC3L-201ENST00000370367 DDX46Q7L014 1031 aaKnown RBP26.84■■□□□ 1.89
KHDC3L-201ENST00000370367 ATP6V0A2Q9Y487 856 aa26.84■■□□□ 1.89
KHDC3L-201ENST00000370367 CCDC191Q8NCU4 936 aa26.83■■□□□ 1.89
KHDC3L-201ENST00000370367 FAM89AQ96GI7 184 aa26.83■■□□□ 1.89
KHDC3L-201ENST00000370367 METTL22Q9BUU2 404 aaPredicted RBP26.83■■□□□ 1.89
KHDC3L-201ENST00000370367 CCDC88AQ3V6T2 1871 aa26.83■■□□□ 1.88
KHDC3L-201ENST00000370367 SF3B3Q15393 1217 aaKnown RBP26.82■■□□□ 1.88
KHDC3L-201ENST00000370367 TMC4Q7Z404 712 aa26.82■■□□□ 1.88
KHDC3L-201ENST00000370367 ZBTB38Q8NAP3 1195 aaPredicted RBP26.82■■□□□ 1.88
KHDC3L-201ENST00000370367 SALL2Q9Y467 1007 aaPredicted RBP26.82■■□□□ 1.88
KHDC3L-201ENST00000370367 WDR90Q96KV7 1748 aa26.82■■□□□ 1.88
KHDC3L-201ENST00000370367 GRAPQ13588 217 aa26.81■■□□□ 1.88
KHDC3L-201ENST00000370367 KSR2Q6VAB6 950 aa26.81■■□□□ 1.88
KHDC3L-201ENST00000370367 GRAPLQ8TC17 118 aaPredicted RBP26.81■■□□□ 1.88
KHDC3L-201ENST00000370367 MYD88Q99836 296 aa26.81■■□□□ 1.88
KHDC3L-201ENST00000370367 MYH16Q9H6N6 1097 aa26.81■■□□□ 1.88
KHDC3L-201ENST00000370367 VPS33BQ9H267 617 aa26.8■■□□□ 1.88
KHDC3L-201ENST00000370367 FZD9O00144 591 aa26.79■■□□□ 1.88
KHDC3L-201ENST00000370367 IRS4O14654 1257 aaPredicted RBP26.79■■□□□ 1.88
KHDC3L-201ENST00000370367 SP8Q8IXZ3 490 aa26.79■■□□□ 1.88
KHDC3L-201ENST00000370367 L3MBTL3Q96JM7 780 aaPredicted RBP26.79■■□□□ 1.88
KHDC3L-201ENST00000370367 CWC25Q9NXE8 425 aaPredicted RBP26.79■■□□□ 1.88
KHDC3L-201ENST00000370367 MAP3K2Q9Y2U5 619 aa26.79■■□□□ 1.88
KHDC3L-201ENST00000370367 POTECB2RU33 542 aa26.78■■□□□ 1.88
KHDC3L-201ENST00000370367 SLC4A2P04920 1241 aa26.78■■□□□ 1.88
KHDC3L-201ENST00000370367 PCCAP05165 728 aaPredicted RBP26.78■■□□□ 1.88
KHDC3L-201ENST00000370367 SMC1BQ8NDV3 1235 aa26.78■■□□□ 1.88
KHDC3L-201ENST00000370367 JDP2Q8WYK2 163 aa26.78■■□□□ 1.88
KHDC3L-201ENST00000370367 PI4KAP2A4QPH2 592 aa26.77■■□□□ 1.88
KHDC3L-201ENST00000370367 VAMP4O75379 141 aa26.77■■□□□ 1.88
KHDC3L-201ENST00000370367 DDNO94850 711 aaPredicted RBP26.77■■□□□ 1.88
KHDC3L-201ENST00000370367 PI4KAP1Q8N8J0 262 aa26.77■■□□□ 1.88
KHDC3L-201ENST00000370367 SUPT20HQ8NEM7 779 aa26.77■■□□□ 1.88
KHDC3L-201ENST00000370367 RTFDC1Q9BY42 306 aaPredicted RBP26.77■■□□□ 1.88
KHDC3L-201ENST00000370367 ZNF521Q96K83 1311 aa26.76■■□□□ 1.87
KHDC3L-201ENST00000370367 IQCA1LA6NCM1 817 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms