RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 ABCC5O15440 1437 aa20.69■□□□□ 0.9
SNX27-203ENST00000368843 PRC1O43663 620 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 SNRPA1P09661 255 aaKnown RBP20.68■□□□□ 0.9
SNX27-203ENST00000368843 TSPY3P0CV98 308 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 TSPY8P0CW00 308 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 PICALMQ13492 652 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 FSIP1Q8NA03 581 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 FAM83GA6ND36 823 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 TRERF1Q96PN7 1200 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 HOOK3Q86VS8 718 aa20.68■□□□□ 0.9
SNX27-203ENST00000368843 ZSCAN12O43309 604 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 IARSP41252 1262 aaKnown RBP20.67■□□□□ 0.9
SNX27-203ENST00000368843 HDAC9Q9UKV0 1011 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 LIMCH1Q9UPQ0 1083 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 ACEP12821 1306 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 CRACR2AQ9BSW2 395 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 CUL7Q14999 1698 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 IFFO1Q0D2I5 559 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 STXBP4Q6ZWJ1 553 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 CBX1P83916 185 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 TSHZ3Q63HK5 1081 aa20.67■□□□□ 0.9
SNX27-203ENST00000368843 GJB2P29033 226 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 CADPS2Q86UW7 1296 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 PIK3R4Q99570 1358 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 PI4KAP2A4QPH2 592 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 PI4KAP1Q8N8J0 262 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 KAT6BQ8WYB5 2073 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 PLEKHH1Q9ULM0 1364 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 USO1O60763 962 aaKnown RBP20.66■□□□□ 0.9
SNX27-203ENST00000368843 C16orf71Q8IYS4 520 aaPredicted RBP20.66■□□□□ 0.9
SNX27-203ENST00000368843 BIN1O00499 593 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 ANXA1P04083 346 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 UBE4AQ14139 1066 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 PLCD3Q8N3E9 789 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 KIF4BQ2VIQ3 1234 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 UBXN4Q92575 508 aa20.66■□□□□ 0.9
SNX27-203ENST00000368843 STX8Q9UNK0 236 aa20.65■□□□□ 0.9
SNX27-203ENST00000368843 IQSEC3Q9UPP2 1182 aaPredicted RBP20.65■□□□□ 0.9
SNX27-203ENST00000368843 YEATS4O95619 227 aa20.65■□□□□ 0.9
SNX27-203ENST00000368843 NCOA7Q8NI08 942 aa20.65■□□□□ 0.9
SNX27-203ENST00000368843 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
SNX27-203ENST00000368843 ECHDC1Q9NTX5 307 aa20.65■□□□□ 0.9
SNX27-203ENST00000368843 TRMT1Q9NXH9 659 aaKnown RBP20.65■□□□□ 0.9
SNX27-203ENST00000368843 C20orf194Q5TEA3 1177 aa20.65■□□□□ 0.9
SNX27-203ENST00000368843 CLIP2Q9UDT6 1046 aa20.65■□□□□ 0.9
SNX27-203ENST00000368843 PLS1Q14651 629 aa20.64■□□□□ 0.9
SNX27-203ENST00000368843 TMCO5BA8MYB1 307 aa20.64■□□□□ 0.89
SNX27-203ENST00000368843 PTPN14Q15678 1187 aa20.64■□□□□ 0.89
SNX27-203ENST00000368843 SERPINA10Q9UK55 444 aa20.64■□□□□ 0.89
SNX27-203ENST00000368843 DENND4BO75064 1496 aaPredicted RBP20.64■□□□□ 0.89
SNX27-203ENST00000368843 TICAM2Q86XR7 235 aa20.64■□□□□ 0.89
SNX27-203ENST00000368843 CYP7A1P22680 504 aa20.63■□□□□ 0.89
SNX27-203ENST00000368843 TERF1P54274 439 aa20.63■□□□□ 0.89
SNX27-203ENST00000368843 PRPF4BQ13523 1007 aaKnown RBP20.63■□□□□ 0.89
SNX27-203ENST00000368843 SRRTQ9BXP5 876 aaKnown RBP20.63■□□□□ 0.89
SNX27-203ENST00000368843 UQCRFS1P1P0C7P4 283 aa20.63■□□□□ 0.89
SNX27-203ENST00000368843 ANKRD13DQ6ZTN6 518 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 MBIPQ9NS73 344 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 HMGXB3Q12766 1538 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 TBCAO75347 108 aaKnown RBP20.62■□□□□ 0.89
SNX27-203ENST00000368843 IFIT1BQ5T764 474 aaKnown RBP20.62■□□□□ 0.89
SNX27-203ENST00000368843 TFIP11Q9UBB9 837 aaKnown RBP20.62■□□□□ 0.89
SNX27-203ENST00000368843 OGFOD1Q8N543 542 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 NEK1Q96PY6 1258 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 SLC4A4Q9Y6R1 1079 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 FANCAO15360 1455 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 CHPF2Q9P2E5 772 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 POLR3GO15318 223 aaPredicted RBP20.62■□□□□ 0.89
SNX27-203ENST00000368843 CTAGE5O15320 804 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 TOM1O60784 492 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 URI1O94763 535 aaPredicted RBP20.62■□□□□ 0.89
SNX27-203ENST00000368843 UBA7P41226 1012 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 RBM26Q5T8P6 1007 aaKnown RBP20.62■□□□□ 0.89
SNX27-203ENST00000368843 ZNF354CQ86Y25 554 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 CCDC174Q6PII3 467 aa20.62■□□□□ 0.89
SNX27-203ENST00000368843 NOP2P46087 812 aaKnown RBP20.61■□□□□ 0.89
SNX27-203ENST00000368843 VEZTQ9HBM0 779 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 PRXQ9BXM0 1461 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 STAMBPO95630 424 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 TRIM27P14373 513 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 HEATR3Q7Z4Q2 680 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 LMAN1P49257 510 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 WTAPQ15007 396 aa20.61■□□□□ 0.89
SNX27-203ENST00000368843 ORC3Q9UBD5 711 aaPredicted RBP20.61■□□□□ 0.89
SNX27-203ENST00000368843 EXOC1Q9NV70 894 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 GCOM1H8Y6P7 765 aaPredicted RBP20.6■□□□□ 0.89
SNX27-203ENST00000368843 MYZAPP0CAP1 466 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 NCOA1Q15788 1441 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 FAM114A1Q8IWE2 563 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 ZGPATQ8N5A5 531 aaKnown RBP20.6■□□□□ 0.89
SNX27-203ENST00000368843 PUS7Q96PZ0 661 aaKnown RBP20.6■□□□□ 0.89
SNX27-203ENST00000368843 GDPD2Q9HCC8 539 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 PAFAH1B1P43034 410 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 MAP9Q49MG5 647 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 GBP3Q9H0R5 595 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 WDR70Q9NW82 654 aa20.6■□□□□ 0.89
SNX27-203ENST00000368843 NIP7Q9Y221 180 aaKnown RBP eCLIP20.6■□□□□ 0.89
SNX27-203ENST00000368843 MAP3K9P80192 1104 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 156.2 ms