RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 PIBF1Q8WXW3 757 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 KLHL40Q2TBA0 621 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 KRT222Q8N1A0 295 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 ADGBQ8N7X0 1667 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 DDX46Q7L014 1031 aaKnown RBP15.42■□□□□ 0.06
PTPRK-204ENST00000368210 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
PTPRK-204ENST00000368210 GOLGA8BA8MQT2 603 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 TNNT1P13805 278 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 PLEKHM2Q8IWE5 1019 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 DYDC1Q8WWB3 177 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 ATP10AO60312 1499 aa15.42■□□□□ 0.06
PTPRK-204ENST00000368210 SMTNL1A8MU46 457 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 SEC24BO95487 1268 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 C19orf44Q9H6X5 657 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 RRAGDQ9NQL2 400 aaPredicted RBP15.41■□□□□ 0.06
PTPRK-204ENST00000368210 TFIP11Q9UBB9 837 aaKnown RBP15.41■□□□□ 0.06
PTPRK-204ENST00000368210 VGLL3A8MV65 326 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 KIF2AO00139 706 aaPredicted RBP15.41■□□□□ 0.06
PTPRK-204ENST00000368210 BRD2P25440 801 aaKnown RBP15.41■□□□□ 0.06
PTPRK-204ENST00000368210 LMBR1LQ6UX01 489 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 IP6K1Q92551 441 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 PLCD4Q9BRC7 762 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 CEP131Q9UPN4 1083 aa15.41■□□□□ 0.06
PTPRK-204ENST00000368210 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 TERF1P54274 439 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 TTF1Q15361 905 aaPredicted RBP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 TXLNBQ8N3L3 684 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 CCDC82Q8N4S0 544 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 NFATC2IPQ8NCF5 419 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 ZNHIT6Q9NWK9 470 aaKnown RBP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 SLC12A7Q9Y666 1083 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 RNF41Q9H4P4 317 aaPredicted RBP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 PA2G4Q9UQ80 394 aaKnown RBP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 SOS1Q07889 1333 aaPredicted RBP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 IFIT3O14879 490 aaKnown RBP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 RBM5P52756 815 aaKnown RBP eCLIP15.4■□□□□ 0.06
PTPRK-204ENST00000368210 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 UBXN4Q92575 508 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 ANO10Q9NW15 660 aa15.4■□□□□ 0.06
PTPRK-204ENST00000368210 USP5P45974 858 aa15.39■□□□□ 0.05
PTPRK-204ENST00000368210 HAND2P61296 217 aa15.39■□□□□ 0.05
PTPRK-204ENST00000368210 CABLES1Q8TDN4 633 aa15.39■□□□□ 0.05
PTPRK-204ENST00000368210 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
PTPRK-204ENST00000368210 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
PTPRK-204ENST00000368210 CFAP65Q6ZU64 1925 aaKnown RBP15.39■□□□□ 0.05
PTPRK-204ENST00000368210 KDM2BQ8NHM5 1336 aa15.39■□□□□ 0.05
PTPRK-204ENST00000368210 RANBP6O60518 1105 aaKnown RBP15.39■□□□□ 0.05
PTPRK-204ENST00000368210 CKAP2LQ8IYA6 745 aa15.39■□□□□ 0.05
PTPRK-204ENST00000368210 ZNF287Q9HBT7 754 aa15.39■□□□□ 0.05
PTPRK-204ENST00000368210 DDX19AQ9NUU7 478 aaKnown RBP15.39■□□□□ 0.05
PTPRK-204ENST00000368210 CHL1O00533 1208 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 CWF19L2Q2TBE0 894 aaKnown RBP15.38■□□□□ 0.05
PTPRK-204ENST00000368210 CTCFLQ8NI51 663 aaPredicted RBP15.38■□□□□ 0.05
PTPRK-204ENST00000368210 MKNK2Q9HBH9 465 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 USP16Q9Y5T5 823 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 G2E3Q7L622 706 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 DZIP1Q86YF9 867 aaKnown RBP15.38■□□□□ 0.05
PTPRK-204ENST00000368210 PHAXQ9H814 394 aaKnown RBP15.38■□□□□ 0.05
PTPRK-204ENST00000368210 KDM6BO15054 1643 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 CT47A1Q5JQC4 288 aaPredicted RBP15.38■□□□□ 0.05
PTPRK-204ENST00000368210 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 CDC5LQ99459 802 aaKnown RBP15.38■□□□□ 0.05
PTPRK-204ENST00000368210 ANKIB1Q9P2G1 1089 aa15.38■□□□□ 0.05
PTPRK-204ENST00000368210 GOLGA6L7A0A1B0GV03 622 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 GOLGA8AA7E2F4 631 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 NEFHP12036 1026 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 CFAP100Q494V2 611 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 BRF1Q92994 677 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 ABCA8O94911 1581 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 CTAGE5O15320 804 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 UBE2HP62256 183 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 BMS1Q14692 1282 aaKnown RBP15.37■□□□□ 0.05
PTPRK-204ENST00000368210 NECAB1Q8N987 351 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 TCEANC2Q96MN5 208 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 SBNO1A3KN83 1393 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 SBNO2Q9Y2G9 1366 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 TTC41PQ6P2S7 1318 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 SKIDA1Q1XH10 827 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 FEZ1Q99689 392 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 ZHX3Q9H4I2 956 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 POLR3DP05423 398 aaPredicted RBP15.37■□□□□ 0.05
PTPRK-204ENST00000368210 IL15P40933 162 aaPredicted RBP15.37■□□□□ 0.05
PTPRK-204ENST00000368210 RBM25P49756 843 aaKnown RBP15.37■□□□□ 0.05
PTPRK-204ENST00000368210 HS1BP3Q53T59 392 aa15.37■□□□□ 0.05
PTPRK-204ENST00000368210 ZSCAN22P10073 491 aaPredicted RBP15.36■□□□□ 0.05
PTPRK-204ENST00000368210 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
PTPRK-204ENST00000368210 ORC3Q9UBD5 711 aaPredicted RBP15.36■□□□□ 0.05
PTPRK-204ENST00000368210 MNAT1P51948 309 aa15.36■□□□□ 0.05
PTPRK-204ENST00000368210 RNMTO43148 476 aaKnown RBP15.36■□□□□ 0.05
PTPRK-204ENST00000368210 NCOA7Q8NI08 942 aa15.36■□□□□ 0.05
PTPRK-204ENST00000368210 RBM27Q9P2N5 1060 aaKnown RBP15.36■□□□□ 0.05
PTPRK-204ENST00000368210 HMGB2P26583 209 aaKnown RBP15.36■□□□□ 0.05
PTPRK-204ENST00000368210 FSIP1Q8NA03 581 aa15.36■□□□□ 0.05
PTPRK-204ENST00000368210 ZFYP08048 801 aaPredicted RBP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 RASSF4Q9H2L5 321 aa15.35■□□□□ 0.05
PTPRK-204ENST00000368210 BMP2KQ9NSY1 1161 aaPredicted RBP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
PTPRK-204ENST00000368210 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms