RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 DLEC1Q9Y238 1755 aa25.56■■□□□ 1.68
H3F3A-204ENST00000366816 SLFN5Q08AF3 891 aa25.55■■□□□ 1.68
H3F3A-204ENST00000366816 STYK1Q6J9G0 422 aa25.55■■□□□ 1.68
H3F3A-204ENST00000366816 MASTLQ96GX5 879 aa25.55■■□□□ 1.68
H3F3A-204ENST00000366816 ISCA1Q9BUE6 129 aa25.55■■□□□ 1.68
H3F3A-204ENST00000366816 TRMT112Q9UI30 125 aaKnown RBP25.55■■□□□ 1.68
H3F3A-204ENST00000366816 IBTKQ9P2D0 1353 aaPredicted RBP25.55■■□□□ 1.68
H3F3A-204ENST00000366816 E9PSI1 815 aa25.54■■□□□ 1.68
H3F3A-204ENST00000366816 C3orf67Q6ZVT6 689 aa25.54■■□□□ 1.68
H3F3A-204ENST00000366816 MYD88Q99836 296 aa25.54■■□□□ 1.68
H3F3A-204ENST00000366816 ANKRD36CQ5JPF3 1778 aa25.54■■□□□ 1.68
H3F3A-204ENST00000366816 TNRC6CQ9HCJ0 1690 aaKnown RBP25.53■■□□□ 1.68
H3F3A-204ENST00000366816 DDX58O95786 925 aaKnown RBP25.53■■□□□ 1.68
H3F3A-204ENST00000366816 NPR1P16066 1061 aa25.53■■□□□ 1.68
H3F3A-204ENST00000366816 MAP3K2Q9Y2U5 619 aa25.53■■□□□ 1.68
H3F3A-204ENST00000366816 ARFGEF2Q9Y6D5 1785 aa25.52■■□□□ 1.68
H3F3A-204ENST00000366816 ARFGEF1Q9Y6D6 1849 aa25.52■■□□□ 1.68
H3F3A-204ENST00000366816 PI4KAP2A4QPH2 592 aa25.52■■□□□ 1.68
H3F3A-204ENST00000366816 HCLS1P14317 486 aaPredicted RBP25.52■■□□□ 1.68
H3F3A-204ENST00000366816 PI4KAP1Q8N8J0 262 aa25.52■■□□□ 1.68
H3F3A-204ENST00000366816 CNKSR1Q969H4 720 aa25.52■■□□□ 1.68
H3F3A-204ENST00000366816 C21orf2O43822 256 aa25.51■■□□□ 1.67
H3F3A-204ENST00000366816 RTL5Q5HYW3 569 aaPredicted RBP25.51■■□□□ 1.67
H3F3A-204ENST00000366816 SLC10A5Q5PT55 438 aa25.51■■□□□ 1.67
H3F3A-204ENST00000366816 PRPF40BQ6NWY9 871 aaKnown RBP25.51■■□□□ 1.67
H3F3A-204ENST00000366816 KSR2Q6VAB6 950 aa25.51■■□□□ 1.67
H3F3A-204ENST00000366816 FLIIQ13045 1269 aa25.5■■□□□ 1.67
H3F3A-204ENST00000366816 CRY2Q49AN0 593 aa25.5■■□□□ 1.67
H3F3A-204ENST00000366816 FAM89AQ96GI7 184 aa25.5■■□□□ 1.67
H3F3A-204ENST00000366816 METTL22Q9BUU2 404 aaPredicted RBP25.5■■□□□ 1.67
H3F3A-204ENST00000366816 ADCY9O60503 1353 aa25.49■■□□□ 1.67
H3F3A-204ENST00000366816 SH3TC1Q8TE82 1336 aa25.49■■□□□ 1.67
H3F3A-204ENST00000366816 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
H3F3A-204ENST00000366816 NLRP3Q96P20 1036 aa25.48■■□□□ 1.67
H3F3A-204ENST00000366816 SLX4Q8IY92 1834 aa25.48■■□□□ 1.67
H3F3A-204ENST00000366816 RASSF7Q02833 373 aa25.47■■□□□ 1.67
H3F3A-204ENST00000366816 JARID2Q92833 1246 aaPredicted RBP25.47■■□□□ 1.67
H3F3A-204ENST00000366816 RPGRQ92834 1020 aaKnown RBP25.47■■□□□ 1.67
H3F3A-204ENST00000366816 RIC1Q4ADV7 1423 aa25.46■■□□□ 1.67
H3F3A-204ENST00000366816 RNF123Q5XPI4 1314 aa25.46■■□□□ 1.67
H3F3A-204ENST00000366816 HNRNPUQ00839 825 aaKnown RBP eCLIP25.46■■□□□ 1.67
H3F3A-204ENST00000366816 FKBP5Q13451 457 aaPredicted RBP25.46■■□□□ 1.67
H3F3A-204ENST00000366816 OLFM4Q6UX06 510 aa25.46■■□□□ 1.67
H3F3A-204ENST00000366816 TRMT2AQ8IZ69 625 aaKnown RBP25.46■■□□□ 1.67
H3F3A-204ENST00000366816 ZNF784Q8NCA9 323 aaPredicted RBP25.46■■□□□ 1.67
H3F3A-204ENST00000366816 CACNA1SQ13698 1873 aa25.45■■□□□ 1.67
H3F3A-204ENST00000366816 IGKV5-2P06315 115 aa25.44■■□□□ 1.66
H3F3A-204ENST00000366816 ALDH1B1P30837 517 aa25.44■■□□□ 1.66
H3F3A-204ENST00000366816 C9orf131Q5VYM1 1079 aa25.44■■□□□ 1.66
H3F3A-204ENST00000366816 C7orf43Q8WVR3 580 aa25.44■■□□□ 1.66
H3F3A-204ENST00000366816 NFKBIEO00221 500 aa25.43■■□□□ 1.66
H3F3A-204ENST00000366816 HOXA10P31260 410 aaPredicted RBP25.43■■□□□ 1.66
H3F3A-204ENST00000366816 PRELPP51888 382 aa25.43■■□□□ 1.66
H3F3A-204ENST00000366816 CWF19L2Q2TBE0 894 aaKnown RBP25.43■■□□□ 1.66
H3F3A-204ENST00000366816 CCDC191Q8NCU4 936 aa25.43■■□□□ 1.66
H3F3A-204ENST00000366816 RBM17Q96I25 401 aaKnown RBP25.43■■□□□ 1.66
H3F3A-204ENST00000366816 CWC25Q9NXE8 425 aaPredicted RBP25.43■■□□□ 1.66
H3F3A-204ENST00000366816 SLC51AQ86UW1 340 aa25.42■■□□□ 1.66
H3F3A-204ENST00000366816 F6X3S4 739 aa25.41■■□□□ 1.66
H3F3A-204ENST00000366816 IRS4O14654 1257 aaPredicted RBP25.41■■□□□ 1.66
H3F3A-204ENST00000366816 NEXNQ0ZGT2 675 aa25.41■■□□□ 1.66
H3F3A-204ENST00000366816 ZBTB38Q8NAP3 1195 aaPredicted RBP25.41■■□□□ 1.66
H3F3A-204ENST00000366816 DNAAF4Q8WXU2 420 aa25.41■■□□□ 1.66
H3F3A-204ENST00000366816 CRAMP1Q96RY5 1269 aa25.4■■□□□ 1.66
H3F3A-204ENST00000366816 RNF181Q9P0P0 153 aa25.4■■□□□ 1.66
H3F3A-204ENST00000366816 NEURL1BA8MQ27 555 aa25.39■■□□□ 1.66
H3F3A-204ENST00000366816 MRPL50Q8N5N7 158 aaKnown RBP25.39■■□□□ 1.66
H3F3A-204ENST00000366816 ZNF526Q8TF50 670 aaPredicted RBP25.39■■□□□ 1.66
H3F3A-204ENST00000366816 SSH1Q8WYL5 1049 aa25.39■■□□□ 1.66
H3F3A-204ENST00000366816 BCL2L13Q9BXK5 485 aa25.39■■□□□ 1.66
H3F3A-204ENST00000366816 PCCAP05165 728 aaPredicted RBP25.38■■□□□ 1.65
H3F3A-204ENST00000366816 CACNA1FO60840 1977 aa25.37■■□□□ 1.65
H3F3A-204ENST00000366816 LAMB2P55268 1798 aa25.37■■□□□ 1.65
H3F3A-204ENST00000366816 DDX60Q8IY21 1712 aaKnown RBP25.37■■□□□ 1.65
H3F3A-204ENST00000366816 ABCC4O15439 1325 aa25.37■■□□□ 1.65
H3F3A-204ENST00000366816 LMNB1P20700 586 aa25.36■■□□□ 1.65
H3F3A-204ENST00000366816 CCDC93Q567U6 631 aa25.36■■□□□ 1.65
H3F3A-204ENST00000366816 SOGA3Q5TF21 947 aa25.36■■□□□ 1.65
H3F3A-204ENST00000366816 PPEF1O14829 653 aaPredicted RBP25.35■■□□□ 1.65
H3F3A-204ENST00000366816 DDX46Q7L014 1031 aaKnown RBP25.35■■□□□ 1.65
H3F3A-204ENST00000366816 TAOK3Q9H2K8 898 aa25.35■■□□□ 1.65
H3F3A-204ENST00000366816 SBF1O95248 1867 aa25.34■■□□□ 1.65
H3F3A-204ENST00000366816 GCKRQ14397 625 aa25.34■■□□□ 1.65
H3F3A-204ENST00000366816 SF3B3Q15393 1217 aaKnown RBP25.34■■□□□ 1.65
H3F3A-204ENST00000366816 LINS1Q8NG48 757 aa25.34■■□□□ 1.65
H3F3A-204ENST00000366816 FER1L6Q2WGJ9 1857 aa25.33■■□□□ 1.65
H3F3A-204ENST00000366816 BEND3Q5T5X7 828 aa25.32■■□□□ 1.64
H3F3A-204ENST00000366816 SLC4A10Q6U841 1118 aa25.32■■□□□ 1.64
H3F3A-204ENST00000366816 UBE3BQ7Z3V4 1068 aa25.32■■□□□ 1.64
H3F3A-204ENST00000366816 CCDC85AQ96PX6 553 aaPredicted RBP25.32■■□□□ 1.64
H3F3A-204ENST00000366816 H7C1W4 665 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 PDE8AO60658 829 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 GRAPQ13588 217 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 RTKN2Q8IZC4 609 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 GRAPLQ8TC17 118 aaPredicted RBP25.31■■□□□ 1.64
H3F3A-204ENST00000366816 SMC4Q9NTJ3 1288 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 TAF1P21675 1872 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 LTBP3Q9NS15 1303 aa25.31■■□□□ 1.64
H3F3A-204ENST00000366816 BBOX1O75936 387 aa25.3■■□□□ 1.64
H3F3A-204ENST00000366816 ALDH1L2Q3SY69 923 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms